Luidia clathrata (European starfish): 117304562
Help
Entry
117304562 CDS
T10152
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117304562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117304562
03012 Translation factors [BR:
arun03012
]
117304562
Enzymes [BR:
arun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117304562
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117304562
Translation factors [BR:
arun03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117304562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
nSTAND3
AAA_22
AAA_19
ATPase
AAA_16
NACHT
TCTP
Tyr-DNA_phospho
NPHP3_N
ABC_tran
TsaE
NB-ARC
RsgA_GTPase
PhoH
Myosin_head
AAA_23
Motif
Other DBs
NCBI-GeneID:
117304562
NCBI-ProteinID:
XP_033644979
LinkDB
All DBs
Position
21:complement(1330411..1345204)
Genome browser
AA seq
967 aa
AA seq
DB search
MSYRGRRGRYNNRRGGSYHGNRRPRWEDEEEGGASGWDGNSGGRGRGQGRGGGGGRPPSG
LKGRDLGMWYAARSQAKKRDDEIKNRSVVDMRPSHEKHIRTLLDDVKHEDTEDKLEFKDA
KKLNPLEESSRSFYRHPLTPDEALDSRLQQQHVSKQTDNERYKNMQTFRKKLPSYKMRQE
LLQLIHDNQVVVISGETGCGKTTQVPQFILDHHLENGTGSMCRVICTQPRRISAITVAER
VASERAEPCGNGSSTGYQIRLEARLPRQQGCILYCTNGILLKWLDSDPLLQSVSHVVLDE
VHERDIMSDFLLVILKDVLPKRPKLKIILMSATLNAELFSEYFGGCPMTNIPGFTFPVVE
FWLEDVLTMTRYQPQEKRDRREPKWVKFKRGKRYRQEELKKEEEFQEKFSEYIKEIRPSY
PDEVVYYLENMDHEAMDLELVSSLVRFISLNKPDGAVLVFLPGWEQISKLNDLLTQQQMF
KSDRFRIIPLHSMMPTASQRQVFERPPAGVRKIIIATNIAETSITIEDVVYVVDLGRVKE
RNFDVANNLSTLKPEWVSTAAAHQRRGRAGRVQPGECYHLYSQLQSSLLIDYQLPEMLRT
PLDELCLQIKSLKLGRVHDFIQKALQHPDPRAVNLALESLTRMNALDENEQLTPLGYHLA
RLPVAPSIGRMILFGAMFCCLDPVLTIAASLSFKDPFVIPLGKEKMADARRKLLSEETFS
DHLMLVNAFDGWEDAREHGRQAENDFCWRNFMAATTLKMLDNMKTQFCELLASLGFVQHK
SCKQPAANRNSGNRELIKAVLCSGLYPNVAQVRGNSFNRRAGKHRPAKIMTPQDGQVKIH
PKSVNCDESQFPSNWILYHLKMKSTSVFLHDTSAVEPYPLLFFGGKIGVTTEDGHETITV
DDHIKFHAPATIANLVKDLRQELDRLLRQKINKPGMIQWGQDCKEGRIMQAIIDLITTEE
EHDQADW
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgagttacaggggacgccgcggccgatacaacaaccgcagaggaggctcctaccatggc
aaccgccgacctagatgggaagacgaagaagaaggaggagctagtggatgggatgggaac
agcggagggagggggcggggacaaggaagagggggaggaggaggaaggccccctagtggc
cttaagggtcgggatctcggcatgtggtatgcggcacgaagtcaagccaagaaacgagat
gacgaaattaaaaatagatcagttgttgacatgagacccagccatgagaagcacatccgt
accttattggatgacgtcaaacatgaagatacagaggacaaactggaattcaaagatgca
aaaaagttgaatccactagaggagagttctcgttctttctaccgtcatcctctgactccg
gatgaagcattagactccaggctgcagcagcagcatgtttccaaacagactgataacgaa
cgctacaagaacatgcagacattccgcaagaagctcccatcatataaaatgagacaggag
