Luidia clathrata (European starfish): 117300326
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Entry
117300326 CDS
T10152
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4-like
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arun03016
]
117300326
Enzymes [BR:
arun01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
117300326
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
117300326
Transfer RNA biogenesis [BR:
arun03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117300326
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_6
Kelch_1
Kelch_2
RAG2
Motif
Other DBs
NCBI-GeneID:
117300326
NCBI-ProteinID:
XP_033639966
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Position
15:complement(790407..800722)
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AA seq
732 aa
AA seq
DB search
MPRSAKGGNDTRVQGTNDSSIVSKCSITAQGYFQDEYLRLFVSKTARRSPLINRGYYIRA
RAVDDYLKQFLATNQDKQKQIISLGAGFDSAFFRLQSNGHLTNTTFYEVDFPDLVKRKGT
IIKSNEELSKLLINGKNVESNTQNGIYLTSENYYLLGVDLTDLNLLQRSLKQLGISSEAP
TFLLSECVLTYMRVSSSDALIQWAAESFPNAVFLTYEQIHPEDAFGCVMQKHFDKLNSRL
KAIGTYPTTEAQLLRLKNLGWQGITAVDMNSYNTTRVSLTERMRVERLEPFDEFEEWHLQ
CNHYAVIAGYNGDCAEMMEYFKQGHQMISTLKTSSVSILEDSTLTPLYSQPSSTVSTKPV
RRFGHASALLHLDKILVSGGFGETEGRHNRLGDFLLIDLKTKRLDEIPASPRIQELGPRM
HHTLTALSQDASFLIFGGRSSPTKPTNSTVIFNLDMKSPTTAEDELDQVRSTSLASSPSC
PNKSETITGVSQDGIKENTDILLDEDLSLRCPETISYTYLQVDLNDEAPNPRWRHSAIRA
VRKGQECVVIFGGRSSGDVIFGDCWCFDVNVLKWKQLDITGAQPTPPHSHTACLWQDSRM
VIAGGLSADLCPLNSVYVIDVESCVSQEIELTPTLSPRYSHTAHVVDDKLFLIGGINPHG
AHCYTISIVNLTAATSCEYSLPVFDIDRPLMFHGHTSELLSATKILIIGGGGNCFSFGTH
LNDTPILMGLPL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggtcagcaaaaggaggtaacgatacaagggttcaagggacaaatgacagcagt
attgtcagtaaatgttccattacagcccaaggatatttccaagatgagtatcttagactc
tttgtgtctaagacggctcgtcgatcaccgcttatcaacagaggttactacatcagggct
agagcagtcgatgattacttgaaacagttccttgctaccaatcaggataaacaaaaacag
atcatatccctgggggcgggtttcgactctgcgtttttcaggttacaatccaatggacac
ctgacaaacacgacattttatgaagtggactttcctgatttagtaaaaaggaaaggaacg
attatcaagagtaacgaggagctgagtaagcttctcataaatgggaagaatgtggagtcg
aatacacagaatggtatctacttgacatcagagaactactatcttctaggagttgatctg
actgatctcaacctactccaaagatccttgaaacaattgggcatcagcagtgaagcgcca
acctttctcttatcggagtgtgttctgacatacatgagagtatccagctctgatgctctt
atccagtgggctgctgagtctttccccaacgctgtgttcctgacatatgagcagatacat
cctgaggatgcttttggctgtgttatgcagaaacattttgacaaattaaactctcgtttg
aaggccatcggaacttaccccaccactgaagcgcagctgctgagattaaaaaacttggga
tggcaaggtataactgcagtggatatgaactcttacaacaccaccagagtctctctgact
gaaaggatgagagtagaacggctggaaccttttgatgaatttgaggaatggcatttgcag
tgcaatcattatgccgttattgctggttataatggggactgtgcggaaatgatggagtac
tttaaacaaggacatcaaatgatatcaaccctgaaaacaagctccgtatccatccttgaa
gactccaccctcacaccactatactcccaaccctcctccaccgtctccactaaacctgta
agacgctttggccatgctagtgctttgctccatctagacaagatattagtctcgggaggg
tttggagaaacagaaggaagacacaatagacttggagattttcttctcattgacttgaag
acgaagcgtttggatgaaattcctgcttctccaaggattcaggaactagggccgagaatg
catcacactctcacggctctctctcaagacgctagtttcctcatctttggtggacggagc
tctcccacaaaaccaacaaactccactgtcatttttaatcttgacatgaagtcaccaact
acagcagaagatgaactcgatcaagttagatcgacttcattggcaagctctccaagttgt
ccaaacaaatcagaaacaattactggggtctctcaggatggtatcaaggagaacacagac
attcttttggatgaagatttatcgttgagatgtcctgagacaataagttatacttatctt
caagtagacttaaacgatgaagcaccaaatccaagatggcgtcattcagcgattagagct
gttcgaaaaggccaggagtgtgttgtgatatttggtggcagaagttctggagatgttatt
tttggagactgctggtgttttgatgtcaatgttctaaaatggaaacagttggatataacc
ggtgcccaaccaactccacctcattcgcacacagcctgtctgtggcaggatagcaggatg
gtgattgctggtggactgagtgctgacctttgccctttgaactctgtgtatgtcattgat
gtggagagttgtgtatcacaagaaattgagctgacgccaacactttcaccacgatactcg
catacagcacatgtagttgatgacaagctgtttctgattggtggaatcaacccacatggt
gctcactgctatacaatctccatcgttaatcttactgcggcaacatcctgtgaatattcc
ttgccagtgtttgacattgatcgtccgttgatgtttcatggtcacacaagtgagttacta
tcggcaaccaagatcctgatcattggaggtggaggaaactgcttctcatttggaacacat
cttaatgatacaccaatactgatgggactgccactttaa
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