KEGG   Luidia clathrata (European starfish): 117302363
Entry
117302363         CDS       T10152                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
arun  Luidia clathrata (European starfish)
Pathway
arun03020  RNA polymerase
arun03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:arun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117302363
  09124 Replication and repair
   03420 Nucleotide excision repair
    117302363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arun03021]
    117302363
   03400 DNA repair and recombination proteins [BR:arun03400]
    117302363
Transcription machinery [BR:arun03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117302363
DNA repair and recombination proteins [BR:arun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117302363
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 117302363
NCBI-ProteinID: XP_033642175
LinkDB
Position
18:complement(3994892..3998188)
AA seq 144 aa
MATPGGAVLPNQDEIEEDASELKFSKEFEQAETLLNSEVRMLLEHRKQQNESQEEEQELS
EVFMKTLNYTERFSRFKNRETIADVRGLLQQQKLHKFELASLANLCPENAEEAKALVPSL
EGRFEDEALQEVLDNIQTKRSFQY
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcgactcctggaggggcagtacttcccaatcaagatgagattgaagaagatgcatct
gaactgaaattttctaaagaatttgagcaagcggagacgttactgaactccgaggttcgt
atgctccttgagcatcggaagcagcagaatgagagccaagaagaagagcaggagctgagc
gaagtcttcatgaaaaccctaaactacacagaaagattctccagatttaagaacagggag
acaatagcggatgttagaggcctcttacaacaacagaagctgcataaatttgagcttgcg
tcgttagcaaacctctgccctgagaatgctgaggaagccaaggccttggttccaagcctt
gaaggacgatttgaagatgaagcacttcaggaggtcttagacaacatccagactaagaga
agcttccagtattaa

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