Luidia clathrata (European starfish): 117304333
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Entry
117304333 CDS
T10152
Name
(RefSeq) histone deacetylase 6-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arun01009
]
117304333
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117304333
04131 Membrane trafficking [BR:
arun04131
]
117304333
03036 Chromosome and associated proteins [BR:
arun03036
]
117304333
Enzymes [BR:
arun01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117304333
Protein phosphatases and associated proteins [BR:
arun01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117304333
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117304333
Membrane trafficking [BR:
arun04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117304333
Chromosome and associated proteins [BR:
arun03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
117304333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
117304333
NCBI-ProteinID:
XP_033644616
LinkDB
All DBs
Position
2:complement(10132746..10195318)
Genome browser
AA seq
1107 aa
AA seq
DB search
METPAVEPAGQDAQSKGEASPQQTSSQSQQDEHPPQGASGHQPTAEDKNCGKRVTSGKKG
SKMGTRSKSGIQAMKQKGREAVKRSGNEDDLAAQIAGMTISDAPKAIPQGTGLVYDERLT
QHACPFNSNHFQSENGERILQCHKRLQHYNLLERCTRVPVRLASDEEVLSKHSLEYLESV
KSTRTMSEIELKDWANQVSDIFVNNHSYECAALAVGGMLDLTEKVVKGELRNGFAIVRPP
GHHATRSKADGYSLFNTVAITAQTAKHQWNCERVLIVDWDVHHGQGVQYHFEDDPSVLYF
SIHRYEHQEFWPCLKDSDCDAVGKGKGVGFNINVPWNEIGLGDSEYLAAFQQILLPVAYE
FNPHLVLVCCGFDAATGDPKGEMQVTPAGFAHLTHALMGLADGKVVLALEGGYNLKVIGE
CAAMCTQTLLGDPCPVLPKTTEPSKSAVESIFNVIKNIRPYWSSLKYQVDPECLQSEVVS
SSSLNQPLLRDDQSKTTKGPEPEEIDKLIDKLIAEIDLTVPKNRTCLVYDEEMMRHKTAF
QHPERPDRIARIFSKHKELGLVQRCLRVESRRATKNELHQCHSAKHIERLEAMQSNTPRE
LNKMQDDFKSIYLHQSSFDCARLAAGSTLNVVDTVLSGQARNGVAIVRPPGHHAESHTAM
GFCFFNTVALAARYAQQKHGLNRVLILDWDVHHGNGTQHMFENDPSVLYVSLHRYENGLF
FPSSPDAEPNKAGEGAGEGFNVNIGWNVDVMGDAEYLAAFMQVVMPIAYEFCPDLVLVSA
GFDAAYGDPLGGYKVTPEGYAHMTHMLCSLAKGKVIVVLEGGYNLNSISLSMAMCTRILL
GDPCPAIDSGLPSHNAVKSILETLHVHRKYWKSLKYQVNLPSLPPWEPVEVTSTESETKC
LSSKLSEDVGAGDYEVSTTLGTSPSDATPKQSATEESPVTDPSPVSTVGEPVTGSDESQN
LETLGAAASGAEAGAMAAGGKPATIVELFGPEAQLHAVVPLTWCPHLDSHVLPNPPSMPI
SSSDPCIECQDTSENWVCLHCYKVLCGRYVNEHMLFHSIATSHLMVLSYADLSVWCYGCD
SYVHNEIVFPAKRAAHISKFGCDVPGM
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggagacaccggctgttgaaccagctggacaggatgcacaatccaaaggagaagcatca
cctcagcagacctcaagtcagtctcaacaagatgaacatccaccacaaggtgcatctggc
caccaaccaacagctgaggataagaactgtgggaagagagttacttctgggaagaaggga
agcaaaatgggtactcgctccaagtcagggattcaggccatgaagcagaaaggcagagag
gctgttaaacgaagcggaaatgaagacgatctcgctgcacagattgctggaatgacaatt
tcagatgcaccaaaggctattccacaagggactggcctggtgtatgatgagcgtttaacc
caacatgcatgcccctttaatagtaatcattttcaaagtgaaaatggcgagcgaatttta
caatgtcacaaacgacttcaacactacaaccttcttgaaaggtgcactagagtgccagtc
cgtttagcttctgatgaggaagttctttcaaagcacagtttggaatacttggagagtgtg
