Luidia clathrata (European starfish): 117301070
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Entry
117301070 CDS
T10152
Name
(RefSeq) nucleoporin NUP42-like
KO
K14321
nucleoporin-like protein 2
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117301070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117301070
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117301070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
Nucleoporin_FG
zf-CCCH_2
zf-CCCH_PARP12
zf-CCCH_12
Torus
zf-CCCH_RBM22
Motif
Other DBs
NCBI-GeneID:
117301070
NCBI-ProteinID:
XP_033640841
LinkDB
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Position
16:complement(7268327..7274986)
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AA seq
464 aa
AA seq
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MVVCKFFLRGECRFGDRCRFEHTKGGQGGGGGGYQGYGDGGGGRDGGGYGRGGGGYDQRG
GGGGGYDQRGGGGGGYNQQNNPFVYINKNSSSYDNRQGRLDDDGRGGGGGGKKRVQFKDS
FGTSQNQNQNRFNALGAASGLAESHSDVLDTIKHDVEEWEGSKMWPFSSYKPKTSQGCVP
GFEDISPEEIRFIAYTAVKESKFDQHKASFAAMADIYKRQRDQLMSPSQEITSQLTAIFN
GGGQMPQSIFGITESPVMAMYNHSTSLGSTSQGFGASGFGTQPSSFGSMSTSTASGTGFG
GNAFASATPGSFGSGFGNQQTQNATSTGTGLFGKPAAPSEPTGTGLFGKPATGQTAAAAP
FSGSSGIFGSNSATVTDSTGNVGLFGKPAPAGNTASSTNAQPGLFGKNTQGASGGASGGA
SSGNKVGVYTPLEELTAEEKEQFQANSFTLGKIPTRPPPLELCR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggttgtttgtaaatttttccttcgaggtgaatgtagatttggtgatcggtgtcgtttt
gaacacacaaaaggcggtcaaggaggaggaggaggtggttaccagggttacggagacggt
ggaggaggtagagatggtggaggctacggaagagggggcgggggctatgatcaaagagga
ggagggggcgggggctatgatcaaagagggggaggtggaggtggttacaaccaacaaaat
aacccttttgtttacatcaacaaaaacagcagttcctatgacaataggcaaggaagattg
gacgatgatgggcgtggtgggggaggcggagggaagaaacgcgtccagtttaaagactca
tttggaacgagccagaaccagaaccagaaccgctttaacgctctgggtgccgcctcggga
ttggctgagagtcacagcgatgttctagatacaatcaagcatgacgttgaagagtgggag
ggcagtaagatgtggccattttccagctacaaacccaaaacatctcaaggctgcgtacca
gggtttgaggacatctcgcctgaagagatccggttcattgcgtacactgcagtgaaggag
agtaaatttgaccaacataaagcatcatttgctgctatggctgatatttacaagaggcag
agagaccagctaatgagcccttcgcaagaaatcacatcccaactgacggctatcttcaac
gggggtggtcaaatgccacaatcgatctttgggatcaccgagtcgccagtcatggctatg
tacaatcatagcacttcactcgggtcaacaagtcaaggttttggagccagtggatttgga
acccaaccttccagctttgggtccatgtctacatcaaccgcctctggaacaggttttggt
ggcaatgcctttgcaagtgctacacctgggtccttcggtagcggcttcggaaaccagcag
acacaaaatgcaaccagcacaggtacaggactgtttggtaagccagcagcaccgagtgaa
ccaacaggaacaggactctttggtaaacctgctactggacagacagctgctgcagcgcca
ttcagtggcagcagtgggatattcggtagcaacagtgcgacggttactgacagcacaggc
aatgtaggtctctttggaaagcctgctccagctgggaacactgcgtcttctacgaacgcc
caaccaggtttatttgggaagaacacgcagggtgcatcgggcggtgcatcgggaggagca
tcgtcaggcaacaaagtgggtgtgtacacacctcttgaggaactcaccgcagaggagaag
gaacagttccaggcaaactcttttacactgggaaagatcccaacaaggccaccacccctg
gaattgtgtagatga
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