Luidia clathrata (European starfish): 117302155
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Entry
117302155 CDS
T10152
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04120
Ubiquitin mediated proteolysis
arun04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117302155
04120 Ubiquitin mediated proteolysis
117302155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arun04121
]
117302155
Enzymes [BR:
arun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117302155
Ubiquitin system [BR:
arun04121
]
Ubiquitin ligases (E3)
U-box type E3
117302155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
SNaCT8
Motif
Other DBs
NCBI-GeneID:
117302155
NCBI-ProteinID:
XP_033641853
LinkDB
All DBs
Position
18:complement(6370937..6391861)
Genome browser
AA seq
1146 aa
AA seq
DB search
MSELTPDEIRRRRLARLDGRSAATSKTPQAGIDLASEPCGSSVKPNNADSKEMVQERIPE
APKPQEADSVLEKPRLSGMETDESQSSQSQAAESMESALNVHDSLDSGFPASMEMDSESC
DQGSQSQMDVDSGIENPELEETDKKVKKLSAEKEPSQKTLSEADLLQMVSRIFRVSWKEQ
GRDVVYLAGLATEFAEEPEQVFSNTEDLIGQVMMEVLTQHACTGNPFANLSASSSTVSAA
STGGHSPQSSSQQPAPQPSSAGDQCGREPENPESEMLSYLLQSYRRVMAEERASPKRYSQ
TQFKRLVSSARSQCVYHAALVLQGAFTQPGNAPSMLLPHLLAHSLPTSFLRDLVAATHED
ASSFGLIFTPVLVGLVQEIQRCSLDNDKYKASLTAMNELCKIKLGNSKPICKLITSLPEW
LPDPITGAAGREVEKLSLLGAFLSLSVFAEDNTKVVEKYFSGPMLTQDDIRLLNESLQHH
LHYVRKELHDIVHSILVNSDSREAMVTYFATVIKRNHKRAQMQVDESLVAGDGSMLNLLV
ILQKLSTKITLDMIDVMYPHHPKSLIDIANDTRLKATSQEATEWVEQTKKPPTSWADPKF
PTQCYFLTLHCQHLALMPACRHFTRRIRGMRELARMVEEMQGQEEQWKGTPNERRNRQLL
DKWKSQIKKLDKAKMCGDAGLLDETLLRNCFQFYGSVMSLLLMMLKPKDQERISLPLPKE
VPMEFATLPEHYIEDIAEFILFTVQHCPQALEDTAQQDMVQFIVTIICSAHCIRNPYLVA
KLVEVVFVLSPAVQAKTAKIYEAIQLHRLALNHLVPSLMTFYTDVEQTGASSEFYDKFSI
RYHISIIFKSLWRLPMHQNAMVRFSTTQSEFVRFINMLMNDTTFLLDESLACLKRIHEVQ
EAMKNKEAWNALDQEERQGKTRQLSTDERQCRSYLTLANETLEMFNYLTNVIKKPFLRPE
LCDRLAAMLNFNLQQLCGPKCNDLIVENKDKYGFQPRKMLDRLTTIYLNLDSEELAVALA
NDERSFRAELVKDAIHFLYKFKTHSEIQQFSKLMDRASEIRTRIQQQEMDFDDAPDEFKD
PLMNTLMYDPVILPSGHIMERKIIERHLLNSQTDPFNRQELTSDMLEPATDLKQKILEWM
QSKSTL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcttactccagatgagattcgtagaaggcgtctagcccggcttgatggccgc
tcggcggccacttcaaaaactccacaagccggcatcgatctggccagtgagccctgtggg
tcctcagttaaaccaaataatgcagatagcaaagaaatggtccaagaacggatccctgag
gcacccaaaccacaagaagccgatagtgtcttggaaaagccaagactcagtggcatggaa
acagacgaatcacagagcagtcaaagtcaggcggctgaatcaatggagagcgccctcaat
gttcacgacagtctggactcgggatttccagctagtatggagatggattcagagtcatgt
gaccagggaagccaatcccagatggacgtggactcagggatcgagaacccggagctggaa
gaaacggacaagaaagtaaagaaattgtctgctgaaaaggaaccttcccagaagacactg
agtgaagccgatctcttacagatggtgtctcgcatctttcgcgtatcgtggaaagaacaa
ggaagagacgtggtatacttggccgggctggccactgagttcgccgaagagcctgaacaa
gtattttccaacacggaggacctgattggtcaagtgatgatggaggtgctaacgcaacat
gcgtgcaccggtaacccgtttgcgaatctctccgcaagctcatctacagtgtcagcagca
tccacagggggccactccccacaaagttcatcacagcagccggctccacagcccagtagt
