Luidia clathrata (European starfish): 117304674
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Entry
117304674 CDS
T10152
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117304674
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
arun01002
]
117304674
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arun03021
]
117304674
03036 Chromosome and associated proteins [BR:
arun03036
]
117304674
Peptidases and inhibitors [BR:
arun01002
]
Metallo peptidases
Family M1
117304674
Transcription machinery [BR:
arun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117304674
Coactivators
SAGA/TFTC/STAGA complex
117304674
Chromosome and associated proteins [BR:
arun03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117304674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
117304674
NCBI-ProteinID:
XP_033645134
LinkDB
All DBs
Position
21:11599073..11623470
Genome browser
AA seq
1208 aa
AA seq
DB search
MSKIFKKGEKTFETPRPFRLNHQILCITGVNFQRKSIIGYVELHLLPLRSGVNRIFLNSK
QCRIYRICINEIWEASFMYSDPSLSICQNETKQRNLDFFSGCHSTAMNSVDPDQANGELL
IKIPQDAMHLVNDQKMLQVSIEFSLERPQGGIHFVVPDTEGSMAERAAHMFTYSHDNSSR
AWFPCIDTYSEPCTWKLEFTVDKAMTAVASGDLVETVYTLDMRKKTFHYMLNVPTSAPNI
AFAVGPYEILVDPVMPEVTHFCLPQLKPLLEHSTAFLHEAFDYFEECLGTRYPYSNYKQV
FVDEAYRDYSSFATLSILSTNLLHSSRIIDQTFMTRRFMAQSLAEQYFGCFVSSQSWSDL
WLPKGISKYLTGLLLKRMFGVNEYRYHIHKELTSLCQYEQQIGGVILHSNPPTAQTTSTD
DTEPGSTKPTPKSGESGAYFSIKNPHTVSWRYHEMMRVKAHLVMRLIELRIGQDLLLQVF
NKLLSLATSAATLKFITNSWGNMLLSTSGFLKSLSTVSGKDLSLFLDQWVYQGGIVQFHG
SFNFNRKRNIVELELRQDPGRKGILKYVGPLKVTVQELDGSFEHTLQVEDNVTKGDITCH
SKSRRHKKKKIPLMNGEEVDMDLSTMDADSPVLWIRVDTKMTLLRQVIFKQPDFQWHYQL
RYERDIIAQIEAIENLEKFPSTSTVNVLSESIENRQCFHKVRMVAAHSLAKISNELVASY
MGHTAIIAMFKKLFGSYSCADIVRQNNFNSFMDYFLQKTLPVALATIRNGHSLCPRESLD
FLVDLIKYNDNTKNKFSDNYYRASLITALTRTITPAVAMVSTSVENLTPETKMVLEEVTR
CLNLEKLLPCYHHRVTISCLQAIRTLQKNGHLPSDPTLFQTYAQYSHFVEIRMAALESLV
DYVKVEANADIFSWLLDIVEQDPMPSVRHRLFQMLIDNPPFKHREESPLNNEALVERMWT
LMNCGTSHDARLRCDAVDFYHSLYGRSRPSCLPIPEFGLVLNLKEKRTMLNPSIVIPDED
SIESDSQSLNDSEEMKDESQNSGSESNVDRKRKTISPLPSSSQQRGGSKSDEEVEEDHAL
KRKKSILETQSSVMSSESSSDDDEAPSMEKTDQATSIHRQIKTEPSTPTATSVRVKEEMM
PNPSSLPGLSKPMEFKYRIPKLNRSSSDKSYDHSGQSTSGSSLNKSHKKKKKKDKHRHKK
RHDRDVHD
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcttcaagaaaggagagaaaacgttcgagacacctcgtccatttagattg
aatcatcagatattgtgcataaccggagtcaactttcagaggaagtcaatcatcggctat
gttgaactacatctccttccccttaggtcaggggtcaatcggatcttcctcaacagcaaa
cagtgcagaatctatcgtatctgcattaacgagatatgggaggcgtcattcatgtacagt
gatccgtcactctccatctgccaaaatgaaacgaaacagcgtaatcttgatttcttttct
ggctgccacagtacagccatgaactctgttgaccccgatcaggccaatggagagttattg
attaagattcctcaagacgccatgcatcttgtcaatgatcagaagatgttacaagtcagc
atagagttttccttggagagaccccagggtggaattcactttgtcgtccctgacactgaa
ggatccatggcagagagagctgctcatatgttcacctacagtcacgacaactcatcccgg
gcgtggtttccatgcatcgatacctactcagaaccatgtacatggaagctagagttcacc
gtcgataaagccatgacggccgtagcatcgggggatcttgtggagactgtgtacactcta
gacatgagaaagaaaacctttcattatatgctcaatgtgccgacctctgcgccaaacatt
gcattcgctgtggggccgtatgagattttagttgatccagtcatgccagaggtgactcat
