Entry |
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Name |
(RefSeq) probable ATP-dependent RNA helicase DDX43 isoform X1
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KO |
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Organism |
arun Luidia clathrata (European starfish)
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Brite |
KEGG Orthology (KO) [BR:arun00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:arun03041]
117304859
Enzymes [BR:arun01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117304859
Spliceosome [BR:arun03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117304859
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
21:complement(6729272..6759329)
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AA seq |
690 aa
MQHTVNIHAASKMSNFERNGFENRIQTQEYRSNGSGRSRTGWNSNTESIPIDSRDVGRII
GRQGNKIHELQDESGAMIKVPRDVTNDDGTIPVELRGTEEAIEKARLMIEELLKPPDNYQ
PPIALSAPPENKVRRPMINWQTACANAAMNKMEKWQDYPKLTKDFYIESPAIRNMSESEA
QEIREIMGVTITDDCKDNSRPVPKPVRTFEEAFQDYPEILREIRKQKFTKPSVIQSQGWP
VALKGHDLIGIAQTGSGKTLAFLLPALIHTDLQETPREQRGGPNVLVLSPTRELALQIKE
EVSKYSYKGIKSVCIYGGGSRKDQINIVQKGVEIVIATPGRLNDLIMNGIIDVKSVTFLI
LDEADRMLDMGFEPQIMKILLDVRPDRQTIMTSATWPEGVQRLARKYMKDPFHVNVGSLD
LSACHSVTQLIEVIDEEYKKERLIEFIECLREDEKLLVFVGRKSTADEMSSEMSLLNISV
QCIHGGREQFDREQALSDFKEGIVRILIATDVASRGLDIKDITHVLNYDCPSHIEEYVHR
VGRTGRAGRTGTSLTLMTRRDWRWAADIMHIMNEAGQEIPEDLIEMSERFERHKEKKEQE
RLQDQKDGFRQDRGRGRGGGGGRGRGGSGGGYGGGYGGGSSGGFGGGSGGGFGGGFGGGF
GGGRGGRRGGGRGGRRGGSSYDDFQGFYLS |
NT seq |
2073 nt +upstreamnt +downstreamnt
atgcagcacactgtcaatattcatgcggcaagcaagatgtcgaactttgaaagaaatgga
tttgaaaatcgcattcaaactcaagaataccggagtaatggcagcggcaggagtaggacg
ggatggaattccaacacagagtcgatacccattgactcaagggatgttggtagaataatc
ggtagacagggcaacaagatccatgagcttcaagatgagagtggtgctatgatcaaggta
ccaagagatgttacaaatgatgatgggacaatccctgtggagctacgagggacagaagaa
gctatcgagaaagctagattaatgattgaggagcttctaaaaccaccggacaattatcaa
ccgcccatcgccttatcagctccaccggaaaacaaagtgcgaagaccgatgataaactgg
caaacagcttgtgctaatgctgcaatgaataaaatggagaaatggcaagattatccaaag
ctcaccaaagatttctacattgaatcacctgctataagaaacatgagcgagagtgaagcg
caagaaattagagagatcatgggtgtgaccataacagacgattgtaaagataactccaga
ccagtcccaaaacctgtcagaacatttgaggaagcattccaggactatcctgaaatcctt
cgtgagatccgcaaacagaaattcacaaaaccttcagtcatacagtcccaaggatggcca
gtagcattaaagggtcatgatctgattggtatagctcagactggaagtggtaagaccctc
gccttcttgcttccagctctcatccacactgaccttcaagaaacaccaagagagcagcgt
ggagggccaaatgtgttggttctatccccaactagagagttagccttacagattaaagaa
gaagtcagcaagtattcctacaagggtatcaaaagtgtgtgtatatacggtggtggcagc
agaaaagatcagatcaatattgtccagaaaggagtggagatagtgattgcaactcctggc
agattaaatgatcttatcatgaatggtatcattgatgtgaaatcagtcacattcctgatt
ttggacgaagcagatcggatgttggacatgggattcgaacctcagatcatgaagattctt
ctagatgtacgaccagacaggcaaacaatcatgacaagtgcaacgtggccagaaggagta
caaagactggctaggaaatacatgaaggatccattccatgttaatgtgggatcactagac
ctatctgcttgccacagtgtgactcagttaattgaggtcattgatgaagaatacaagaaa
gaaaggctgattgaatttatcgagtgtctgagagaggatgagaaattgcttgtgtttgtt
ggacggaagtcaacagcagatgagatgtcgtctgagatgtcactcttaaatatatctgtg
cagtgcattcacggtggcagagaacagtttgacagggaacaagcactcagcgacttcaaa
gaaggtattgtgagaatccttatagctactgatgtagcatctcgtggtctggatattaaa
gacataactcatgtactcaactatgactgcccaagccatattgaagagtatgttcacaga
gtcggacgaactggacgagcagggcgaacaggtacatcattgaccctgatgacccgtaga
gattggagatgggctgctgacattatgcacatcatgaatgaggctggacaggaaattcca
gaggacttgattgaaatgtctgagagatttgagcgccataaggagaagaaagaacaagag
cgcctgcaggatcaaaaagatggcttcaggcaggatcgaggaaggggcaggggaggtggt
ggagggcgagggagagggggctctggtgggggttatggtggaggatatggtggggggtct
agtggaggatttggtggggggtctggtgggggatttggtggggggtttggtggcggattc
ggtggagggcgaggaggtaggcggggtggtgggcgaggtggaaggagaggcggaagtagt
tatgatgattttcagggtttttacctctcttag |