aaatctactcggaccatgtcagagattgagctgaaagattgggccaaccaggtttccgac
atctttgtcaacaatcattcgtatgaatgtgcggcgctagcagttggtggaatgctggat
ctgacagaaaaagtggtcaaaggagagcttcgcaatggttttgctattgttcggccgcct
ggtcatcacgctacaaggagtaaagccgatgggtatagtctttttaacactgtggctatt
acagctcagactgcaaagcatcaatggaactgtgaaagggtactgattgttgactgggat
gttcaccatggacagggagtgcagtaccactttgaagatgacccaagtgtattatacttt
tccattcatcggtacgaacatcaggagttctggccttgtctaaaagattccgactgtgat
gccgttggaaaggggaaaggtgttggcttcaacatcaatgttccctggaatgagattgga
ttaggagacagtgagtacctggctgcctttcagcagatactcctgccagtggcatatgag
ttcaatccacatttggttcttgtctgctgtgggtttgatgcagcaactggggacccaaag
ggtgaaatgcaagtgaccccagcaggatttgctcatctcacacatgctctgatggggcta
gctgatgggaaagtggttttagcccttgagggtggatacaatttgaaggtgattggtgag
tgtgctgctatgtgtacacagacattgctgggggatccctgcccagtgcttccaaaaacc
actgaaccaagcaagagtgctgtcgaatccatttttaatgtgattaaaaatatcagacct
tattggagtagcttgaagtaccaagttgacccagagtgtttacaaagtgaggttgtgtca
agttccagtttaaaccagcccctcctccgagatgaccaaagtaaaactaccaagggtcca
gagcctgaagagattgacaagttgattgacaagttgatagcggaaatagacttgaccgtc
cccaaaaacaggacctgtctcgtatatgatgaggaaatgatgaggcataagacagctttc
caacacccggagagaccagacagaatagccaggattttctcaaaacacaaagaattgggc
cttgtccaaaggtgtctaagagttgagtcaagacgagcaactaaaaatgaacttcaccaa
tgccatagtgctaagcacatagagagactagaagcgatgcagtcaaacacacctcgagaa
ctcaacaagatgcaagatgacttcaaatctatctacctacaccagagttcttttgactgt
gcacgtcttgccgctggttccacgctgaatgttgtcgacactgttctctctggccaggca
agaaatggagtggccattgttcggccgcctggtcatcatgcagaatctcacactgcgatg
ggattttgtttcttcaacacagtagctttagcagcacgctacgcccagcaaaagcatgga
cttaatagggtgttgatcctcgactgggacgtccaccatggtaatggtacccagcacatg
tttgaaaacgaccccagcgttctgtatgtgtctttgcatcgctatgagaatggtttgttc
ttccctagttctccggatgccgaaccaaataaggctggtgagggagctggtgaggggttt
aacgtcaatattggatggaatgtggatgtaatgggagatgcagaatacctagcagccttt
atgcaagttgtcatgccgatagcatatgagttctgtcctgatttggtgttggtgtctgct
ggtttcgatgcggcatatggtgatccactgggaggatacaaggtaacaccagagggctat
gcccatatgacacacatgctgtgtagtctcgcaaaaggaaaggtgatcgttgttctagag
ggtggatacaatctgaactctatatccctatccatggctatgtgtacaaggatccttctt
ggtgatccctgcccggccatcgactcagggctccctagtcacaatgctgtcaaatctatc
ttggaaacccttcatgttcatcggaaatactggaaaagcctaaaatatcaagttaaccta
ccaagtctacctccctgggaaccagttgaagtgacgagcacagaatctgagaccaagtgt
ctatcatccaaactatcagaagacgtaggagctggtgattatgaggtatccaccacttta
ggaacgtctccgagtgatgctactcccaagcagagtgctaccgaagaatctcccgtcacg
gacccttccccagtgtccaccgtgggtgaacctgtcacaggaagtgatgaaagccagaat
cttgagacattaggcgcagccgccagtggagcggaggcgggggcaatggccgcgggtggg
aagccggccacaatcgtagaacttttcggaccggaggcacagttacatgctgtagtgccc
ttaacctggtgcccgcacctagatagtcatgtcttaccaaacccaccttcaatgcctata
agttccagcgacccgtgtatagaatgccaggataccagcgaaaattgggtatgtctgcac
tgctacaaggtcctgtgtggtcgttatgtcaacgagcatatgctcttccacagcatagct
acatcgcaccttatggtactgagctatgcagatttatcagtgtggtgctacggatgcgat
tcctatgtgcacaacgagattgtttttccagcgaagagggcagcacacatcagtaaattt
ggctgcgatgtccctggcatgtga
DBGET
integrated database retrieval system