ttctgtctacctcagctgaagcctctccttgaacactccacagcatttctacatgaggca
tttgattactttgaggagtgtctgggtaccagatatccctacagtaattacaaacaggtg
tttgtagatgaagcatatagagactactcctcattcgctacactctctattctcagcacc
aatctacttcactcgtcccgcatcatcgatcagacattcatgacccgacgcttcatggcg
cagtccctagccgagcagtactttggttgtttcgtcagctcacagagctggtctgattta
tggttgcctaaaggtatctccaagtatctgacaggtctactgctgaagaggatgtttggg
gtcaacgagtatcgatatcatatacacaaggagttaacctcactctgtcagtacgagcaa
cagataggaggtgtcatccttcattccaatcctccaacagcccaaaccaccagcaccgat
gacactgagccaggttctaccaaacccacccctaagtccggggagagcggggcgtatttc
tccatcaagaaccctcacacggtgtcctggaggtatcatgagatgatgagggttaaggcg
catctcgtcatgaggctgattgagctcaggatcggccaagatttgcttcttcaggtgttc
aacaagttactgtctctggctacttcagctgcaactcttaaattcatcactaactcctgg
ggtaacatgctcctgtcgacaagcgggttcttgaagtcattatcaactgtctccggtaag
gatctttcgttgttcttggaccaatgggtgtaccaaggagggattgttcaattccatggc
agcttcaacttcaacagaaaacgaaacattgtggaactggagttgagacaagaccctggg
cggaaaggaattctgaaatatgtgggaccgctgaaggtaacagttcaagagttagacgga
tcctttgagcatactctacaagttgaagataacgtaacgaaaggagacatcacttgtcat
tcaaaaagcagaaggcacaagaagaagaagattccattgatgaatggtgaggaagtggat
atggatcttagtaccatggatgctgactcgccagtattatggatccgtgtggataccaag
atgacactgttacgtcaagttatcttcaaacagccggatttccagtggcattatcagctg
cgatatgagagagatattatagctcagattgaggccattgagaatcttgagaagtttccg
agtacatctacagtgaatgtcttatcagagtccattgagaacagacaatgcttccacaag
gtgcgcatggtggctgctcattcattagccaagatctctaacgagctggtagcgtcctac
atgggtcacacggctatcatcgcgatgttcaagaagctctttggctcctactcctgcgct
gatatcgtcagacaaaataacttcaatagcttcatggactacttcttacaaaagacgtta
cccgtagcacttgccacaatccgcaatggccactcactgtgtccaagggaatccctcgac
ttcctggtggacctgatcaagtacaacgacaacaccaaaaacaagttttcagataactac
taccgtgcatcactcattaccgcattgaccaggacaataactccagctgtggcaatggtc
agcacaagcgttgagaatctcactccagaaacaaagatggtccttgaggaggtgactcgt
tgtctgaatcttgagaagctcctaccctgttatcatcatcgagtcaccatcagctgcctt
caagcaatccgcaccctccagaagaacggccacctacccagtgatccaacgctgttccag
acctacgctcagtacagtcactttgtagagatcagaatggccgcgttagaatctctcgtt
gattatgtcaaagttgaagccaatgcggacatcttttcgtggcttctggacatcgttgaa
caagatcccatgccatcagtcagacatcgtttgttccagatgctcatcgataatccacca
tttaagcatagagaagaatcaccgcttaataacgaggctctggtggagagaatgtggact
ctcatgaactgtggtacgtcacacgatgccaggttgcgatgcgatgctgttgacttctac
cacagtctatacggcaggagccgtccatcttgtctgccaatacctgagtttggcttggtg
cttaatttaaaggagaaacgaaccatgctgaatccatctattgtaatccccgacgaagac
tctatagagagtgactcacaatccctgaatgacagtgaggagatgaaagatgagagtcag
aattccggttcagagagcaacgttgatcgcaaacggaagactatctctcccctcccgtca
tcctcacagcaacgaggcgggtcaaagagcgatgaagaagttgaggaagaccacgcctta
aagaggaagaaatctatactagagacgcagagtagcgtcatgtcttccgagtcttcgtct
gatgatgacgaagcgccctctatggagaaaaccgaccaggctacatcgatccacaggcag
attaagacggagcccagcacgccaacagcaacaagtgtaagagtcaaggaggagatgatg
cccaacccttcatcattaccaggtctctctaaacccatggagttcaagtatcgtatccca
aaactaaatcgcagcagttcggacaaatcttacgaccacagcggacaatcgacatctgga
agcagcttaaataaatcacacaagaagaagaagaagaaggataaacatcgacacaagaaa
cgccatgatcgggatgttcatgattag
DBGET
integrated database retrieval system
