Luidia clathrata (European starfish): 117302984
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Entry
117302984 CDS
T10152
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117302984
mRNA cycle factors
Common to processing body (P body) and stress granule
117302984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
117302984
NCBI-ProteinID:
XP_033642886
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All DBs
Position
19:1581802..1618795
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AA seq
1396 aa
AA seq
DB search
MFCEQLLRKANERKAEIIEGRGDPWVTRQQLRELYQQLLVTDLEFALDKKVEQDLWNHAF
KNQISALQRKAKDKMNPKRSEVQAMLTLFLDSGSGFYLQLLQEVCCSFKLDIPCCVRAPR
LGMQSDQRVPVSGGQHKVATPECCSILYICQHCLVHLGDLARYRNETNQSESYYLQAAHL
VPSNGQPYNQLAIVAASKADQLAMTFYYIRSIAVKHPFPAAATNLQTTFSKLVDRDEVKL
FKMKEIELIHFFIKFHAIIYLAVGDQDLQIASAIKEKLEENFRSHLSQETLTAQQLVQIA
SINLFALYCVFMRQQETAEGGAITTETVKGSGEIQEGCYAADETRSWNLVFGLTMTLLQL
MLHYTPGKSEGKPLQWCGLPAVKVILDWVVYQPSLFQDPFMSAKSVMWGKLARVLNSIQS
DVKSLPKYSKVPLPEDVSLNEFLPLQEIHSSVEFTAFNQQPLTEETQQAERATRLVAHGK
WVAQKYPDHLKAELANEGAAKVTFTSQSGEEQTRRQHHQKQKQPKTPSQQQQQQQRQNKH
QQSTISVGHGGQRAKKVQVREGPQKRDSSTEPAIGERERGVKSSGAPKGNDGNTENKTHS
VAIQAILPRPSQTSSTETTTRSTEPIPIPVNSRSLAADGKGPQDHTPVHSPAQTQGRQHP
YQSPTHSPSSGFRHPVGQPMRHHPPPSWPNHPQYPPHGPPHPHSYPRGHPPTHQQGPRPP
HQGGPPPHLQQGLPPSHQQGPSQGATPHHPPPAHPQGPPPSLPSGPHQQGMPPHIHPPQG
PRPNFPGAPIRQRPGYPPGEITPPMWQQKHDGPSGYEFGHQQPPHASQSHPPGKTGMWPT
GPTPSSTADASRASQGWGGGNQIPSQNRGQTGRQNPIHMGGRDGSQIQQQPYIHLDQAMP
PHLGIQKDQEIQEHGSGAKMDPFQMQKQQQEHSAQQALQKSFPPPPNQPHQDMELTLESM
KMAQQLMSQNTLSQNILDLLSTLNKQIQQSSEIPADASSSMQSFLEQQIGSGNTLDTQSL
ALLSQLAQQSASIPDTPSQRFLGSSLNKEQFAARKQPSPVQKPFQSSFPGSRNFSAQDQP
SPRFVGDENHPYRSPQHIAYPQLSPEHKTQVYPSSFEEQTSLFRSSPSQLQQQQQQRIQP
DWSIDDGSDGRGTPTSPPTLFPTNEEVSKMKNVPGFSTWPDQFSVCPMDDYQPQRTREVP
KLLSPASSNSSLGLASTPSSQPSLQTTPTFLGPQGYGSTPSNNRRYDNGGSGLFSDSSER
KSSLEDSTLASSSGYSLFSYSSPWAGGSKEGGHNLTPSPFSSSPSSPRSQSPSVQGGQMM
SKNLGGLGGGLGWGGERGATAWSNPALGNQLSSSPTSGLLPDSIQSIWATPLGSSSSHKP
SPLEELLKRQQMTDQR
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtgagcagttattacggaaggcaaatgagcgcaaggctgagattattgagggc
cgtggtgacccatgggtcactcggcagcagttgagggagctgtaccagcagctcttggtg
acagacttggagttcgccctggacaagaaagtggaacaggacctgtggaaccatgctttt
aagaatcagatatcagctttgcagcgcaaggccaaggacaaaatgaatccaaaacgaagt
gaagtccaagctatgctgactctgttcttagacagtggtagtggtttttatctacagctc
ctgcaggaggtgtgttgttccttcaaactggacatcccgtgctgtgtgagggcaccgcgt
ctcgggatgcagtccgaccagagagtcccggtcagtggtggccagcacaaagtggccacg
ccggagtgttgctccatcctgtatatatgccagcactgcctcgtgcaccttggagactta
gctcgctatcgcaacgagaccaaccaatcagagagctactacctccaggcagctcaccta
gtcccttccaacggtcagccttataaccagctggccatcgtggcagcctccaaggctgac
cagcttgccatgaccttctactacatccgcagtatagcggtcaagcaccccttcccagcc
gctgccaccaacctgcagacaacgttttctaaactggtggatagagatgaggtgaaactc
ttcaagatgaaggaaatagagctgatccacttcttcattaagtttcatgccattatttac
cttgccgttggggaccaagatcttcagattgcatccgccatcaaggagaagttggaggag
aacttccgcagccatctgtcccaggagacgctgacagcccagcagctcgtccagattgcc
tccatcaatctcttcgccctctactgcgtcttcatgaggcagcaggagacggcggagggc
ggggctattaccacggagacagtgaaagggagtggcgagatacaggagggatgttacgct
gctgatgagactaggagctggaatcttgtgtttggtttgacgatgactcttctgcagctc
atgctgcattacacaccaggcaagtcagaaggcaaaccgctgcagtggtgcggactacca
