Luidia clathrata (European starfish): 117300852
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Entry
117300852 CDS
T10152
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04140
Autophagy - animal
arun04142
Lysosome biogenesis
arun04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
117300852
04140 Autophagy - animal
117300852
04148 Efferocytosis
117300852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arun04131
]
117300852
Membrane trafficking [BR:
arun04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117300852
Hops complex
117300852
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
Clathrin
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
zf-C3HC4_2
Beta-prop_IFT122_1st
zf-RING_2
zf-C3HC4
Beta-prop_WDR3_1st
zf-rbx1
zf-C3H2C3
Beta-prop_VPS8
Beta-prop_EML_2
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117300852
NCBI-ProteinID:
XP_033640592
LinkDB
All DBs
Position
16:complement(10674139..10705334)
Genome browser
AA seq
1171 aa
AA seq
DB search
MAFLQQWKRLNFFDKEVVKLPGSAETFTSLKDIDITACASGRGQVTLGDSEGNLFFLDRN
LEISGFRAYELRVTHLYQLKQHNILVSIGQDEPGINPIIKVWNLDKQDKMRNPTCSRITR
ALPGSNQPSNVSVLAVSETLTMMAIGFQDGSVTLVRGDVTRDRHNKFKTIFQDKTPITGL
AFRHSQRSNVLFVATETSVSSFSLSGKDSHREVLDLHGCPIHCAVMSDTTQFNQFVIGRE
DAVYFYQPDGRGPCLAFEGKKTLLHWYRGYLVVVTKDSKMLSRNLGSGGQQLVMDTVTVY
DIQNKFIAYLAPVPEVLDVVQEWGSIYVLGGDRKLYHLLEKDTQTKLEILFKKNLYSLAI
NLAKSQHYDYDGLIDIFTQYGDHLYSKGDHDGAISQYIRTIGHLEPSYVIRKFLDAQRIH
NLTAYLQALHKQSLANEDHTTLLLNCYTKLKDNSKLDEFIMTKDKEVDFDVETAIKVCRQ
AGYYKHALFLAEKHGQHDWYLKIQLEDIKNYQKSLTYIAKLEFFEAMDNMKKYGKTLMNE
VPKDTTDLLKILCTDYKPSDIANFLQVGVDGEPLIDSSMLSGDVIPTVRKANAEEFIHIF
VNNSRQLMEFLEHMIKVQPESSNLIYNTLLELYLHDMAHEDERRNRLELNRRAMDLLQTS
DDHCDIDQALVLCQMHNFKKGILFLYEKSKLYQQILHYHMENNEYDQVIDCCKRYGTQDP
NLWVQTLSYFARKEENCKQYIIEALCQIDRHNLLPPLMVVQTLAHNSTATLSVVKDYIIR
RLQQENDQISEDERLVKQYREETEKMRVQIEEMKTSAKIFQVSKCSICNHNLELPSVHFL
CQHSYHQHCFESYAENDAECPACAPENHKVMDIIRAQEQSKDLHEQFHRQLEKSQDGFSV
VADYFGRGVFNKVTLLTDSFPNASRKQTPTHTSSNLPAPMQPTTASYMIPSQTQSIPRSS
QPASRATQPSQGYTSIPSQVPQPMRTQVPQPTRTQVPQPSRTQVPQPSKTYVPQQLPRSS
QAPVQVPRGGGTQSNKQSTQQPQAATPDIYHSSPSRLTPSSNPSTPQSSNPSTPQRVPTP
TQEYNPFHTGPSAGTAKGPTPASSGTSQKAAKPSGAQSYNPFESGGDASKGSESKVNPFT
GRPDTPPNPFGNDAPSTNPFDEDEDANNPFL
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttctacagcagtggaagagattgaatttctttgacaaggaagtggtgaagtta
ccaggttctgcggaaaccttcactagcctcaaggacattgacatcacagcatgtgccagc
gggcgtggtcaagtcaccctgggagactccgaaggaaatcttttctttctggatcgtaac
ttggagatttctggattcagagcttacgagcttcgtgtgactcatttatatcaactcaaa
cagcacaacatcttggtgtcaattggacaagatgagccaggcatcaatcccatcatcaag
gtatggaatctggacaaacaagacaagatgcgcaatccaacgtgttcgcgcatcacgagg
gcgctaccagggagtaatcaaccatctaatgtgtcggtgctagccgtcagcgagacattg
actatgatggccatcggattccaggacggtagtgtcacgctggtcaggggagatgtgaca
agagacagacacaacaaatttaaaaccattttccaagacaagactcccatcacaggtcta
gcattccgacactcacagcggagcaatgtgttgtttgttgccacggagaccagtgtcagc
tcctttagtctgagtggaaaagattctcatcgggaagtacttgacctacatggatgcccc
