Luidia clathrata (European starfish): 117302118
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Entry
117302118 CDS
T10152
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03013
Nucleocytoplasmic transport
arun03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117302118
mRNA cycle factors
P-body specific factors
117302118
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
117302118
NCBI-ProteinID:
XP_033641812
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Position
2:8507047..8558892
Genome browser
AA seq
1733 aa
AA seq
DB search
MKMAANLDSKEGLKEDDNNGEFSVGDKIDGVKDDSISSSQALTEEQGTSENCSQDVVQDV
NNPGTSDEHCQGDSSHGAEAKIDETLKDAIIDDVVAVSKEPVSENAPLKAEDGESNHLMD
AQKEPLEEAVSSDDLATPILQSDTSKELSYNVSIENVSESPQLDTMNPNESISNAEAELT
DDKNETESTLIEQEDTKKTVETSKASMQGDTQDSPQNSGSSKLSSGDGADQMVPTLVSER
DTNETGHVKGQCGDGGANVDSADDVKVITESVKSLVILPNPAPEETEKVSTTEKGDVRAK
SVQDTANLNNNAKGQSSTSESKTEAKSTSSTSRQESSKTSSAKQDAPSQDSARDRAGKSY
SAQRVANRGTRGKGAASPDPKTPTKQEAPKPIDGRARSDSAKEKVVLTTKEKAILPEDAV
KAKDKGKHASEHGREKTSGRSRDGDREAERRITDRRRDKDRRPSDPAPVIKKPVKTKEEL
EKEEAERKRRDEEQKKIEMEKKEAEIKRQEEEEQRLLEESNAKLAEEEQKQAFEIAAEAV
QRKEAKLRLRAKNLAAAAERPDESFFMKLDSSMKKNSTFVRKLKTLTEQQRDSLTAEFNS
LNLTKYVGEVATAIVESKFKMADISCAVHICSLVHQRYAEFSAHLQQAIQKCHPAQAKKE
DSKETKKEPVLFDSRIRVELRFLAELIVGGVFTEKEGLPSLNTLLSSVLKADKENHTHIS
IISSFLKHCGEDYAGIVPRRNRILADKFNLTLPVSEIFSAQRKNAYKGLLKEHYLSLTKH
LLKEHRDLQSVEKQNRRILQTKGELSEERRKRYNEIQASYQKLLVNTSHYADLIDEVMPD
LPEAEISPEEREMMALDFMTADHSKAEFDFETSLWEDEDTRTFHENLIDLRTMVPGILFK
DSEKKGSPDEKQEELAQLGEDIVALEQTDDTEVVTTEEAEAAEMAPNEEQEVTTEDEIIV
EEVESTSEPDLDDTEEEEEEHDKTTNMSKKILLDTFLQRLPQCVNRDFIDKAAVEFCMDL
NTKINRRKLIKALFNVPRTRLDLLSFYSRLVATLYPCMPDIGTELVEKLKADFRWHVRKK
DQMMIETKIKTVRFIGELTKFKMCSKSDTLQCVKILLQDFRHHNIDMVCNLLDSCGRFLY
RSQDSHLLTKALLELMMRKRNKLHLIERHSTMVENTFFYCNPPEVKQAVMKERPILHEYV
RKLIYRDLSKTTTEKVLKQLRKMDWNNVEIKMYITKCLSSVWNVKFNNVHCVASLLAGLV
PYHDDVGIQVVDAVLEDVRIGMEINHAKYNQRRVSMVKFLGELYNYRMVESAVIFKTLYS
VIRFGISLDGAYNPLDPPEHLFRLRLVCTLLDTCGQFFDRGTSKKKLDCFLVYFQQYIMY
KRSLPIWNPQLPFPLDVDNALADTLETLRPKLLIYSTLDEASEAVTELEKEQVQKLGAVL
PMALASVNGQQQGSHSLGMITEGDENKTTNPTEPAVDFTSINEDEEISDSDSEADGVSRR
GMQHTGEGHTNNSQSQGQSQNTGDEEGLDIDDHMALDSAGETEDDDTVTMLTGGPKFIKC
DEDEDFTTEFDKMLSDSVQQRTVEAVKVPQQDIAIPAHARPRPKKATFDIFHPDSQEEEE
EEEQATSVNFVLMMRRGNKQHYHEFEVPKSSELAANLRNREQLALAEKKRLKELTLNIND
RQEEEDYQEMMSQIQKPPIPVPVVTKERKSKFHHPKGAPDADQIFNSYGNRKW
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggccgcaaatttagacagcaaagagggtttgaaggaggatgacaacaacggt
gagttttctgttggagataagattgatggagtcaaagatgattctatttcctcgtctcaa
gctttgacggaggaacaagggaccagcgagaattgctcccaagatgttgtacaagatgta