gccgtcaaagtcatccttgattgggtagtgtaccagccgagtctctttcaagaccctttc
atgtccgcaaaatcagtgatgtggggtaaactggctagggtcttgaacagcattcaatca
gatgttaagagcttacccaagtacagcaaagttccgctgcctgaagacgtcagcttgaac
gagttcttaccacttcaagaaattcacagctctgttgagtttacagcattcaatcagcag
ccactgactgaagagacacagcaggcggaacgagccacgagacttgtagcccacggcaaa
tgggtcgctcagaaataccctgatcatcttaaggcagaactggccaatgagggcgccgca
aaagtcaccttcaccagtcagagcggcgaggagcaaacgcgaaggcagcaccaccagaag
caaaaacagccaaagactccctcacagcagcagcagcagcagcagcgacagaacaagcac
cagcagagcaccatctctgtcgggcacggtggacagagggctaagaaggtgcaggtcagg
gagggtcctcagaagcgagacagcagcacggagccagcgatcggggagagggagagaggg
gtcaagagtagcggagctccgaaagggaacgatggaaacacggagaataagacacacagt
gttgctattcaggctattctaccaagaccaagtcagactagcagcactgaaaccacaacc
cgatcaacagagcctattcccatacctgtgaattctcgtagcttagcagcggacggcaaa
ggaccccaagaccatactccagtccactctcctgcccaaacacaaggcagacaacacccc
tatcaatccccgacgcactccccgagcagtggcttcagacacccagttggtcaacccatg
aggcatcaccctccgccttcctggcccaatcacccccagtacccaccacatggaccccca
cacccacactcttatccacgagggcaccctccaacccatcagcaaggcccacgtccgcct
catcagggcggacctccccctcatctccaacaaggcctgccaccatctcatcaacaaggt
ccttctcaaggagctactcctcatcatcctccaccggctcacccgcaaggcccccctcca
agcctaccctcagggccccatcagcagggtatgccaccccatattcatccccctcaaggg
cctcgccctaatttccccggggcacccattcgtcagagacccgggtaccctccaggagag
atcactcctcctatgtggcagcagaagcacgacggaccatctggctacgagtttggccac
cagcaacccccgcatgcatcccagtcccaccctccaggcaagacggggatgtggccaaca
ggacctactcccagcagcactgcagatgcctctcgagcatctcaggggtggggaggggga
aaccaaatcccaagtcaaaaccgcggtcaaacagggaggcaaaaccccatccacatgggc
ggcagagatggcagtcaaattcaacagcagccgtatattcatctggatcaagctatgcca
ccccacttgggaatccagaaagaccaggagatacaagagcatggctctggtgcgaagatg
gaccccttccagatgcagaaacagcaacaggagcactccgcacagcaagctttacagaag
tccttcccccctcctccaaaccaaccccatcaagacatggagttgaccctggaatccatg
aagatggcccagcagctgatgagccagaacacattaagtcagaacatcttagatctcctg
tcgacactaaacaaacagatccagcagtcgtcagaaatccctgcagacgcaagctccagc
atgcagtccttcctggagcagcagattggctccggtaacaccttagacacgcagagtcta
gctctactatcccaactcgcccagcagagtgcatccatcccagatacacccagtcaaagg
tttttaggctccagcctgaacaaagagcagtttgctgctcggaagcagccaagccccgtc
cagaaaccttttcagagctctttccccggctcccggaacttcagtgcccaggatcaaccc
tcgcccagattcgtaggagatgaaaaccacccctatcgcagcccacagcacatcgcatac
cctcagctctccccggaacacaagacccaggtctacccgagcagcttcgaagagcagact
agcttgttcaggagtagtcctagccaactccagcagcagcagcagcagcgaatccagcca
gattggagtatcgacgatggatctgacgggcgagggacgccaacgtcacccccgacactc
ttcccgaccaatgaggaagtcagtaagatgaagaatgtaccggggttctccacgtggcca
gatcagttctcagtgtgcccgatggacgactaccaaccgcaaagaacgagggaggtgcct
aagctactgagtccagcatcctctaatagtagtcttggtttggcatcgactccctcctcc
cagccttctcttcagaccacgcccacatttcttggtccccaaggatacggctcgaccccg
tccaacaacagacggtacgacaacggagggagtggtctgttttcggactcctcagagcgt
aagagcagcctggaggacagcacactggcctcgtcatcgggctattccttattcagctac
tcttcaccatgggctggaggcagcaaagaaggaggacacaatctgactccttccccgttc
tccagctctcccagctcgccccgttctcagtctccgagtgtccaaggtgggcagatgatg
tctaagaacctcgggggtctgggaggaggccttgggtggggcggtgagcgtggggcgact
gcctggagtaaccccgccctgggcaatcagctatccagctcgccaacgagcggtctgctt
ccagattctattcagtcaatctgggccactcctctaggaagctcctcctcccacaagcca
tcccctctggaggaattgctgaagcgccagcagatgaccgatcaaaggtga
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