Luidia clathrata (European starfish): 117300340
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Entry
117300340 CDS
T10152
Name
(RefSeq) integrin alpha-9-like isoform X1
KO
K06585
integrin alpha 9
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04512
ECM-receptor interaction
arun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117300340
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117300340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arun04515
]
117300340
Cell adhesion molecules [BR:
arun04515
]
Integrins
Integrin alpha subunits
117300340
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
117300340
NCBI-ProteinID:
XP_033639990
LinkDB
All DBs
Position
15:2979438..3021017
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AA seq
1121 aa
AA seq
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MVFKLTHGHSERIRQCVASTCPGAEDRLAPRSTRTVHAVSHRWRVALLLGVWWCVLGLTR
AFNLDIDSPVQYQGPPGSYFGYSVVLHENFQGKWVLAGAPTDSSSYQPTLTRPGALYRCG
VFPQPQTCRQIMIDNQGNEKSVTGTRPRFFDAKDNQWLGVSLARQNTGRSGRVVTCAHRW
ANAYFAESHQVIMPNGACFTLANDFEVLNKSIPCIHEVQIKSDANGRGVAWHGWCQAGFS
VDYTEDGQTLLVGAVGSLAWRGSVVSIDSLNTMKMSDVTTWYPTGEEDESYIGYSVSSGH
FISRITTQGVTGAPRAYQRGRVYIYDLTDFTLLTQLNGESMGTYFGAAVKGVDLNHDGLT
DLLVGAPLFSDVEDEGRVYIYINDGNGIMRKLPEMLTGSNTVNARFGSVIVDAGDLNMDR
YNDIAVGAPYEDGLAGAVYIYHGSMTGLKTTPAQRISGKSFSVPLVSFGSSISGGMDMDG
NGYPDLVVGAHQSNKALLFLSKPVIRMLASIVVHSTPIDLNRTECLHQGKLVPCVRVEAC
FIYNGEALPQSIAINYTLEVDYFKAQTGLPGRLTLVENGIRRGGRIERTASLNVGILSCQ
EYEAHIYPNMKDFLSPLPFRMNFDIRTTENSVGPPLTSCTGFCPVLDMYSPNTIVEQVGF
IYNCGEDSICETDLQLKGRIDLARGTPYIAYGNEENLYIHIDLTNHGEEAHLTQVIVTHP
MDITFVRVESDQRSGGVVVCRPEKGLNRTSTVLCDVDNPMKAFRKRSFMVKLFIPSLTLE
IQTVEIEVHAKTSSSEANSTLADNTLVMNLPVKIEGDVTISGVTHPEQVVFGETKSKKKV
DGGSTSYEAGTDGIPLIPVRENLTSEADRQESIGPKFRHVYDARNLGPSTIPFLTTVNIS
LPWKTLDGDWLLYFTHIELQGTGRCEYNHILQHQHKELPEYRANTTSQENSAPAFYTSGE
SATYNCNNALCATIYCIIDNLRMGEGAVVQIQARFFEKTLADLGYSTIRLQGRAMVKVEN
HGNVHVQPRNGRPDSIVVETVAYTESSITSKTVPTWVIAVSTVAGIFFLIVVVLLLWKCG
FFRRPMREEMQKLISDNDETESLNHEVDGGNYKEPFADDED
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttaaattgacacatggacactccgagagaattaggcagtgcgtggcctcgact
tgtcccggggcagaggaccgcttggccccacggagtactcggacagtccacgctgtgtct
caccggtggagggtcgccttgcttcttggagtttggtggtgtgttttgggactgacaaga
gcgtttaacttggacatagatagtcctgttcaatatcagggaccaccggggagctatttt
ggatattcagtagtgctgcacgaaaatttccagggaaaatgggtattggctggtgctcca
acggactcttccagttatcagcccaccttaacgagaccgggggcgttgtacaggtgcggc
gtattcccacagccccagacatgtcgacaaatcatgatagataatcaaggcaatgaaaag
agtgtcacgggtacgaggccacgatttttcgacgccaaagacaaccagtggctcggcgta
tctcttgcgagacaaaacacaggacggtccggtcgagttgtcacatgcgctcatcgctgg
gccaatgcgtactttgcggaaagtcaccaagtcattatgcccaacggtgcgtgctttacc
ctggcaaacgactttgaggtgttaaacaagagcattccgtgcatccacgaggttcaaatt
aagtctgacgccaacgggaggggagtggcctggcatgggtggtgccaggcgggcttcagt
