Luidia clathrata (European starfish): 117300668
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Entry
117300668 CDS
T10152
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117300668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arun03041
]
117300668
Spliceosome [BR:
arun03041
]
Complex A
Other components
Complex A specific factors
117300668
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
KH_12
zf-CCHC
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
117300668
NCBI-ProteinID:
XP_033640270
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All DBs
Position
16:7880621..7907129
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AA seq
824 aa
AA seq
DB search
MAGTGANSIPLGALHPILRGQKVPGGGITGPIGMQMSMPMPMPMQQQMPMGPMGGGGGGE
SAMLNAAREAAARVTANIMGKRPAPPNAGNAAKSMDSSNWPPDKKRKRSRWGGEETKTVG
VASVIPSGLNKDQEKQVLMHLQIEEIGRQLRSGDLGIPTQEDRSPSPEPVYNHEGKRLNT
REYRTRKKLEEQRHILIQDAMLVNPEYKPPADYKPPIQRVSDRVMIPQDDHPDINFVGLL
IGPRGNTLKKLEKDTGTKVMIRGKGSVKEGKVGRKDGQPLPGEDEPLHALVTANTSEAVK
KAVDQIREIIKQGIETPEGQNDLRRMQLRELARLNGTLRDEDTTRCSNCGALTHRTWQCP
EKQNITGTIQCSICGGTGHIAQDCRQNPMGGGGPGGPMGGGPMGGPNGPPPRMQGPSAAE
KAKMDSEYMSLMAELGEGPPMSDPKVAGMPPSSHGHAVMHHMGPRPLLSTPPGGQGNQNH
PHHPPPLMGPNFQPPWMNKDHHGPPMQNKPPSLLGMPPPPHHRGPPGGGGGSGPPGPGHP
QNNFPGPPPPGPPGQFNMNQPPPGLLPPPMMQPPPNMMNVPMPPPGMGGMGGGNPPWAMP
PPPPASQHSAAETPVTITPSLQSLANMQALAMPVPPPPTSLLAAPPPPPPSSDPPPPPLP
STAPWQIQTSAGGRPVATSTGSVTTPPWQRFTQEGGVNVSAASLPWQQAAVALTTANIGS
SMLPWQQLLQQQQVSTVTTPVTGTQASLSVPPPPLQWAPPPPPMQSPPPMAMPPQGAPLP
QFQPPIPQGPPPPMPGIMPYGQPPPPLSQIPGLGQPPPPPPPSS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtacaggagcaaacagtataccccttggagcccttcatcctattttgcgaggg
cagaaggtgccaggagggggtataactggaccgattggtatgcaaatgtcgatgccaatg
ccgatgccgatgcagcagcagatgccaatgggtccaatgggtggcggtggtggcggtgaa
agcgccatgctgaatgctgcgagggaggcagcggcacgagtgacggcaaacatcatgggg
aagagacccgcaccaccaaatgcaggaaatgcagccaagtccatggattcatccaattgg
cctccagacaagaagcgaaagagaagtcgttggggtggagaggaaaccaagacggttgga
gtggcatctgttattccatcaggactcaataaagaccaagagaaacaagtcttaatgcac
ttgcagatcgaagagataggcagacagctgcgatcaggtgaccttgggattccaacgcaa
gaggataggtctccgtctcctgagccagtgtataaccatgaaggaaagaggctcaatact
cgtgagtatcgtactcgcaagaagctagaagagcaacgtcatatactcattcaagacgct
atgttggtcaacccagagtataagcctcctgctgactacaagccacctattcagcgagtg
agtgaccgagtcatgataccacaagatgatcacccagatatcaactttgttggactcctc
atcggacctcgtggaaacaccttgaagaagctagagaaagatacaggcactaaggtgatg
attagaggcaagggttctgtcaaggaagggaaagttggacgtaaagatggtcagccatta
cctggtgaagatgaacctcttcatgcattggtgactgctaatacatcagaagctgttaag
aaagctgttgatcagatccgtgaaataatcaaacaggggattgagacaccagaaggtcag
aacgatctgagacggatgcagctgcgagaattggctcgtcttaatggtacactaagagat
gaagataccacaagatgttctaactgtggtgccctgactcatcgtacatggcaatgccca
gagaagcaaaacatcacaggcaccatacagtgttcaatatgtggaggcactggccatatt
gcccaggactgtcgtcagaatccaatgggtggtggaggacccggtggccccatgggtgga
ggaccgatgggtggacctaatggacctcctcctaggatgcaaggtcctagtgcagcagag
aaagccaagatggactctgagtacatgtccctaatggcagagttgggagaaggaccacca
atgtctgatcctaaagttgctggaatgccaccatctagtcatggtcatgctgtaatgcat
catatgggacctagacctctactatcgacacctcctggtggtcaaggcaatcagaaccat
ccgcatcatccaccacctctgatgggtcccaatttccagcctccatggatgaacaaagat
caccatggacccccaatgcagaacaagccccctagtctcctcggtatgccccctcctcca
caccatcgcggcccccctgggggtggtggtggtagcggaccaccaggtccaggccatcca
caaaacaacttccctggccccccaccccctggcccaccaggtcagttcaatatgaaccaa
cctcctcctgggttgttaccgccccctatgatgcaacctcctcctaatatgatgaacgtc
ccaatgccccctcctggtatgggtggtatgggtggagggaacccaccatgggcgatgcca
ccccctccaccagcatcacaacattctgcagctgaaacaccggttaccattacaccatct
ctccaatcattggccaacatgcaggccttggctatgccggtacctccaccccctacctct
ctcctggctgccccccctccaccaccccctagtagtgacccaccaccacccccattacca
tcgactgcaccctggcagatacagacaagtgcaggtgggagaccggtggccacgagtacc
ggctctgtcaccacgccaccatggcaacgcttcacacaagagggtggtgtcaatgtttcg
gctgcaagtctcccatggcaacaagctgcagtggcattaacaacagccaatattggatca
tcaatgttaccatggcaacaacttctacagcagcagcaagtttccacggttaccactcca
gtaactggtacccaggcatctctgagtgtgccaccccctccgcttcaatgggcacctccc
cctcctccaatgcagtctccgcccccaatggctatgcctccccaaggagcccctctcccc
cagtttcagcctccaatcccacagggtccgccaccccctatgcctgggataatgccttac
ggtcagcccccaccccctctgtctcaaatccctggtcttggacaacctcctccacctcct
cccccatctagttaa
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