Luidia clathrata (European starfish): 117303034
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Entry
117303034 CDS
T10152
Name
(RefSeq) laminin subunit gamma-1-like isoform X1
KO
K05635
laminin, gamma 1
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117303034
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
LAMININ_IV_B
Motif
Other DBs
NCBI-GeneID:
117303034
NCBI-ProteinID:
XP_033642960
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Position
19:complement(8048538..8098218)
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AA seq
1613 aa
AA seq
DB search
MTGSYSLDANNPDGCSLCSCSDGASLSGQCDATTGTCTCRPNIVGRACNETTPGFYVPKL
DQLTLEAELASADKVVSIEERPSSADTARHTGRGFLTISPNTIVTFADVVVPSTANYELV
LRYESAGIFQSVRIELTQQSPVPYECSGQSLPGTTISLVSDVQTAGVGGVQQFGAACLNA
AGVYNVSVITGFSSLGLFSSILLDSLVLLPVLNDLNVYASAMTSNLTREVMTSCWMAAVS
LDRIVRESGDCVMYEFSLMAEVYNGAIECSCNNGGHLLGTQCDSYSGQCQCLDGVTSQSC
DYCQAYYYGYSMQAGCTACGCDINGAQRQACDDLSGMCECHQNVIGIKCDACMPEHYGLY
TGTGCVPCTCSSNYSLDNACADSGQCSCKPGIGGQDCTECAAGFYQMTTDGCTYCDCNKV
GSTQSGCDSNGNCLCLEGTVGDKCDVCAEGFYGFGPWSERGCTQCYCSSHSTQCTSALSW
FRGQVVSSWSLLDFDAIAPRWTGVNGTDYSVDINEVPIFDLSNPRLILELSTPSNSTDFF
FVSPDIYHGDFRTAYGQNLSFTLSQTSDQDPSVNPEGDVFIEGMYVDELLVASLPFVPYA
DGNETEYNLKLHESYWRKGSPQGDQPTAEYVMQALTGIQSIRIRAKYNTVPGESVFLHSV
MLDYATQGDSGITEDNADFVENCTCPPQYTGSFCEQCAPGYRRSSLARGPFSDCVPCDCN
GHSDLPCDLDTGVCQGCSHNTGGDFCQLCLDGYRGDATGGTPGDCQPCLCPGSPDSVNSF
AAVCDAVGVCANCTIGHSGDSCETCINGFYGVPTDPMANGGQCVPCFCNLSPPECDTITG
QCLACQGNTTGQTCDVCDFGSWGMIDNCQECLCDSMGSYGNCSQTTGVCDCYPNVIGDQC
AECAMNTWGIASRSGCTLCDCHPVGTINQQTRCDLVTGQCECKPRVTGQKCDQCAQGYWN
IDQECIPCECSLEGTAPSTCNALDGRCTCDLVTGQCGCKVPTIAGRTCDRCGRVEEGSFP
NCEPCPECFQNWRKAFQDMADVFTQQQMTLEALLANYDGMTAMEVDTMLNFIRRNLTSAE
QAIELGTREVVDLEDVEAGYRQISMEIANFTALVAAIEAKQSVLTTSTNQVSSFSGNVIV
GDNMVRNAAQLGGELSTLVTALMSQFQLANGTWFTIQELNAAIEASYQHVQQLIRVVDGL
LQDIERSAMERQSAEVILNDNSRDAEYTTNAERLAAIEIIQADYPVASTFQDVQVAQTVA
QGANVTAEVTLAGVEAVQRQASAQAYQSEVARYNTTNAETAGSMAQSAAVTYKDVALSTK
ANMTSSYIQVLDTYTALQEAESRTINARDIAFAVQGMTVRPSSEIQTLVELINAASLSDT
DVENLRLESMNKLTRAEQTKRTAGEAQMEAETAGAQVQNLEYDLAEATRVREETSQRLQE
IDGNITAITTTASQVQAQAQEGYTSGQQTSSSIMSILQGVRNTEQCFSAKRNQAEDAANR
AGSAFGQASTAQQVFDSISQDDETTDMLLAAARVQSSADATVVQTSSDNANQLRDDINYV
QQIADLDALMTQYMTQRTQMQQLNSSLEGLETSLDAIMANLEGAEGGDLKCKT
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgactggaagttatagccttgacgccaacaacccagacggctgctctctctgcagttgc
agcgacggagcctccttgagtggccaatgtgatgccaccacagggacctgtacctgccga
