Luidia clathrata (European starfish): 117301017
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Entry
117301017 CDS
T10152
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arun04131
]
117301017
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arun04812
]
117301017
Enzymes [BR:
arun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
117301017
Membrane trafficking [BR:
arun04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117301017
Cytoskeleton proteins [BR:
arun04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
117301017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_22
MIT
AAA_14
TIP49
AAA_16
Mg_chelatase
Vps4_C
IstB_IS21
DUF815
AAA_2
NPHP3_N
AAA_24
nSTAND3
AAA_7
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
117301017
NCBI-ProteinID:
XP_033640792
LinkDB
All DBs
Position
1:complement(6903534..6958043)
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AA seq
662 aa
AA seq
DB search
MPRNKPGERARSPSGLKRKLKPEQQESPHRRNLRFASYPLLFVFGLLRFIVFQVWILLSH
AFWRATDIKQKYSVERSAYATVETTVNGTHLTGVTITSRTDSKSGQAGSSAGMTDNNRTE
DASLLFKQKQHHKKAFEYVSKALKIDEDDGGNKKLALDYYRRGINELENGIAVDCQKPGV
EWERAKRLQEKMRTNLEMAKERIDLLNSMAQSAVLEYTYSEGETVMARPNRATGSQTKRK
AAAMTKQVGNRPRNARIGPQGTHDKTDKLFGSTCRGSERTSLPKMTHKTTVVPRSTPREG
FRSRSPATPERRPLTYGHRHSHGTEPSNTTSSRGRGLTRKDAASALASDKAPPSVRQKIS
KLKNVDSKLAHRILDEIMESGAPVKFMDIAGQDLAKQALEEIVILPALRPELFTGLRAPA
RGLLLFGPPGNGKTMLAKAVANESNATFFNISAATLTSKYVGEGEKMVKALFAVARELQP
SVIFIDEIDSLLTERKEGEHEASRRLKTEFLLEFDGVTADSSDRVLVMGATNRPQELDDA
VLRRFVKRIYVTMPDLETRKVLLTRLLSKHHTPLKDEELAQLSQITEGYSGSDLTALAKD
AALGPIRELGPLLVKSAAAAEVRDIKLADFQESIKRIRCSVQPHLLDTYIRWNAMYGDVG
SV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtaataagcccggcgagcgcgcccgtagtcccagcggtctaaagcgcaaatta
aagccggaacaacaagaatctccccaccgtcggaacctacgtttcgccagctaccctctg
ctcttcgtgtttggtctcctacggttcattgtcttccaagtttggatacttttatcgcat
gcgttttggagagcgaccgacattaagcagaagtactccgtggagcgctcagcgtacgcc
actgttgagactaccgtaaatggaacacatttgacgggggtgaccatcacctctagaacg
gacagcaaatcgggacaagctggctcgtctgcaggaatgacggataataacaggacagaa
gatgcaagtttattattcaaacagaagcaacaccacaagaaggcctttgaatacgtgtcc
aaagcgttgaagatagatgaagatgacggaggaaataaaaagttagctcttgactactac
agaagaggtatcaatgaattagagaatggcattgctgtggattgccagaaaccaggtgtg
gaatgggagagagcaaaaaggttacaggaaaagatgagaaccaatctggaaatggccaaa
gagagaatagatcttcttaattcaatggcacaaagcgctgtacttgagtacacatatagc
gaaggggaaaccgtgatggcaagaccaaacagagcaacgggttcccagaccaaacgaaaa
gcagcagcaatgaccaaacaagtcggaaatagaccacgaaatgctcgtattggaccacaa
ggaacacatgacaaaacagacaaactatttgggtctacttgtagaggaagtgaacgaaca
tccttgcctaagatgacccataagactactgttgtacctcgatccacccctagagaaggc
ttcagaagtagaagcccagccacaccagagagacgaccactcacctacggtcatagacac
agtcatggcacagagccatcaaacactacaagttcaaggggaagaggtcttaccagaaag
gatgcagcaagtgcactggcctcagacaaagcaccgccctcagtccggcaaaagatcagt
aagctcaagaatgtggactctaaactcgctcaccgtatactggacgaaatcatggaaagc
ggggcaccggttaaatttatggatattgctggccaagatctcgccaagcaagcccttgag
gagatagtgattctacccgcgctgcgtcctgagctgtttacagggctaagggcaccggca
aggggcctcttgttatttggcccccctggaaatggaaaaactatgctggctaaagcagtg
gccaatgaatccaatgcaacgttcttcaacatcagtgcagcaacgctaacctctaagtac
gtcggtgaaggagagaaaatggtcaaggcactctttgcagtggctagagagttacaacct
tctgttatttttattgatgagatcgattccctcttgacggagagaaaagaaggagaacac
gaggccagccgccgactcaagacggagttcctcctggaatttgacggggtaacggctgac
tcgagtgacagagtcctggttatgggtgcaacaaacaggccgcaagagctggatgacgcc
gtgctacgtcgatttgtaaaaagaatatatgtgactatgccagacttggagacgaggaag
gttctgttgacccgtcttctttccaaacaccacactccactgaaagatgaagaactggcc
cagctttcccagatcaccgagggctactcagggagtgatctgacagccttagctaaggat
gctgcacttggaccaatcagggagcttggccctcttctggtgaaatctgctgcggctgct
gaggtacgggatatcaaattagccgacttccaggaatcgattaagcggattcgctgcagc
gttcaacctcacttactcgacacctacatccgttggaatgccatgtacggagacgttggc
tccgtttga
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