KEGG   Luidia clathrata (European starfish): 117304859
Entry
117304859         CDS       T10152                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43 isoform X1
  KO
K17043  ATP-dependent RNA helicase DDX43 [EC:5.6.2.7]
Organism
arun  Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:arun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arun03041]
    117304859
Enzymes [BR:arun01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     117304859
Spliceosome [BR:arun03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    117304859
SSDB
Motif
Pfam: DEAD Helicase_C KH_1 ResIII CMS1 KH-I_KHDC4-BBP Cas3-like_C_2 KH_KhpA-B KH_N4BP1_1st
Other DBs
NCBI-GeneID: 117304859
NCBI-ProteinID: XP_033645373
LinkDB
Position
21:complement(6729272..6759329)
AA seq 690 aa
MQHTVNIHAASKMSNFERNGFENRIQTQEYRSNGSGRSRTGWNSNTESIPIDSRDVGRII
GRQGNKIHELQDESGAMIKVPRDVTNDDGTIPVELRGTEEAIEKARLMIEELLKPPDNYQ
PPIALSAPPENKVRRPMINWQTACANAAMNKMEKWQDYPKLTKDFYIESPAIRNMSESEA
QEIREIMGVTITDDCKDNSRPVPKPVRTFEEAFQDYPEILREIRKQKFTKPSVIQSQGWP
VALKGHDLIGIAQTGSGKTLAFLLPALIHTDLQETPREQRGGPNVLVLSPTRELALQIKE
EVSKYSYKGIKSVCIYGGGSRKDQINIVQKGVEIVIATPGRLNDLIMNGIIDVKSVTFLI
LDEADRMLDMGFEPQIMKILLDVRPDRQTIMTSATWPEGVQRLARKYMKDPFHVNVGSLD
LSACHSVTQLIEVIDEEYKKERLIEFIECLREDEKLLVFVGRKSTADEMSSEMSLLNISV
QCIHGGREQFDREQALSDFKEGIVRILIATDVASRGLDIKDITHVLNYDCPSHIEEYVHR
VGRTGRAGRTGTSLTLMTRRDWRWAADIMHIMNEAGQEIPEDLIEMSERFERHKEKKEQE
RLQDQKDGFRQDRGRGRGGGGGRGRGGSGGGYGGGYGGGSSGGFGGGSGGGFGGGFGGGF
GGGRGGRRGGGRGGRRGGSSYDDFQGFYLS
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgcagcacactgtcaatattcatgcggcaagcaagatgtcgaactttgaaagaaatgga
tttgaaaatcgcattcaaactcaagaataccggagtaatggcagcggcaggagtaggacg
ggatggaattccaacacagagtcgatacccattgactcaagggatgttggtagaataatc
ggtagacagggcaacaagatccatgagcttcaagatgagagtggtgctatgatcaaggta
ccaagagatgttacaaatgatgatgggacaatccctgtggagctacgagggacagaagaa
gctatcgagaaagctagattaatgattgaggagcttctaaaaccaccggacaattatcaa
ccgcccatcgccttatcagctccaccggaaaacaaagtgcgaagaccgatgataaactgg
caaacagcttgtgctaatgctgcaatgaataaaatggagaaatggcaagattatccaaag
ctcaccaaagatttctacattgaatcacctgctataagaaacatgagcgagagtgaagcg
caagaaattagagagatcatgggtgtgaccataacagacgattgtaaagataactccaga
ccagtcccaaaacctgtcagaacatttgaggaagcattccaggactatcctgaaatcctt
cgtgagatccgcaaacagaaattcacaaaaccttcagtcatacagtcccaaggatggcca
gtagcattaaagggtcatgatctgattggtatagctcagactggaagtggtaagaccctc
gccttcttgcttccagctctcatccacactgaccttcaagaaacaccaagagagcagcgt
ggagggccaaatgtgttggttctatccccaactagagagttagccttacagattaaagaa
gaagtcagcaagtattcctacaagggtatcaaaagtgtgtgtatatacggtggtggcagc
agaaaagatcagatcaatattgtccagaaaggagtggagatagtgattgcaactcctggc
agattaaatgatcttatcatgaatggtatcattgatgtgaaatcagtcacattcctgatt
ttggacgaagcagatcggatgttggacatgggattcgaacctcagatcatgaagattctt
ctagatgtacgaccagacaggcaaacaatcatgacaagtgcaacgtggccagaaggagta
caaagactggctaggaaatacatgaaggatccattccatgttaatgtgggatcactagac
ctatctgcttgccacagtgtgactcagttaattgaggtcattgatgaagaatacaagaaa
gaaaggctgattgaatttatcgagtgtctgagagaggatgagaaattgcttgtgtttgtt
ggacggaagtcaacagcagatgagatgtcgtctgagatgtcactcttaaatatatctgtg
cagtgcattcacggtggcagagaacagtttgacagggaacaagcactcagcgacttcaaa
gaaggtattgtgagaatccttatagctactgatgtagcatctcgtggtctggatattaaa
gacataactcatgtactcaactatgactgcccaagccatattgaagagtatgttcacaga
gtcggacgaactggacgagcagggcgaacaggtacatcattgaccctgatgacccgtaga
gattggagatgggctgctgacattatgcacatcatgaatgaggctggacaggaaattcca
gaggacttgattgaaatgtctgagagatttgagcgccataaggagaagaaagaacaagag
cgcctgcaggatcaaaaagatggcttcaggcaggatcgaggaaggggcaggggaggtggt
ggagggcgagggagagggggctctggtgggggttatggtggaggatatggtggggggtct
agtggaggatttggtggggggtctggtgggggatttggtggggggtttggtggcggattc
ggtggagggcgaggaggtaggcggggtggtgggcgaggtggaaggagaggcggaagtagt
tatgatgattttcagggtttttacctctcttag

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