ccgaatattgtcgggcgcgcctgcaatgaaaccacacccggattctacgttccaaaactc
gaccagttgaccctcgaggctgaattggcgtctgctgataaagttgttagtattgaagag
aggccatctagtgcagacactgcaaggcacacaggccgaggttttcttaccatctcacca
aacactatcgtcacatttgctgatgtcgtggttccaagcaccgcgaactatgaactggtt
ctaagatatgagagcgccggtattttccagagcgtgcgtatagagctgacacagcagtca
ccagtgccttatgaatgcagtggacagtcattgccaggaaccactatttcacttgtgtct
gatgtacaaaccgctggagttggaggtgtccagcagtttggtgcagcctgtttgaacgca
gctggcgtttataacgtttcagtcattactggtttctcatcccttgggctgttttcatca
atccttctggactcgttggtcctactgcccgtgctcaatgacctgaatgtatacgcctca
gcgatgacctccaacctgacccgtgaggtcatgacatcctgttggatggcagccgtttcc
ctggaccgcatcgtcagggagtctggagactgtgtcatgtatgagttctccctcatggca
gaagtctacaacggagctatcgaatgttcctgtaacaatggaggtcatcttctaggtaca
cagtgtgattcctacagcggccaatgtcagtgtttggatggtgtgacatcacagtcatgt
gactactgtcaagcctattactacggttacagcatgcaggcaggctgcacggcttgtggt
tgcgacatcaacggtgctcaacggcaggcctgtgatgacctcagcgggatgtgtgaatgc
caccagaatgtgataggaattaagtgtgatgcttgcatgccagagcattatggtctgtac
acaggtactgggtgtgtcccctgcacctgttcatccaattactcattggacaatgcatgc
gctgactctgggcaatgtagctgcaagcctggtataggtggacaagactgcactgagtgc
gccgcagggttttaccagatgacaacggatggttgtacctactgtgactgcaataaagtg
ggaagtacacagtctggctgtgactctaatggaaactgcttgtgtcttgaagggactgtg
ggggataaatgtgacgtctgtgccgaaggtttctacggctttgggccctggagtgagcgc
ggatgcacccagtgctactgttcgtcacacagtacgcagtgtaccagtgcgttgtcttgg
ttcaggggtcaggtcgtcagcagctggtccctgctggactttgatgcgatagctccacgg
tggaccggtgtcaacggaaccgattacagcgtggacataaatgaagtcccaatttttgac
ttgtcgaatccaagacttatcctggagctcagcactccgagcaactccaccgatttcttc
tttgtttctcccgacatctaccacggcgacttccgcaccgcctatggacagaacctgtct
ttcaccctaagccagacgtcagaccaggacccctctgtaaatccagagggggatgtcttc
attgagggaatgtatgtagatgagttattggtcgcatccttgccgtttgtaccgtatgca
gatggcaacgagacagaatacaacttgaaactgcatgagagctactggcgtaagggcagc
ccacaaggggaccagccaaccgctgagtatgttatgcaggcgttaactggtatccagtcc
atccgtatcagagccaagtacaacacggtaccaggagagtctgtgttcttacatagtgtc
atgttggactacgccacacagggtgatagcggtatcacggaagacaatgcagactttgtg
gagaattgcacttgcccaccacaatacacaggttctttttgtgagcaatgtgccccaggt
tataggagatcatccttagctaggggtcccttctctgattgtgtaccgtgtgactgtaac
ggccatagtgatctcccatgtgacttagacaccggggtatgccagggctgtagccacaac
accggaggggatttctgccagctgtgtctggacggttaccgtggtgacgcgaccggcgga
acaccaggtgattgtcagccatgtttgtgcccagggtcaccagatagtgtcaactctttt
gctgctgtctgtgatgcggtcggggtgtgcgctaactgcacaatcggacacagcggggac
tcatgcgagacctgcatcaacgggttctacggagtaccaactgacccaatggccaatggc
gggcaatgcgtgccatgtttctgcaacctgagcccacccgagtgtgacaccatcaccgga