gctggggaccagtgtggcagggaaccagagaatcctgaatcagagatgttgtcatatcta
ctccagtcttaccggcgcgtcatggccgaagagcgtgcctcgcccaagcgttacagtcag
acacaattcaagaggctagtctcttctgccaggtcacagtgtgtttaccacgcagcgtta
gtcttacagggagccttcacacagccagggaatgctccgtccatgcttctgccacatctt
ctagctcactctcttcccacgagcttccttcgagacctggttgctgccactcacgaagat
gcatccagttttggattgatatttaccccagtgttggtgggtcttgttcaggagatacag
agatgctccctagacaatgacaagtacaaagcatcgttaactgcaatgaacgagttgtgc
aaaatcaaattaggaaactccaaacctatatgcaagcttattacgtccttaccggagtgg
ttaccagaccccatcactggcgctgccggcagagaagttgaaaaactctctcttttagga
gctttcctgtcactctccgtctttgctgaagataatacaaaagttgtcgagaaatatttc
tctgggccgatgttgacacaggacgacattcgactgctcaatgaaagtttacaacaccat
ctacactatgtcaggaaagagctacatgacattgtgcacagcatcctcgttaactccgac
agtcgagaggcgatggtgacgtactttgcaaccgtcataaaacggaatcataaaagagca
cagatgcaggtggatgaaagtctcgttgccggcgatggatccatgctgaatctcttggtc
attttacagaaactcagcaccaaaattactctagatatgattgatgtgatgtaccctcat
catcctaaatcccttattgacatcgccaatgacaccagactaaaagcaacatcacaagag
gctactgaatgggtggagcaaaccaaaaaacctccaacgtcttgggctgatcccaagttc
ccgacccaatgttacttcctgacgttgcactgccagcacctagccctgatgccggcgtgt
cgtcacttcacccggcgtatccgggggatgagagagcttgcccgcatggtagaggagatg
caaggacaagaggagcagtggaagggcacgcccaacgagaggcgtaaccgacagctcctt
gataaatggaagtcacagataaagaaacttgataaagccaagatgtgcggcgatgcaggc
ctcctagacgagacactcctcaggaattgcttccaattctacggctcggtcatgtccctt
cttctgatgatgctcaagccaaaggaccaagaaagaataagtctacctctgccgaaggaa
gtgcccatggagtttgccacactaccagaacactacatcgaagatattgctgaattcatc
ttatttactgtacaacactgcccacaagctcttgaagacactgcccaacaagacatggtt
caattcatcgtgaccatcatctgctctgcccactgtatccgcaacccgtaccttgtcgct
aagctagtagaggttgtatttgtcctgagtccagcagttcaggcgaagacggcaaagatc
tacgaagctatccagctacatcgactagctttgaatcacttggttccctctcttatgact
ttctatacagatgttgagcagaccggtgcgagcagcgagttctacgataaatttagcatc
cgctaccacattagtattatcttcaaatcgctatggcgacttcctatgcatcaaaatgcc
atggtcagattcagcacaacgcagtctgagtttgtacgttttatcaacatgctgatgaac
gacactacattcctactggatgagagtttagcttgtctaaagagaatccacgaggttcag
gaagccatgaagaacaaagaagcatggaatgctttggatcaggaggaaagacaagggaag
actcgccagctctctacggatgaacgtcagtgtcgatcctatctgacattggccaatgag
actctagagatgtttaattacctcactaatgtcatcaagaaaccattcctaagacccgaa
ctttgcgatcgtctcgctgccatgctgaactttaaccttcagcagttgtgcggaccaaag
tgcaatgacctcattgtggagaacaaagacaagtacggcttccaaccgcgcaagatgctc
gaccgactaaccacgatctacttaaatctggacagcgaggaactggctgttgcccttgcc
aatgatgagcgctcgttccgagccgagcttgtcaaagatgcgattcacttcctctacaaa
ttcaagacgcattcagagatccagcaattctcaaaactgatggatagggccagcgagatc
cgaacaagaatccaacagcaggaaatggactttgatgacgctccggacgagttcaaagat
cctctgatgaatacactaatgtatgacccggtcattctcccctccggtcatatcatggag
agaaagatcatcgaacgtcatctcctcaactcccagacagatcccttcaaccgtcaagaa
ctcaccagcgacatgctggaaccagccactgatctcaagcagaaaatcttagagtggatg
caatccaagtctacactgtga
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