aacaacccaggaacatcagatgagcattgccaaggagacagcagccacggcgctgaagca
aagattgatgagaccctcaaagatgcaatcatagatgacgttgtcgcagtgtcgaaagaa
cctgtcagtgagaatgcaccgttgaaggctgaggatggagaaagtaaccatctcatggat
gcacagaaggagcctcttgaagaagctgtttcctccgatgacctcgcgacacccatcctt
cagtcggacacgtctaaagaactatcttacaatgtctcgattgaaaatgtcagtgagtca
ccacaattagatactatgaatcccaatgagagcatttcaaacgcagaagcagaacttaca
gacgataaaaatgaaacggaatccactttgattgaacaagaagacacaaagaagactgtg
gagacatcaaaagcatctatgcaaggtgacactcaagactcgcctcaaaattccggtagt
tcaaaattatcctcaggagatggagctgaccagatggtacctactctagtttctgagaga
gatacaaatgagactggacatgtcaaaggtcagtgtggtgatggaggagcaaatgtggac
tcagcggatgatgttaaggtcatcactgaatcagtgaagtccttagtgatcctcccaaac
cctgctccggaagaaactgagaaagtttcgacgacagagaaaggagacgtgcgagcgaag
agtgtgcaggacacagcgaatttgaataataacgctaagggtcagagttcaacttcggag
agtaagacggaagcaaagtccacctcatcaacaagcaggcaagagtctagcaagaccagc
tcagcgaaacaagatgcaccaagccaagactctgccagagacagggcgggtaagtcttac
tcggcacagagagtggcaaacagaggtactcgcggcaaaggagcagcatctcctgacccg
aaaacaccaactaaacaagaagcaccaaaaccaatcgatgggcgtgctagatcggactct
gctaaagagaaggttgtcttaactactaaggagaaggctatcttaccagaggatgctgta
aaagcgaaggacaaggggaagcatgcctcggagcatggtcgagagaagacatctggtagg
tcgagagacggggacagggaagccgagaggagaatcacggacaggaggagggacaaggac
aggaggccgtcggatccagcgccggtgattaagaagccagtcaagaccaaagaggagctt
gagaaggaggaggcagagcggaagaggcgggatgaggagcagaagaagattgagatggag
aagaaagaagctgagatcaagagacaagaggaggaagaacagcgtcttttggaagaatcc
aacgccaagcttgcggaggaagaacagaaacaagcgtttgagattgcagctgaagcagtg
cagaggaaagaagctaagctacggctacgagccaagaacctggccgctgcagctgagaga
ccagacgaatccttcttcatgaaacttgattcaagtatgaaaaagaactctacatttgtc
agaaagctgaaaaccttgaccgagcaacagcgggattccttaaccgcagagtttaacagc
ctcaacttgaccaagtacgtcggcgaagtggccacggccatcgtggagtctaaattcaag
atggccgacatcagctgcgcagtgcacatctgttccctggtgcaccagcggtacgctgag
ttttcagcccaccttcaacaggcgatacagaagtgtcacccggcacaggcaaagaaagaa
gattcaaaggaaacaaagaaagaaccggtcctttttgacagcaggattcgagtagagctc
cgtttcttagcagagttgattgtcggaggagtgttcacggagaaagaaggtctaccttct
ctaaacacgctgctctcatcggtcctgaaggcagataaagagaaccacactcacatctcc
atcatcagcagcttcttaaaacactgcggagaagactacgccgggatagtgcctcgtaga
aaccgaatccttgctgataagttcaacttgactctcccagtgagtgagatcttctccgcc
cagcggaagaacgcctacaagggactcctgaaggagcattacctgtctctgaccaagcac
ctactgaaggagcatcgggatcttcagagtgtagagaagcagaatcgaagaatattacaa
actaagggagagttgagcgaggagagaaggaagcgttacaatgagattcaagcttcgtat
cagaagctcctggtcaacacgtctcactatgccgacttaattgatgaagtcatgccagat
cttcctgaagcagaaatcagcccagaagagcgagaaatgatggcgctagatttcatgact
gctgaccactccaaggcggagtttgatttcgagacgtctctatgggaggacgaagacaca
agaacattccacgagaatctgattgatctgagaacgatggtgcctgggattttattcaag
