Luidia clathrata (European starfish): 117301149
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Entry
117301149 CDS
T10152
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117301149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arun03400
]
117301149
DNA repair and recombination proteins [BR:
arun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
117301149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
117301149
NCBI-ProteinID:
XP_033640935
LinkDB
All DBs
Position
16:complement(3544614..3574064)
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AA seq
1385 aa
AA seq
DB search
MPKNTLFSYFSKSPAVARKSTSPLTADDVGNEKSKSPKEAAKGPDQSVKGNGADDCAFKV
GDVVWAKLEGYPWWPSLVCNHPTLNTHIKQGKKRQVHVQFFDESHSRSWIFEKYVETLKL
KDSERGGKFHTQKLDVCQAVKEAKGALDLSVEDRLQLIMCTQSDEEQEEQEMKVNGSSAD
KSSSSDEDDMEEEEEEIREKSKKMLRASTRQTPLSTASRKRRRIIESSDDDESSGDEYKP
HVGDSGSSDSDSSGVDENETSEASLMSESGTPQKSRKRKRGSSSRTSVTSGNKVTRPVFS
VMTPDPPKPKMVAHDPKMVASEPKMVAPVTPQPKKTFLTPTMSAKTKSRLTSFQTPESSP
SPSTPLDSDETRYPHQRYEWLKDGHRRDLKGNPQSHPDYDPRTLFVPKSFQEKTTPAMRQ
WWAMKSRFFDTVLFFKMGKFYEFYHMDAEVGVKELGLIYMKGENAHSGFPEIAYGRYSDT
LIQKGYRVARVEQTETPDMVQERCKKMSKMATKYDKVVKREICRISTKGTRTYSFIDGDT
CEAQHSYLLAVKEKVSDDTTEGERLYGVCFVDTSIGKFHLGQFTDDRHCSRFRTLIAHYN
PAQVLFERSKLSPKTQQILSNNLLSVIKEPLVPGTEFWDSSKTLKILSENRYFEDDDGKK
SKEDENKGGMPSVLQNMISDADTLGHSAKDSSELAVSALGACTWYLKKSCLEHELLSLCN
FELYVPLDVESVVKADVVNFAAGRQHMVLDGVTLYNLDILENGTSGTLEGTLLERLDQCC
TPFGKRLFKQWLCAPLCNPKSINDRLDAVEDLINIPDKMAEVNDLLRQLPDLERLLSKIH
TLGLARSNLDHPDSRAIFFEDTLYSKRKIQDFLTALDGFKTSIKIIHIFKNSTSNFKSKL
LKKTLTIVDGDVGSVQGRFPDLTKHLSFFDNAFDHRKAKEAGAIVPNKGVDPEYDGAIAA
MKSANQRLDDYLDKQRKRLGCKTITYWGTGKNRFQLEVPESALSRHTPEDYELQSSKKGF
KRYWTIEIQEMFADLVSEEERRSVALRDSMRRVFHAFDEHYKDWDQVIQCLSVLDVLQSL
SYVSQASDGPMCRPQIISPTHNMQPFITIQNGRHPCISRTFTGGDFIPNDTYIGTTDDNA
METNADPAETDKSCCVLVTGPNMGGKSTLMRQVGLMVIMAQLGCFVPADQCRLTPVDRVF
TRLGARDNILSGESTFFVELSETASILQHATRHSLVLMDELGRGTATYDGTAIASAVVME
LSGRIKCRTLFSTHYHSLVEEYGHDANIQLGHMACMVENENEEDPSQETITFLYKFAAGA
CPKSYGFNAAKLANLPDEVVKVARKKAHDFEMSADRLKAFRTLHRMSPTPDLRNNMRNLQ
QMIQA
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaacaccctgttttcctacttttcaaagagtccagctgtagccaggaagtcg
acctcaccattgacagctgacgatgttggaaatgagaaatccaagtcgccaaaagaggca
gcgaagggaccggatcagtcagtgaaggggaacggcgcagacgattgtgccttcaaagtt
ggagatgtcgtctgggcaaagctagaaggctacccatggtggcctagtttggtgtgtaac
cacccaactcttaacactcacatcaagcaaggaaagaaacgtcaagttcatgtacagttt
tttgatgagtcccacagtagatcttggatttttgagaaatatgtggagacgctcaaactg
aaagattctgagcgtggaggcaagtttcatacccagaaacttgatgtctgccaagcagta
aaggaagcaaaaggtgcacttgatctgagtgtagaggacaggctacaacttatcatgtgc
acccaatcagatgaagagcaggaggagcaagaaatgaaagttaatggaagcagtgcagat
aagtcaagctccagcgatgaggatgacatggaggaagaagaggaagagataagggagaaa
tccaagaagatgcttcgagcatccacgagacagacacctctctcgacagcgtcacgtaag
aggagacgtatcattgagtcatcggatgatgacgagagctcaggtgatgagtacaaacct
catgtaggagactcaggctcgtcagacagtgatagctcaggtgttgatgagaatgaaacc
tcagaagcttctttaatgtctgagagcgggacacctcagaaatctcgaaagaggaagcga
ggatccagctctcggacctctgtcacatcaggaaataaggtcactagacctgttttcagt
gtcatgacccctgacccacctaaacctaagatggtcgcgcatgaccctaagatggttgca
tctgaaccgaagatggtcgcgccagtgacgccccaacccaaaaagacgtttcttacacca
accatgagcgccaagacaaaatccagacttacaagtttccaaacaccagagtcgagccca