gtggactacactgaagatggccagacgttgctcgttggtgcagttggttccctcgcttgg
agagggagtgttgtgtcaatagacagccttaacacaatgaaaatgtctgacgttactaca
tggtatcctactggtgaagaggatgagagctatataggttattcagtctcctcgggtcat
ttcatctcaaggatcacgacgcagggcgtgacgggggcaccccgggcataccagcgggga
agagtctatatttacgacctgacagacttcaccctgctcacccaactcaatggagaatcg
atgggaacttactttggtgcagcagtcaaaggtgttgatctcaatcacgatggactcaca
gatttactagtaggagcacccctcttctctgatgtggaagacgaaggaagagtgtacatt
tatataaatgatggcaatggcataatgcggaagttgccagaaatgctgacggggtcgaac
actgtgaatgcaagattcggatcggtcatcgtagacgctggcgatctcaacatggaccga
tacaatgatattgctgtcggtgcaccttatgaagatggactggctggtgctgtgtacatc
taccatggatcaatgacaggacttaagacaacacctgctcagaggatctccgggaagtcc
ttcagcgttcctctagtttccttcggcagttccatatcagggggaatggacatggacggt
aacggctacccggatttggtagtaggagctcatcagagcaacaaggcattactgtttctg
agtaagcctgtaatccgtatgctggcatcgatcgtggtgcacagcacaccgattgacctg
aaccgcacggagtgcctgcaccaaggtaaactggtaccctgcgtcagagtggaagcctgc
ttcatatacaatggcgaggcgctcccacagagtatagccatcaactacacacttgaggtt
gattacttcaaggcgcagactggactacctggacgtctcacgttggtcgaaaatggaatc
cgtagaggtggaagaattgaaagaacggcttctctgaacgttggaatactttcctgccag
gagtacgaggcacacatctatcccaacatgaaagacttcctaagccctctcccgttcaga
atgaactttgacatcagaacgacggagaactccgtcggtcctccgctcacgtcgtgcacc
gggttctgtcccgtactggacatgtattcacccaatactattgtagaacaggttggattt
atttacaactgtggtgaggactcgatctgtgagacggacctgcagttaaaaggaaggata
gatctggcaagagggactccgtacattgcctacggtaatgaagagaacttatacattcac
atcgatctgactaatcacggagaggaagcccatttgacccaggtcatcgttacgcatccc
atggacatcacattcgtcagagttgaaagtgaccagaggagcggtggtgtggtagtgtgt
cgaccagaaaagggtctaaacagaacctcgacagtgctttgcgacgtcgacaaccccatg
aaggcattcagaaagagatcttttatggtcaagctcttcattccctccttgaccctcgag
atccagacggtggagatcgaggtccatgccaagacgtctagtagtgaggctaacagtacg
ttagcggataacactcttgtgatgaacctaccggtgaagatcgagggtgacgttacgata
tcaggggttactcatccagagcaagtggtcttcggtgagaccaaaagcaaaaaaaaggtt
gacggggggagtacgtcgtatgaagccgggacagatggtatccctttaatacctgttaga
gagaatctcacatcggaggcagacagacaagaatccatcggccccaagttcaggcatgtt
tatgatgcacgtaatttaggacctagcacaatccccttcctgacaacggtgaacatcagt
cttccttggaagacgcttgatggtgattggttgctttactttacgcatatagagttacaa
ggcacagggagatgcgagtacaatcacatcctacagcaccaacacaaggagctgcctgag
tacagagccaataccaccagccaggaaaacagtgcccctgctttctacacatctggagag
tcagccacgtacaactgcaacaatgccctgtgtgcgaccatctactgcatcattgacaat
ctacggatgggcgaaggcgctgtggtgcagatccaggcacgcttttttgaaaagacactg
gctgatttaggatacagcactataagacttcaaggtcgcgcgatggtgaaagtggagaac
cacggtaatgttcatgttcaacccagaaatggtcgcccggactccattgtggtggaaacc
gtggcgtacacggagtcctcaatcacttcaaagacagttccaacgtgggtgattgcagtc
agcacggttgcgggaatcttctttttaatagtggtggtcctattattgtggaagtgcggt
ttcttcaggaggccgatgcgagaagaaatgcagaaactgatcagcgataacgacgagacg
gaatcgttgaaccacgaggtagacggaggaaactacaaagagccattcgcagacgatgag
gactga
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