cagtgtcttgcctgccagggaaacaccactggacaaacgtgtgatgtttgtgactttggc
tcttggggaatgatagacaactgccaagaatgtctttgcgattccatgggtagctatgga
aactgcagtcagactaccggcgtgtgtgattgctatcctaatgtaatcggggaccagtgt
gcagagtgcgccatgaatacctggggtatcgccagcagatctggatgtaccttatgtgac
tgtcatccagtggggaccattaatcaacagacacgctgtgatttggtcacaggtcagtgt
gaatgcaagccccgggtcacaggtcaaaaatgtgaccaatgcgcacagggctactggaac
attgatcaagaatgtataccttgtgagtgcagccttgaaggcactgccccttccacctgt
aatgccttggacggtagatgtacctgtgaccttgtgaccggtcagtgcggctgtaaggtc
ccgaccatagctggacggacgtgtgatcggtgtggccgcgttgaagaaggttctttccct
aactgtgaaccttgccctgagtgcttccaaaactggcgcaaagctttccaagacatggca
gacgtgtttactcaacagcaaatgactctcgaagcactgttagcaaactacgatggcatg
actgctatggaagtagacactatgctgaacttcatcaggagaaacttaactagtgctgaa
caagccatagagctgggcaccagggaagttgttgatctggaagatgtagaggcaggctac
aggcagatttcaatggagatagcaaatttcactgctttagtggcagccatagaggccaag
cagtcggtgctgacgaccagtacaaaccaagtaagttccttcagcgggaacgtcatcgtg
ggggacaacatggtcaggaacgcagcccagctaggaggggaactatccactttggtgact
gccctgatgagccagtttcaactggcgaatggaacatggttcactatccaagaattgaat
gctgcgatcgaggcttcttatcaacacgtccagcaactcatcagggtagttgacggcctt
cttcaggatattgagcggtcggcgatggaacgccagagcgcggaagtgattctcaacgac
aactcccgtgacgctgagtatacgacgaacgcagagcggctcgctgcgattgaaatcatc
caagcagattaccctgtagcctcgaccttccaggatgtgcaggttgcccagacagtggct
cagggagctaatgttacggcagaggtaaccttggctggggttgaggccgttcagaggcag
gctagtgcccaggcttatcagagtgaagtggctaggtataatactacgaatgctgagacg
gcagggagtatggctcaatcagctgcagtgacctacaaggatgttgcgttatccaccaaa
gccaatatgaccagctcctacatccaggtcctagacacctacacagctctacaggaggcc
gagtcccgtactatcaacgccagagatattgcgtttgctgtccagggcatgacggtccga
ccctcctccgagatacaaacactcgtagagctcatcaatgctgcttcactgagtgacacg
gacgtggagaatctacggctggagtccatgaataaattgacaagggcggagcagaccaag
agaacggccggagaggcacaaatggaagcggaaacagccggagctcaggtgcagaacttg
gagtatgacctggcggaagcgaccagagtgagggaagagacttctcagagacttcaggaa
attgatggcaacatcaccgccatcactacaacagccagtcaggtccaagcacaagctcag
gaggggtacaccagtggtcagcagacgtcatcttccattatgagtatactacagggagtc
aggaatacagagcaatgtttcagtgctaagaggaaccaggctgaagatgctgctaatagg
gctggatcagccttcggtcaagcctcaacggcccaacaggtgtttgatagcatttctcag
gacgatgagaccaccgatatgctactggctgcagcgagggtacaatcctcagcagatgct
acggtcgtccagacatcatctgacaatgctaatcagctacgagatgacatcaactacgtg
cagcaaattgcagatctagatgcactcatgacccagtacatgacccaacgcacacaaatg
cagcagctgaactcttcactggaaggactggagaccagtctagatgccatcatggccaac
ctggagggcgcagagggaggcgatttaaagtgtaaaacgtag
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