Luidia clathrata (European starfish): 117304088
Help
Entry
117304088 CDS
T10152
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117304088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arun03041
]
117304088
Spliceosome [BR:
arun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
117304088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
117304088
NCBI-ProteinID:
XP_033644480
LinkDB
All DBs
Position
20:4099682..4117134
Genome browser
AA seq
513 aa
AA seq
DB search
MADTKTGVKRKLVDVPDDFSDSDDEIAPVKDPKVDKSRSCPYLDTINRRVLDFDFEKLCS
VSLSHLNVYACLVCAKYFQGRGRKSHAYTHSVQINHHVFLNLHTLKFYCLPDNYEIIDSS
LEDITYVLRPTFTKDDIENLDSNTKLSRAYDKTTYLPGIVGLNNIKANDYCNVLLHALAH
IVPLRNYFLEEKNYINIKLPPGDIMCLLSQRFGELMRKMWNPRNFKAHVSPHEMLQAIVL
CSKKRFQITKQGDPVEILSWFLNALHASLGGTRKAKSSIVYGTFQGRMKVFTKKIIPMDT
PEKDKEELLKTEEYKETVTETPFLYLTLDIPQAPLFKDELEQNIIPQIPLSSLMTKFDGV
SEKEYKTYKDSTIKRFQLTRLPPYLILCMKRFNKNLFFIEKNRTIVNFPIKNMDFTEYLS
KDPEVQKRNPSASYDLIANIVQDGEPGPGKGTYRAHVLHKSTGKWHEIQDLHVADILPQM
ITLSEAYIQIWERKDRKAEEGDEKPKTQRQPEN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccaaaacgggagtgaaacggaaactcgttgatgttccagacgatttctcc
gatagtgacgatgaaattgctccagtgaaggatcccaaagttgataagagcagaagctgc
ccttacctcgatacaatcaataggcgagtcttagattttgattttgagaaattgtgctca
gtctccctgtcccatctgaatgtgtatgcttgccttgtatgtgccaagtactttcaagga
cgagggaggaagtcccatgcctacacccacagtgttcagatcaaccatcatgtcttcctt
aacctacataccctcaagttctactgcctgccagataactatgaaattattgactcatca
cttgaagatattacgtatgtcctgagacccacctttacgaaggatgacattgagaatctt
gacagtaacaccaagttgtctagagcttatgacaagacaacgtatcttccgggcattgta
ggtctcaacaacatcaaagcaaatgactactgcaatgttttgctccatgccctcgcacac
attgtccccctccggaactactttcttgaagagaagaactacattaacatcaagctccca
cctggtgacatcatgtgcctgctgtcgcagcgtttcggggagctcatgcgtaagatgtgg
aatccacggaacttcaaggcccacgttagtccacacgagatgctgcaggccatcgtcttg
tgcagtaaaaagagattccagatcaccaaacagggtgatccagttgagatcctctcctgg
ttcctcaatgcccttcatgcttcgctcggcggaacaaggaaagccaagagtagcatcgtc
tacggtacattccagggtagaatgaaagtattcacaaagaaaatcatccccatggataca
ccggagaaagacaaagaagaactgctcaaaacagaagaatataaagagaccgtgacagag
accccctttttgtacctaacgttggacattcctcaagcgccactgttcaaggatgagctt
gagcagaacatcatcccacagattccattatcttcactcatgacaaagtttgatggagtt
tctgaaaaggagtacaagacctacaaagactcgaccatcaagagatttcagctgactcgt
ctacctccttacctcattttgtgcatgaaacgattcaacaaaaacctcttctttattgag
aagaatcggaccattgttaacttccctattaagaacatggatttcaccgagtacctatcc
aaggatcctgaggttcagaagagaaatccttcagccagctacgatctgatcgccaacatc
gtacaagatggggaaccaggaccaggaaaaggcacatacagggctcatgtattacacaaa
agtactggtaaatggcacgagattcaagatcttcatgtagctgacattctaccccagatg
atcacgttatcagaagcttatatacagatttgggagaggaaagatagaaaagctgaagaa
ggagatgagaaaccaaagacacaaagacaaccagaaaattga
DBGET
integrated database retrieval system
