KEGG   Luidia clathrata (European starfish): 117304858
Entry
117304858         CDS       T10152                                 
Name
(RefSeq) mRNA export factor-like
  KO
K14298  mRNA export factor
Organism
arun  Luidia clathrata (European starfish)
Pathway
arun03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:arun00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117304858
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arun03019]
    117304858
   03036 Chromosome and associated proteins [BR:arun03036]
    117304858
Messenger RNA biogenesis [BR:arun03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     117304858
Chromosome and associated proteins [BR:arun03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    117304858
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd ANAPC4_WD40 eIF2A Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SPT8 WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40
Other DBs
NCBI-GeneID: 117304858
NCBI-ProteinID: XP_033645371
LinkDB
Position
21:9093263..9107764
AA seq 374 aa
MFGATTGFGAATTGAGMFGQTAATAGGTHNPMKDFEVANPPDDSISSLAFSPGTVPTTFL
IAGSWDNNVRCWEVQNTGATVPKAQQTHQGPVLDVCWNDDGTKVFSASCDKTAKMWDLNS
NQAIQVAQHDAPIKTIHYIKAPNYSCIMTGSWDKTLKFWDTRSPNPMANIQLGERCFCAD
VVYPMAVVGLAGKKINIYRLESGPQEYKVNQDSPLKFQHRCVAIFQDSKKTNPAGYALGS
IEGRCAIQFEPVTNPKDNFTFKCHRSNGAASYSYQDIYAVNSIAFHPEHGTLATAGSNGK
FSFWDKDARTKLKTSEEMENPITACKFDAKGNIFAYAVSYDWSKGHEFYNPQKKNYIFLR
GNAMEELRPRNRKR
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgtttggtgcaacaacagggtttggtgcggccaccaccggagcgggaatgttcggccag
actgcagcgacagctgggggtacccataaccctatgaaagactttgaggtggccaatcca
ccggatgacagtattagttcacttgcgtttagcccaggaacagtgccaacaactttcctt
attgcaggatcatgggataataatgttcgttgttgggaggtgcaaaacacaggagctacg
gtacccaaggctcaacaaacacaccagggccctgtcctcgacgtctgctggaatgatgat
ggtacgaaggtgttttctgcatcttgtgacaagaccgccaagatgtgggacctaaacagc
aatcaagccatacaagttgctcagcacgatgcaccgattaaaaccatccattacatcaaa
gctcccaattactcgtgtatcatgacaggtagctgggataaaacactcaagttttgggac
acacggtcacccaacccgatggccaatatacaactcggtgaacgctgcttctgtgctgat
gtggtttatccaatggctgtggtcggactcgcaggcaagaagatcaatatttacagattg
gagagtgggcctcaagaatacaaagttaaccaagactcgcctctcaaattccagcatcgt
tgtgtcgccatattccaagattccaaaaagaccaacccagctggctatgcactcggcagc
atagagggccgatgtgctatacagtttgagcctgtcacaaacccgaaagacaacttcaca
ttcaagtgtcatcgctcaaatggtgctgctagttattcgtatcaagacatctacgcagtg
aactctatagcattccaccctgagcatggtacgctggcaacggcaggctccaacggtaag
ttcagcttctgggacaaagatgctcggaccaagctgaagacgtctgaagagatggagaac
cctatcacggcgtgtaagtttgatgctaagggcaatatattcgcctacgccgtcagctac
gactggtcaaagggtcatgaattctacaatcctcagaagaagaactacatcttcctcaga
gggaacgccatggaggaattacggccaagaaataggaagagataa

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