cttcttcagctgatacatgataaccaggtagtagtgataagtggtgagactgggtgtggt
aagacgacacaagtccctcaattcatcctagaccaccacttggagaatgggactggatca
atgtgtcgtgtaatctgcacgcagccacgcaggatatctgctataacagtagcagagagg
gtggcgtctgagagagcagagccatgtggcaatggaagtagcacagggtaccagattaga
ctggaggccagactaccaagacaacagggttgtattctctactgtacaaatggaatacta
ctcaagtggctggactcagacccacttctgcaaagtgtgagccatgtggtccttgatgag
gtgcatgagcgagacatcatgtcggatttccttctcgtcattctcaaagacgtcctgcca
aaaagaccgaaactgaaaatcatcctcatgagtgcgacgttgaatgccgagttattctca
gagtattttggcggctgtccgatgaccaacatccctggctttacgttccctgtggttgag
ttctggctggaagacgtactcaccatgactaggtaccagccacaagagaaacgagatcga
cgcgagcccaagtgggtgaagttcaaacgcggaaaacgataccgtcaagaagaattgaag
aaagaggaagagtttcaggagaagttcagcgagtatatcaaggagataagaccgagttac
cctgacgaggttgtttattaccttgagaacatggaccatgaagcgatggacttggaactt
gtgtcttcactcgtcaggtttatcagtctcaataaaccggacggagctgtgttggtattc
ttaccaggatgggagcagatctccaagttgaatgaccttttgacccagcagcagatgttt
aagagtgatagattccgcatcatcccactacactctatgatgccgaccgctagccaaaga
caggtgtttgagcgacctccagcgggcgtgcgtaagatcatcatcgcaaccaacatagcg
gagacgagcatcaccatcgaggacgtcgtgtacgtggtcgacctcggcagggtcaaggag
agaaactttgacgtggcaaacaacctgagcacactgaaaccagaatgggttagcacggca
gcggctcaccagagaaggggtagagctggaagagtccaacccggtgaatgttaccacctg
tacagtcagttgcagtcctccttgctgatagactatcagttgccggagatgttaagaaca
ccattggatgaactctgtctacaaatcaagtccttgaagcttggacgggttcatgacttc
atacagaaggcccttcagcatccagacccacgtgcagtaaacctagccttggagagcctc
accagaatgaatgccctagatgagaacgagcaactcacccctctcggttaccaccttgcc
cggctccctgtagcgccctctatcggcaggatgattctattcggtgcgatgttctgctgt
ctggaccccgtattgaccatcgcagctagcctgagcttcaaagacccgtttgtcattcca
ttgggcaaagagaaaatggctgacgctcggaggaagctactatctgaagaaacattcagt
gaccatctaatgctggtcaatgcattcgacggctgggaagatgcgagagagcatggtcgc
caagcagagaatgatttctgctggagaaacttcatggcggctacaacattaaagatgctt
gataacatgaagacacagttctgtgagctgctggcatcgcttggttttgttcaacacaag
tcctgcaagcagcctgctgcaaataggaactcagggaatcgggagctgatcaaagccgtc
ctatgctctgggctgtacccaaatgtggctcaggtcagggggaactcattcaacagacga
gccggaaaacacaggccagccaagattatgactccacaagacggccaagtgaagatccat
cccaagtcagtcaactgcgacgagagtcaattcccgtcaaactggatcctctaccacctc
aagatgaaatcaaccagtgtattcctacatgataccagtgctgtagagccctaccccttg
ttgtttttcggcgggaagatcggagtcacaacggaggacggccatgaaacgatcaccgtc
gatgatcacatcaagttccatgcaccagcaacaatcgcaaatcttgtcaaggatcttcgt
caagagcttgacagactgctgaggcagaagatcaacaagcctggaatgatccagtggggt
caggattgtaaggaaggacgcattatgcaggctatcatcgacctgatcacaacagaagaa
gagcatgatcaagctgactggtag
DBGET
integrated database retrieval system
