Luidia clathrata (European starfish): 117304651
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Entry
117304651 CDS
T10152
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2-like isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arun03009
]
117304651
Ribosome biogenesis [BR:
arun03009
]
Eukaryotic type
90S particles
Other 90S particles
117304651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IP5PC_F
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_WDR75_2nd
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD_LRWD1
WD40_like
Beta-prop_Vps41
Rrn6_HB
Motif
Other DBs
NCBI-GeneID:
117304651
NCBI-ProteinID:
XP_033645104
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All DBs
Position
2:25633904..25657156
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AA seq
490 aa
AA seq
DB search
MSFFIRGSATKKKSVGKKDSSGKSKRDVSTAAINKLRKKKAKLTEEIVSDSSDDEIDTPT
NKRKVVPSSSESESEEETAQEKRLRLTKQYLAQLADEEKDNEDARDIDKDAISHRLKEDV
LELSGKLQRKVCQEYDFEATPEMTVLRGHNLSITCLVISPDNKYIFSASKECCIIKWNIE
TRLKEYIIPGGKKGTEDTHKGHTTHILALAISSDGQFLASGCRSKLIHIWNPSNGELLHT
FRGHRDTVSGLTFRKGTHTLYSASHDRTAKVWNVDEMAYVETLFGHQDSITAIDSLSRER
AITSGGRDNSVRVWKVIEESQLVYNTQGGSVDCVKLINEEHFISGSDDGSISLWSVLKKK
PAAVVKSAHSPKYDHISSDVSQKMETVISHEENWISSVAALQSSDLVASAGSKDSKIRLW
QCSEGFRSLIPVAGIEVAGFVNAMQFTSDGSLLVAGVGQEHRLGRWWKLKQAKNNIVIIG
LKKKATVKSV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcattctttataagaggctcagctacaaagaagaagtctgtcggcaaaaaggattcc
tcaggtaaatctaaacgagatgtgagtactgctgcaattaacaaactcaggaagaagaaa
gccaagttgactgaagagattgttagtgattcatctgatgatgaaattgataccccaacc
aataagcgaaaggttgtcccatcctcatctgaatccgaatctgaagaggaaactgcacag
gaaaagagacttcgtctaaccaagcagtatttagcacagcttgcagatgaagagaaagat
aatgaagacgccagagatattgacaaagacgccatatcacacagacttaaagaagatgtg
ctcgaactgagtggaaaactacagaggaaagtttgccaggaatatgactttgaagcaaca
cctgagatgactgtactgagaggtcacaatttgtcaattacttgccttgtcatatcccct
gacaacaagtacatatttagtgcttctaaagaatgctgcattatcaaatggaatattgaa
acaaggctgaaggagtacatcattccaggtgggaagaaaggtacagaagacacacataaa
ggtcacacaacccacatcctggcactcgcaatctcaagtgatggtcagttcttagcatca
gggtgtaggagtaaactcatacacatatggaatcccagcaatggggaactgttgcacacg
ttcaggggccacagggatactgtgtcgggtttaacatttaggaaaggaacacacacgtta
tacagtgcttcacatgatcgaactgccaaagtatggaatgtcgatgaaatggcctatgtg
gagaccttatttggtcatcaggacagcatcacggccatcgatagtttatctcgagaaaga
gcaatcacgtcaggagggcgggataattcagtacgagtatggaaagttattgaggagtca
caactggtgtataatactcaagggggttctgtggactgtgtcaagttaataaatgaggag
catttcatcagtggaagtgacgatggttcaatttccttatggagtgtcttaaagaagaaa
ccagcggctgttgtaaaaagtgctcactctccaaagtatgaccatatcagtagcgatgtc
tcacaaaagatggaaactgttatctctcatgaggagaactggatctcatcggtggcggca
ttacaaagctccgatctggtggcttctgcaggttctaaagattccaagattcgtttgtgg
cagtgttctgaaggattccgatctctcattcccgttgctggcattgaagttgctggattt
gtgaatgcaatgcagtttaccagtgacgggagcctgttagtggcaggagtgggacaggag
caccgtttgggaagatggtggaaactcaagcaagccaagaacaatattgtcatcattgga
cttaagaagaaagctaccgtaaaatctgtctag
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