gacagcgagaagaaaggatcccccgatgagaaacaagaagagttagcccaactaggagaa
gatatcgtagctcttgagcaaacggatgatactgaggtcgtaacaacggaagaagcggaa
gcagctgagatggcgcccaacgaggagcaagaagtcaccacagaagatgaaataatcgta
gaagaggttgagtcaacttcagaacctgatctagatgatacggaggaagaggaggaggag
catgataaaacgaccaacatgagcaaaaagattctcctggataccttcctacagcggctg
ccgcagtgtgttaatagagacttcattgacaaggcagcagttgagttctgtatggatttg
aacaccaagatcaacagacgtaaactgatcaaggcattattcaatgtcccaagaaccaga
ttggatcttctgtccttctactctcgtctggttgccacactgtatccatgtatgccagac
atcggcacggaacttgtcgaaaaactcaaagctgacttcaggtggcacgtgagaaagaaa
gaccagatgatgatcgagaccaaaatcaaaacggtccgatttatcggggagctgactaaa
ttcaagatgtgttctaagtctgatacattgcagtgtgttaagatacttcttcaggatttc
cgtcaccataacattgacatggtgtgtaacctgctagacagctgcggtcgtttcctctac
agatcacaagactcgcaccttctcaccaaggctctattggaattgatgatgcggaagagg
aacaagctacatctgattgagcgacacagcacaatggttgagaatacattcttctattgt
aaccctcctgaagtaaaacaagcagtgatgaaagagcgaccgatcctacatgagtacgtt
cgtaagctcatctatcgtgatctgtctaagacaaccacggagaaggtcctgaaacaactg
cgcaagatggactggaacaacgtggagattaagatgtacatcactaagtgtctaagcagt
gtctggaacgtaaagttcaataatgtccactgtgttgctagcttactggccggtctggta
ccctatcatgacgatgtgggtatacaggttgtagatgctgtcttggaagatgtcagaatc
ggcatggagattaaccatgctaagtacaaccagcgtcgtgtttccatggtgaagttcctc
ggtgagctgtacaactatcgtatggtagagtcggcggttatcttcaagaccttgtactca
gtgattcgctttggaatctctttagatggagcttacaatcccctggatcctcctgagcat
ctgttccgcctccggctggtctgtaccctcctggatacttgcggacagttcttcgatagg
ggtacaagcaagaagaaactggactgctttctggtgtactttcagcaatacatcatgtac
aagcgcagcctcccaatctggaacccacagctcccgttccctctggatgtagacaacgcc
ttggcagacaccctggagacgttgagacctaaactgctcatctactccacactggacgag
gccagtgaggctgtgactgagctggagaaagaacaagtccaaaaactaggagctgtgttg
ccgatggcactagcttcagttaacggccagcagcagggatcacattctcttgggatgata
actgaaggtgatgagaataaaaccaccaatccaacagagccggccgtggatttcaccagc
atcaatgaagatgaagagatctcagattctgactcagaagcagacggcgtgagtcgcagg
ggaatgcaacataccggagagggacacaccaacaacagtcagagtcaagggcagagtcag
aacaccggagacgaagagggattggacattgatgatcacatggctttagattctgctggt
gagactgaggatgatgatacggtgaccatgttaaccggaggtcctaagttcatcaagtgc
gatgaagatgaagatttcaccacggagtttgacaagatgctatcggacagtgttcagcaa
cggacagtggaagccgtcaaggtgccccagcaagacatcgctattcccgcccacgcccgg
ccacgccctaagaaggcgacctttgacatcttccacccagactcccaagaggaagaggag
gaagaagaacaggcgacgtccgttaactttgtgctgatgatgcgtcgcggcaacaagcaa
cactaccacgagtttgaggttcccaaatcctcagaacttgccgctaatcttagaaacaga
gaacagttggcactcgctgagaagaagagactgaaggaactgactctgaacatcaatgac
agacaggaggaggaagattatcaagaaatgatgtcacagatccagaagcctccgattccg
gttccggtggtcaccaaggaacgcaaatccaagttccatcacccaaagggtgccccggac
gcagaccaaatattcaactcctatggcaaccgaaaatggtga
DBGET
integrated database retrieval system
