Luidia clathrata (European starfish): 117304859
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Entry
117304859 CDS
T10152
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43 isoform X1
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arun03041
]
117304859
Enzymes [BR:
arun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117304859
Spliceosome [BR:
arun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117304859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
CMS1
KH-I_KHDC4-BBP
Cas3-like_C_2
KH_KhpA-B
KH_N4BP1_1st
Motif
Other DBs
NCBI-GeneID:
117304859
NCBI-ProteinID:
XP_033645373
LinkDB
All DBs
Position
21:complement(6729272..6759329)
Genome browser
AA seq
690 aa
AA seq
DB search
MQHTVNIHAASKMSNFERNGFENRIQTQEYRSNGSGRSRTGWNSNTESIPIDSRDVGRII
GRQGNKIHELQDESGAMIKVPRDVTNDDGTIPVELRGTEEAIEKARLMIEELLKPPDNYQ
PPIALSAPPENKVRRPMINWQTACANAAMNKMEKWQDYPKLTKDFYIESPAIRNMSESEA
QEIREIMGVTITDDCKDNSRPVPKPVRTFEEAFQDYPEILREIRKQKFTKPSVIQSQGWP
VALKGHDLIGIAQTGSGKTLAFLLPALIHTDLQETPREQRGGPNVLVLSPTRELALQIKE
EVSKYSYKGIKSVCIYGGGSRKDQINIVQKGVEIVIATPGRLNDLIMNGIIDVKSVTFLI
LDEADRMLDMGFEPQIMKILLDVRPDRQTIMTSATWPEGVQRLARKYMKDPFHVNVGSLD
LSACHSVTQLIEVIDEEYKKERLIEFIECLREDEKLLVFVGRKSTADEMSSEMSLLNISV
QCIHGGREQFDREQALSDFKEGIVRILIATDVASRGLDIKDITHVLNYDCPSHIEEYVHR
VGRTGRAGRTGTSLTLMTRRDWRWAADIMHIMNEAGQEIPEDLIEMSERFERHKEKKEQE
RLQDQKDGFRQDRGRGRGGGGGRGRGGSGGGYGGGYGGGSSGGFGGGSGGGFGGGFGGGF
GGGRGGRRGGGRGGRRGGSSYDDFQGFYLS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacactgtcaatattcatgcggcaagcaagatgtcgaactttgaaagaaatgga
tttgaaaatcgcattcaaactcaagaataccggagtaatggcagcggcaggagtaggacg
ggatggaattccaacacagagtcgatacccattgactcaagggatgttggtagaataatc
ggtagacagggcaacaagatccatgagcttcaagatgagagtggtgctatgatcaaggta
ccaagagatgttacaaatgatgatgggacaatccctgtggagctacgagggacagaagaa
gctatcgagaaagctagattaatgattgaggagcttctaaaaccaccggacaattatcaa
ccgcccatcgccttatcagctccaccggaaaacaaagtgcgaagaccgatgataaactgg
caaacagcttgtgctaatgctgcaatgaataaaatggagaaatggcaagattatccaaag
ctcaccaaagatttctacattgaatcacctgctataagaaacatgagcgagagtgaagcg
caagaaattagagagatcatgggtgtgaccataacagacgattgtaaagataactccaga
ccagtcccaaaacctgtcagaacatttgaggaagcattccaggactatcctgaaatcctt
cgtgagatccgcaaacagaaattcacaaaaccttcagtcatacagtcccaaggatggcca
gtagcattaaagggtcatgatctgattggtatagctcagactggaagtggtaagaccctc
gccttcttgcttccagctctcatccacactgaccttcaagaaacaccaagagagcagcgt
ggagggccaaatgtgttggttctatccccaactagagagttagccttacagattaaagaa
gaagtcagcaagtattcctacaagggtatcaaaagtgtgtgtatatacggtggtggcagc
agaaaagatcagatcaatattgtccagaaaggagtggagatagtgattgcaactcctggc
agattaaatgatcttatcatgaatggtatcattgatgtgaaatcagtcacattcctgatt
ttggacgaagcagatcggatgttggacatgggattcgaacctcagatcatgaagattctt
ctagatgtacgaccagacaggcaaacaatcatgacaagtgcaacgtggccagaaggagta
caaagactggctaggaaatacatgaaggatccattccatgttaatgtgggatcactagac
ctatctgcttgccacagtgtgactcagttaattgaggtcattgatgaagaatacaagaaa
gaaaggctgattgaatttatcgagtgtctgagagaggatgagaaattgcttgtgtttgtt
ggacggaagtcaacagcagatgagatgtcgtctgagatgtcactcttaaatatatctgtg
cagtgcattcacggtggcagagaacagtttgacagggaacaagcactcagcgacttcaaa
gaaggtattgtgagaatccttatagctactgatgtagcatctcgtggtctggatattaaa
gacataactcatgtactcaactatgactgcccaagccatattgaagagtatgttcacaga
gtcggacgaactggacgagcagggcgaacaggtacatcattgaccctgatgacccgtaga
gattggagatgggctgctgacattatgcacatcatgaatgaggctggacaggaaattcca
gaggacttgattgaaatgtctgagagatttgagcgccataaggagaagaaagaacaagag
cgcctgcaggatcaaaaagatggcttcaggcaggatcgaggaaggggcaggggaggtggt
ggagggcgagggagagggggctctggtgggggttatggtggaggatatggtggggggtct
agtggaggatttggtggggggtctggtgggggatttggtggggggtttggtggcggattc
ggtggagggcgaggaggtaggcggggtggtgggcgaggtggaaggagaggcggaagtagt
tatgatgattttcagggtttttacctctcttag
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