Luidia clathrata (European starfish): 117303498
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Entry
117303498 CDS
T10152
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117303498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arun03041
]
117303498
Spliceosome [BR:
arun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117303498
Complex C
U4/U6.U5 tri-SnRNP related factors
117303498
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
117303498
NCBI-ProteinID:
XP_033643613
LinkDB
All DBs
Position
19:complement(4165006..4172029)
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AA seq
382 aa
AA seq
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MPQKSNTLPTWGNEASMNLNPLILTNIQSSPYFKNELFKLKTYHEVVDEIYYRVAHLEPW
ERGSRQTSGQIGMCGGVRGVGAGGIVSSAYCLLYKLYTLKLTRKQLNGLLSHSDSPYIRG
LGFMYVRYSQPPADLWEWLEPYLEDEEEIDAKAGSGCTMTIGEMARSFLTKLEWFSTLFP
RIPVPIMKDLELKLSEWKEGFLERQREKQIEAGGVEEEEEEPEEPMARKSRGGSRDNSRS
GSHTSNRSRDHRRSRSKERQHSHSKNNDRRRRSRSREKRPRSRSPERRKRRSQDRSRDQR
RSRSRDRRREREGDDFSRALQRERERQQKERREPRSRSRERRHSRERDRKSHRDRRRSRS
TERKKSHSRDRERSRSRSQGRR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaagagtaacaccctgcccacatggggcaacgaggcgtccatgaacctcaac
ccgcttatcttaaccaacatacagtcctcgccgtacttcaagaatgaactcttcaagctc
aagacgtaccacgaggttgtggatgagatctactacagggttgcccatttggaaccctgg
gagagaggcagtcgacagacatctgggcagattggcatgtgtggaggagtccgtggtgtt
ggtgcaggaggcatcgtctcatctgcctactgccttctttacaagttgtacacgttgaag
ctgacacggaaacagctgaacggtctcttgtctcactctgactctccatacatcagaggt
cttggtttcatgtacgtcaggtacagtcaaccaccagctgatttatgggaatggctggag
ccttatctagaagacgaggaggagattgacgctaaggctgggtctggttgcaccatgacc
atcggagagatggcacgcagcttccttaccaagttagagtggttctctaccctctttcct
agaatccctgtcccaataatgaaggaccttgagttgaagttgtcagagtggaaggagggg
ttcctggagaggcaacgtgagaaacaaattgaggcaggaggcgtagaagaagaagaagaa
gagcctgaagaaccaatggctcgaaagagcaggggcggatccagagacaactcccgaagt
ggaagccacaccagcaatcgcagtcgagaccatcgcaggagtcggagcaaagagcgccag
cacagccacagtaaaaacaacgaccgccggagacgcagtaggagtcgcgagaagcgccct
cgcagtcgcagcccggaaaggcgtaaaaggagaagtcaggacagaagtcgcgatcaacga
cgcagccggagccgcgatagacgccgggaaagagaaggggacgacttttcacgtgccttg
cagcgggagcgagaaagacagcagaaggagcgacgagagccaaggagtcgaagccgagag
agacggcatagtcgagagcgagatagaaagagccaccgagataggagacgtagccgatca
acagagcgaaagaaatcacattccagggatcgagagcgaagtcggagtcgaagtcagggt
cggaggtga
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