Luidia clathrata (European starfish): 117302508
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Entry
117302508 CDS
T10152
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arun03009
]
117302508
Enzymes [BR:
arun01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
117302508
Ribosome biogenesis [BR:
arun03009
]
Eukaryotic type
Other ribosome biogenesis factors
117302508
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
FtsJ
RsmF-B_ferredox
Fibrillarin
Motif
Other DBs
NCBI-GeneID:
117302508
NCBI-ProteinID:
XP_033642361
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All DBs
Position
18:7538785..7544539
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AA seq
582 aa
AA seq
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MLYKHASKIIDQIQKKQGTIKSLIHSSGYKNLKQLYALVCETLKYSSIIDKILVTTKFLE
LEKWLDRPMATILVYEALFGRGIQCGGKHRLAIKRHKSSLNAALVRMKIKMGVVNNKDLL
PDSVKDEVILPRYVRVNTLKISIEDAINQFVKEGFKCVLTQQEAVTVSKDAENAQSLSTM
FRDLVNSLKKSQFMCDVHVQHILVFPPGTDFHKHQLYLTGAIILQDKASCLPAYILAPPP
GSHVIDACAAPGNKTSHLAAILENTGRVFAFELDPKRLSLMSRLTKPTGATNLDLTNHDF
LKVNPTDEKFRNVNYILLDPSCSGSGIVSRLNHLTNDDQSESQDRLESLARVQTALLSHA
LSFPNVKRVVYSTCSVHRRENEEVVKEVLDSHPEFQLECALPAWKNRGIGDKDHTDDWKN
PSDMKLFDFQACLRAVPKEDITIGFFVALFERKDISIRTKESPCVPTSQNGKLSKVGQRK
KRRNKHKSVEIKKEIISMDSSENQSKNNSPLETGISKRKSRKRRKKTQGESDSKKQKIDN
IKKLDEHKTKQETEEAINENANKVTKMKKAKRNRRQKTAAIS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgttgtataaacatgcctccaaaatcattgatcagattcagaagaaacaagggaccata
aagtctcttattcattcaagtggttacaagaatctgaagcagctttatgctttggtctgt
gaaactctcaagtactcaagtatcattgataagattctagtcaccacaaagttcctggag
ctagagaaatggttagatcgacccatggcaacaattctagtctacgaggcattgtttgga
agaggaattcaatgtggtggaaagcatcgtttggcaatcaaacggcataagtcttctctc
aatgctgctcttgtcaggatgaagattaagatgggtgtggtcaacaacaaggacctcctc
cctgactccgtcaaagatgaagtgattctgccaaggtatgtgcgagtcaacacattaaag
atttctatcgaggatgctatcaaccagtttgttaaggaaggctttaagtgtgtactgact
caacaagaagctgtcactgtctctaaagatgctgaaaatgcacaatctttaagtaccatg
ttcagagacttggtgaacagtttaaagaaaagtcagttcatgtgtgacgtacatgtacag
catattctagtgtttccaccgggtaccgacttccacaagcaccagttgtatctaacaggg
gctatcatactgcaagataaggcaagttgtcttccagcttacatcttggccccgcctcca
ggaagtcatgtgattgatgcctgtgcagcccctggcaacaagacgtcccacctggcggcc
attttagagaatactggacgggtgtttgcattcgagttggatcccaaacgtctctctctg
atgtccagactgaccaaaccaacaggagcaacaaaccttgacctcaccaatcatgacttc
ctaaaggtcaacccaacggacgagaaattccgtaatgtcaactacatcctcctggatcca
tcttgcagtgggtctggcattgtcagtaggctcaatcacctgaccaatgatgaccaatca
gagtctcaagataggttggagtcgttggcaagggtgcagactgcactactgtctcatgcc
ctgtcatttccgaatgttaaacgagtggtttattctacttgctcagtacacaggagggaa
aatgaggaagttgttaaggaagtgctggattcacatccggaattccagctggaatgtgct
cttcctgcatggaaaaatagaggaatcggtgataaggatcacacggatgattggaaaaat
ccaagcgatatgaagctgtttgactttcaggcttgtttacgagcagtacctaaagaggat
ataaccattggattctttgtagcattgtttgaacgaaaagatatttcaataagaacaaaa
gagtctccttgtgtaccaacttctcaaaatggtaagttgtcaaaagtaggccaacgtaaa
aagagaaggaataaacataaatctgttgaaatcaagaaagagattattagtatggatagc
agtgagaatcaaagcaaaaataattctcctctggaaacagggatatcaaaaaggaaaagc
cggaaaaggagaaagaaaacgcagggagaatccgactctaagaaacaaaaaattgacaac
ataaagaaactggatgagcataaaaccaaacaagaaactgaagaggcaataaatgagaat
gcaaacaaagtaaccaaaatgaaaaaagctaaaagaaacaggagacagaaaacagctgcc
atttcatga
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