attcactgtgcagtcatgagtgatacgacacagtttaatcagtttgtcattggtcgagaa
gacgcggtgtatttctaccagccagatggaagaggtccatgcttagcatttgaagggaag
aagactctcttacattggtatcgaggctatctcgtcgtcgttaccaaagacagcaaaatg
ctctccagaaatctaggctcaggcgggcagcagcttgtgatggatacagtcacagtctac
gatattcagaataaattcattgcttatcttgccccagtaccggaagtcttggatgtggtc
caggaatggggatcgatctatgtacttggaggagacagaaagctctatcatcttctagag
aaggacacgcaaaccaaactggagattctctttaaaaagaacctatacagtctggcgatc
aatcttgccaagagccagcattacgattacgatggactcatcgacatcttcactcaatat
ggagatcatctgtacagcaagggagatcatgatggcgctatatcacaatacatacgcacc
attggacatctggaaccatcctatgtcattaggaagttcttggacgctcagagaattcat
aacttgacagcttacttacaagctctgcataagcagtcactggccaatgaggatcacact
acgctactactaaattgttataccaagctcaaagataatagtaaactagatgagtttatc
atgaccaaagacaaggaggttgattttgacgtagagacagccatcaaggtctgccgtcag
gccggttactacaaacatgccttattcctagccgagaaacacggccaacatgactggtac
ctcaagatacagcttgaagacatcaagaactaccagaagtctctcacatacatcgctaag
ctggaattttttgaggcgatggacaatatgaagaaatatgggaagacattgatgaacgaa
gtccctaaagatacaacagacctccttaagatcctgtgtacagactacaaacctagtgac
attgcaaatttcctgcaagttggagttgatggcgagccattgattgattccagcatgctg
agtggagacgtcataccaaccgtacgcaaagccaacgcagaagaattcatccatatcttt
gtcaacaactcacgccaattaatggagttcttagagcacatgattaaggttcaaccagaa
tcctccaatctgatatacaacaccttacttgagttatatcttcatgatatggcccatgaa
gatgagagacggaatcgtcttgagctgaatcgaagagctatggacctcctacaaacatca
gatgatcattgtgacatcgaccaagccctggttttatgccagatgcacaatttcaagaaa
ggaattctattcctctatgagaagtcaaaactttaccagcaaattctgcattatcatatg
gagaacaatgagtacgatcaagtcatagattgctgcaagagatatgggactcaggatcca
aatctgtgggtgcagactctctcctactttgcccgtaaagaagagaactgtaaacagtat
atcatcgaggctctatgccagattgatcgtcataatctactgccaccgctcatggtcgtc
cagactcttgctcataactcaactgctacactctctgttgtgaaggattacatcatccga
agacttcagcaagaaaatgatcagatctcagaagatgaacggctcgtcaaacaataccga
gaagaaacagagaaaatgagggttcagatagaggagatgaagacaagtgccaagatcttt
caagtctctaagtgcagtatttgtaaccacaacttggagctaccatcagttcattttctc
tgtcagcattcctaccaccaacattgttttgagagctatgcagagaacgatgcagagtgt
cctgcatgtgcaccagagaaccacaaagtcatggatatcattagagctcaggaacagagc
aaggatttacatgagcaattccatagacagttggagaaatctcaagatggtttctcagtc
gtggctgattattttggaagaggagttttcaataaggtcacgctgttgactgattctttc
ccaaatgcctcaaggaaacaaacacccactcacacatcgagtaaccttcctgcacccatg
caacctacaacagcatcatatatgataccttcacaaacccagtccatacccagatcaagt
cagccagcttctagagccacccaaccatctcaagggtatacatctataccctctcaagta
ccacaacctatgaggacccaggtcccccaacctactagaacccaagtaccccagccgagc
agaacccaagtaccccagcccagcaagacctatgtaccccaacagctacccagatcctct
caagcgcccgtgcaagtacccagaggtggtggtacccagtcaaacaagcagagcacccag
caaccccaggcagcaacccccgatatataccactcgagtccaagcaggctcaccccttct
tcaaacccatccaccccgcaatcatcaaatccgagcacccctcagcgggtgccaacacca
acccaagagtacaatccctttcacactgggccatcagcaggtacagcaaaaggacctacc
cctgcatcaagtggtacgtcccagaaagctgccaagccaagcggtgcacagtcgtacaat
ccatttgaatctgggggtgatgccagcaagggaagtgagagtaaggtgaatccctttacc
ggacgcccagatacacctcctaacccgtttggaaatgatgcacctagtaccaatccattt
gatgaagatgaagatgctaataaccctttcctttga
DBGET
integrated database retrieval system
