Luidia clathrata (European starfish): 117303493
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Entry
117303493 CDS
T10152
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117303493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arun04121
]
117303493
Enzymes [BR:
arun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117303493
Ubiquitin system [BR:
arun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117303493
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117303493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
zf-C3HC4_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR19_1st
zf-C3HC4
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
zf-RING_2
zf-RING_UBOX
Beta-prop_DCAF4
Beta-prop_HPS5
zf-C3HC4_3
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
zf-C3HC4_4
zf-RING_5
Beta-prop_Vps41
RING_XB3-XBAT31
WD40_like
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
WD40_RFWD3
zf-RING_10
Beta-prop_SCAP
Saf4_Yju2
SAE2
Sina_RING
Uds1
SlyX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
117303493
NCBI-ProteinID:
XP_033643605
LinkDB
All DBs
Position
19:3675630..3709022
Genome browser
AA seq
648 aa
AA seq
DB search
MASTSSSSHGSSNNRQTAARQRRKRSQPAVYNYNGVHNSYEDKDNDFLCPICFDIIDEAH
MTKCGHSFCHKCIIQSLEESNRCPKCNFAIEKNDQIFPNFALNELVLKYRQKSDEKRLKL
SPPNSHISELQELITDQEKWDLTEVNLMLEVLVGKKRQLEMDSWFAQSQILKEFLEHAKI
RKQEQLDELTKQMRLLEEDVKRVEDRLSKHREAYTSMLSSYPVALNNDDAVAPSTSSNEQ
PKIKLENSSKTDGPQEGFNGSKNGGRQQWLDTTIASRRKRLHHHLEDLEHCYFSIRQSDI
SPSENRSSEQLNQFTDSLSKFTKFSSIRPLATLSYADVYNGSSIVSSIEFDKDNDFFAIA
GVTKKIKVFEYGAVVMDAVDIHYPAHEMVCNSKISCVCWSAYHKGILASSDYEGTVTLWD
AFSASKVRLFQEHEKRCWSVDFNRVDPKLIASGSDDAKVKLWSTNQERSVACLEAKANVC
CVKFNPSKMYSLAFGSADHCVHYYDLRYPKQPLNVFKGHKKAVSYTKFVNSEEIVSASTD
SQLKLWSVDKPHCTRTFRGHTNDKNFVGLAANDDYIACGSENNSLYLYYKGLSKQLVTFK
FDTVRSVLDKEKKEEDANEFVSAVAWRTGSNVLVAANSQGTIKVLELV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggctagcaccagcagtagcagtcatggcagcagtaacaaccgacagacggccgcaaga
cagcgacgaaaaagatcgcagcctgctgtctacaattacaacggagtccataattcgtac
gaggataaagacaatgattttctgtgtcctatctgttttgacataatagatgaagcccat
atgaccaaatgtggacacagcttctgtcacaagtgcattattcaaagtctagaggagagc
aacagatgtcccaagtgtaacttcgctatcgagaagaacgaccagatattcccaaacttt
gcattaaatgaattagttttaaagtatcgacaaaagtccgatgagaaacggttgaaactc
tcaccaccaaatagtcatataagcgaattgcaggaacttataacagatcaagagaaatgg
gacctgaccgaagtcaacctgatgctggaagtcctagtcggcaagaaaaggcagctggaa
atggacagctggtttgcacagagccagatcttgaaggagtttttagaacatgcaaaaata
agaaaacaggagcaattagatgaactgaccaagcagatgaggttattagaagaagatgtg
aagagagtggaggaccgactaagtaaacaccgcgaggcctacacatctatgctctcgagt
tatcctgtcgctctgaacaatgacgatgcagtagcaccatctacaagtagtaatgaacaa
ccaaaaatcaaactagaaaattcttccaagaccgatggccctcaggagggcttcaatggc
agtaaaaacggtggtagacagcagtggttagacactacgatagcatctaggaggaagcgt
cttcatcatcatcttgaagatctagagcactgctacttcagtattagacagagtgatata
tcacccagtgaaaaccgatccagtgagcagctcaaccagtttaccgatagcctgtctaag
tttactaagttcagttcaattcgtccattagccacattaagctatgcagatgtctacaat
ggttctagtatagtctcaagtattgaattcgacaaggacaacgatttctttgcaatagcc
ggcgtgaccaagaagatcaaggtgtttgagtacggtgctgtggtgatggacgctgtagat
attcactatcctgcccatgagatggtctgcaactcaaagatcagttgtgtttgttggagt
gcgtatcataaaggaatactagcaagtagtgattacgaaggaaccgtcacactatgggat
gcattctcagcgtcaaaggtccgattatttcaggagcatgagaagagatgctggagtgtt
gactttaacagggtagacccaaaactcattgcgtctggttccgatgatgcaaaagtgaaa
ctttggtctacgaaccaggaacgctccgtggcatgtctagaggcgaaagccaatgtctgc
tgcgtcaaattcaacccctccaaaatgtactccttagccttcggctcagcggatcactgc
gtccactactacgacctgaggtaccctaagcaacccctcaatgtattcaagggacacaag
aaggccgtgtcttacaccaagtttgtcaactcggaggagattgtgtcggcgtctacagat
agtcagctcaagctgtggtcagtggacaaaccccactgtacacgcacattccgtggtcac
acaaacgataagaactttgtagggttagctgccaacgatgactacatagcctgcggcagt
gagaataactccctctatctgtactataaaggactatccaagcagttagtcacattcaag
tttgacacagtcaggagtgtactggacaaagagaagaaggaagaagatgctaatgagttt
gtcagcgctgttgcttggagaacgggttccaacgtcctggtagcagcaaacagccagggt
acaataaaggttctggagctagtatga
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