Luidia clathrata (European starfish): 117301003
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Entry
117301003 CDS
T10152
Name
(RefSeq) ATP-dependent RNA helicase DDX54-like
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arun03009
]
117301003
Enzymes [BR:
arun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117301003
Ribosome biogenesis [BR:
arun03009
]
Eukaryotic type
Pre-60S particles
Helicases
117301003
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
117301003
NCBI-ProteinID:
XP_033640771
LinkDB
All DBs
Position
16
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AA seq
884 aa
AA seq
DB search
MGKNKNKGRAARRYTGSAKKDSKSKQIDDSGMESGMESDMETDTVAPTERQPGRVSVGFP
KLDGYTSDAEPDTRELVKQMNRKKKKSGGFQSMGLCHPVFNGIMKKGYKIPTPIQRKCIP
IIMEGKDVVAMARTGSGKTAAFLLPMFERLQQRSAKSGARALILSPTRELALQTLKFSKE
LGRFTSLKAEVILGGDKLDDQFAALHENPDIIIATPGRLLHVLVEMEMRLKYIEYVVFDE
ADRLFEMGFAEQLREILHSLPQHRQTLLFSATLPKSLVEFAKAGLNDPTLIRLDVETKIS
DQLKSSFFFLRQSDKIAVLLHLLREVVKPDDLTVVFMATKHHVEYVKEILTMAGINCTYT
YSDLDHTARKINVAKFTHKKTKVMLVTDVAARGIDIPMLDNVINYNFPGKPKLYVHRVGR
VARAGRSGKSYSLIGPDELPYLLDLHLFLGRSLKLGSPHETEDEDGLIGRVPQSIIDEEG
ELVGNYHNQSVELESLQKACNNAAKHYLKTRPNPSTASLKRVREMGIMGIGYHPILEIKD
NKQENKRVQLVDNIKNYKPKTTIFEIATSTKSLAHQIMKSKRRYHGDIVKKNRVVSVPKA
DGGAAGESRLPEVQSTDKDIEDAFSAIIAPGCKRKSEKYVSSIAKPKKPKLEVKTDHRDK
EYYISHFAPDSQTEQGLSVGTFDQQAESAVLDMTQDDNNTMLKQRGKIKWERKKMRFVNE
VGREGPKKIRTESGALIPASYKKNIYKDWLERSKADARAEAEESDKEDEDDKKKNNKGAK
FSTLGMSRYKKNQMKIVNKSSGSKYDQPLPRKRKGGAQGGGGKKGKKPMRGEVKSHEQVL
KSRRTKEKNKARNIPKKQRQQEVKKKMDNRQLMLMKKSKFNKRK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaataagaataaaggaagggctgccaggcggtatacagggagtgcaaagaaa
gactcaaaatccaaacaaattgacgacagtggaatggaatccggaatggagtctgatatg
gaaacagatacagtggctcccacagagagacagcctggaagagtgtccgttggttttccc
aagttagacggctacacttcagatgcagagcccgatacaagagaactcgtcaaacagatg
aacaggaagaagaagaaatctggaggtttccagtcgatgggtttatgtcatccagttttt
aacggaataatgaagaaaggttacaagattccaacaccgatccagagaaagtgtatcccc
ataataatggagggtaaagatgtcgttgccatggcaaggacaggcagtggtaaaacggcg
gctttcctcctccccatgtttgagagactccaacagagatcagccaagtctggagcgaga
gccctcatcctctctccaacgagagagctggcgcttcagacattgaagttctcaaaagag
ctcggtcgtttcacatccctaaaggcggaagtaatcctgggtggggacaaacttgacgat
cagtttgcagcattacacgagaaccctgacataatcatcgcgacgccgggacgtctgctc
cacgtcttggttgagatggagatgaggttgaagtacattgagtatgtggtgtttgacgaa
gcagacagactttttgagatgggtttcgccgagcagctccgtgagattcttcactctctg
ccccagcatcgtcagacgctactcttctcggcaacgctgcccaaatctctcgttgagttt
gccaaggctggactgaacgacccgaccctcatacggcttgacgtcgagaccaagatatca
gatcaactcaagagttccttcttcttcctgagacagtctgataagattgccgtcctgctg
catcttctacgggaggtggtcaagccggacgatctgaccgtcgtcttcatggcaaccaaa
caccacgtggaatatgtaaaagagatccttacaatggccggtattaactgcacgtacacc
tacagtgacttggatcacacggcaagaaagatcaacgtggccaagtttacccacaagaag
accaaagtcatgctggtgacagacgtggctgcccgtggtattgacattccaatgctagac
aatgtcatcaactacaacttccctggcaaaccaaagctgtacgttcatcgagttggtcgt
gtggctagagcaggaaggagcggtaaatcctactcactgattggtccagatgagctgcct
tacttactagatcttcatctctttcttggtagaagtctcaagttgggttcgccccacgaa
acagaggatgaggatggattgatcgggcgtgtccctcagagcatcatcgatgaggaaggg
gagctcgttggtaattatcacaaccagtcagtggaactggagtcgctccagaaggcctgt
aacaacgctgctaagcactacctcaagaccagacccaacccatccacagccagcctgaaa
cgagtcagggagatgggcatcatggggattgggtaccatcctattcttgaaattaaggac
aacaagcaggaaaataaaagggtgcaacttgtagataatatcaagaactacaaacccaaa
acgacaatctttgaaatcgctacatccacaaaaagcctcgcccaccagatcatgaaatca
aagcggcgttaccatggagatatcgttaagaagaaccgggttgtgtcggttccaaaggct
gatggaggggctgcaggagaatcaagattaccggaggttcagagtacagataaagacatt
gaggatgcattcagtgcgattattgcgcctggttgcaagaggaaatctgagaagtacgta
agcagcatcgccaaacccaagaagcccaagttggaagtcaagacagaccatagagataag
gagtactacatctcgcactttgctcctgatagccagacggaacaaggtctgagtgttgga
acatttgatcagcaagcagagagtgccgtgttggacatgacacaagatgacaacaacacc
atgttgaaacaacgcgggaagattaagtgggagaggaagaagatgcgctttgtaaacgaa
gttggccgagagggacccaagaaaatccgcaccgagagtggagcactcatcccagcatcc
tacaagaaaaatatatacaaagactggctggagagaagtaaagctgacgctcgggcagag
gccgaagagagcgacaaagaggatgaagatgacaagaagaagaataacaaaggagcgaaa
ttctcaacgctcggtatgagtcgctacaagaagaaccaaatgaagattgtcaataaatcc
tcaggctccaagtacgaccagcccctgcccaggaagaggaagggcggagctcaaggcgga
ggaggcaagaagggcaagaagcctatgagaggagaggttaagagtcatgagcaggtgttg
aagtccagacggaccaaggagaagaacaaggctcgcaacatccccaagaagcagagacag
caagaggtcaagaagaagatggacaatcgtcagttgatgctgatgaagaagtccaagttt
aacaagagaaaataa
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