agtcctagcactcctcttgattcagatgaaactcgatatccacatcaacgatatgaatgg
ctaaaagacggccatcgaagggatcttaaaggaaatccacaatctcatcctgattatgat
ccaaggactttgtttgtgcccaagtctttccaggaaaagactacaccagcaatgcggcaa
tggtgggcaatgaaatcacgcttcttcgatactgttctcttctttaagatggggaagttt
tatgagttctaccacatggatgcagaagttggtgtcaaagaacttggtctgatttacatg
aagggtgaaaatgcccactcaggtttccctgagattgcttatggtcgctatagtgataca
ctgatacagaaaggttatcgagtagccagggttgagcagacagaaacacccgacatggtg
caggaacgttgcaagaaaatgtccaagatggcaacaaagtacgacaaagttgtgaaacga
gaaatttgtcggatttccacaaaaggtacaaggacgtatagttttatagatggcgataca
tgtgaggctcagcatagctacctgttggctgttaaggagaaagtgtctgatgataccact
gaaggggagagactttacggagtctgcttcgtcgatacatcaatcggaaaatttcatttg
ggacagtttacagatgaccgccactgctcacgcttccgaacactgattgctcactacaat
ccagctcaggttctgtttgagcgaagcaaactctctcccaagacgcagcagattttgtcc
aacaatctcctgtccgtcatcaaggagcctctagtcccggggacggagttctgggattca
agtaagacccttaagattctatcagagaacagatactttgaggatgatgatgggaagaag
agcaaggaagatgagaacaaaggaggaatgccatccgtgcttcaaaacatgatctctgat
gcggatacccttgggcactcagccaaggactccagtgagttagcagtcagtgctttagga
gcctgcacctggtatctcaagaaatcttgcctggaacatgagcttctttcactgtgtaac
tttgagctctacgtacctctagatgtagagtcggtggtcaaggctgatgtggtgaatttt
gcagccggcagacaacatatggtacttgatggtgtcacattgtacaacttggacatcctg
gagaatggcacatctggaacactagagggcacacttctagagaggctagaccaatgctgt
acaccatttggaaagaggctgttcaaacaatggctatgtgcccccctgtgtaatccaaag
tccatcaatgataggcttgatgctgttgaggaccttatcaatataccagacaagatggca
gaggtcaacgacctcctgagacaacttccagacctggagagactgctgagcaagattcac
accctagggctggctagaagcaacttggatcaccctgatagtcgcgccatcttctttgaa
gacacactttacagcaagcgtaagatacaggacttcctgacagctcttgatggattcaaa
acttctatcaagatcatacacatcttcaaaaactctacctcaaactttaaatctaagcta
ctgaagaaaacgctgactattgtagatggggatgtgggatcagtgcaagggcgttttcct
gacctcaccaagcatctatctttctttgataatgcgtttgaccacagaaaagctaaagag
gccggagctattgttccaaacaagggtgttgaccccgagtatgatggcgccatcgctgcc
atgaaatcggccaatcagaggctggatgattatctagataaacaacgcaaaaggcttggg
tgtaagaccatcacctactggggaacaggcaagaaccggttccagctggaggtaccagag
agcgccctctctcgccacacccctgaagactatgaattgcaatcatctaagaagggattc
aaacgatactggactatcgagattcaggagatgtttgctgatcttgtttctgaagaggag
agacgaagtgtggctctacgagactccatgaggagggtctttcatgcttttgatgaacac
tataaggactgggaccaagtgattcagtgtctttctgttctggatgtactacaaagcctc
tcatatgtcagtcaggcctctgatgggccaatgtgccgaccacaaatcatttcaccaact
cacaatatgcagccattcatcacaattcaaaatggtcgccatccatgcatcagtcggaca
ttcactggtggagacttcattcccaatgatacctacattggaactactgatgataatgcc
atggaaacgaacgctgacccagcagaaacagacaagagttgctgtgtactagtgaccggt
cccaacatgggaggcaagtccacactaatgaggcaggtcggactgatggtcatcatggcc
cagcttgggtgttttgttcctgctgaccaatgtcgtctcactccggtggatcgagtcttt
acacgtcttggggctagagataacatactctctggagagagtactttctttgttgagttg
agtgaaacggctagtattctacaacatgccacacgtcattcattagtcttaatggatgaa
ttaggacgaggaacagctacgtatgatggtacggccattgctagcgctgtagtgatggag
ctctctgggagaatcaaatgccgaaccctcttctcaactcattatcattcattggtcgaa
gagtatggacatgatgccaatattcaactaggtcatatggcttgtatggtggagaatgag
aatgaggaagatccaagtcaagaaacaatcaccttcctttacaagtttgctgctggtgca
tgccccaagagctatggcttcaatgctgctaaacttgccaacctaccagatgaggttgtg
aaggtagcaagaaagaaagcacatgactttgaaatgtctgcggacagactaaaggcattc
agaacactacacagaatgagtccaactccagacctacgtaacaatatgaggaatctacag
cagatgatccaagcctga
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