Luidia clathrata (European starfish): 117305673
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Entry
117305673 CDS
T10152
Name
(RefSeq) DNA repair protein RAD50-like isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03440
Homologous recombination
arun03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117305673
03450 Non-homologous end-joining
117305673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arun03032
]
117305673
03400 DNA repair and recombination proteins [BR:
arun03400
]
117305673
DNA replication proteins [BR:
arun03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
117305673
DNA repair and recombination proteins [BR:
arun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
117305673
BRCA1-C complex
117305673
NHEJ (non-homologous end-joining)
MRX complex
117305673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_21
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_29
AAA_13
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
117305673
NCBI-ProteinID:
XP_033646424
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSSIEKLSIRGIRSFGHEDRERQVIEFFHPLTLITGQNGAGKTTVIECLKYVCTGDMPPG
AKGAAFIHDPKVAHETEIKAQVKLKFNDDTGKSVIITRNSVVTQKLKKAEFKSMEGVILR
TNELGERVSLSSKCAELDREMVASLGVSKPVLNNVIFCHQEEACWPLSDGKSLKGKFDEI
FAATRYIKALEVIRKLRSEQNTSIREFKTDVKYLKERKDKVKELSSELELKKTTLSAAKE
SVNHITKELHPLGTRIHEIEDREEEINLLSTEVAKRKAEKTQMDKNKQEIEDNLEFIFQG
TNDELRTIFQEHQAKNEEKEKQYAQTEKKLSRLGSSLQQVNDKKSQLLLKQGELGTEHKQ
HLETIKKRDRRIQKVASDMQFAGFTGTVFSDEKVEEFVELMDEELKKIDAEGKELLAQYR
SKEGGLETQLQEFRDTKTKLQHTVQMKSDMTTKNKDELKRINHQLSRVEASAHQLRELEE
ELKRAESELKEAESAMDLDKLRREVQKLQTEKQTHDTEMSQLSNEMSAISLQSKARAQLE
ILQKDKNAKEDQIRKIRGRHEEDVNRLLGHFPTDDIRNKLADYLMSRDAEVKNHLSAVQR
IRGQLSTKEANRKMIMDELKKKEEELRGFEARLLQECGSQDVGATLEQYQQSITNLQSEK
GALTGSSHLFERYIRSLQRAEAQCPLCHRGFDGQTEVDELVQELQDKLRMAPSKMAEKDQ
AIKQNRSKYDKLIELKPVKDFVTKLSETEIPGLRSKLTVINADIEKLKSSLNDEEDSLML
VQVDLSMANEMKPDIWQMDRCLAELKELEKRLAVQSQQLSGADAGRTIQQVNAERQDLEI
KLDTVNRTLDHKQRLINQQSKTLQVLGTRINDTTGEKLRLSGELQQQEKLHSQKAELTSA
NQSYDREIMDANKQLKPLESKLSKLMKDKEKLQREKEQKVEEHKSQYDLINQKKHDVNIS
TKNIKSYEASGKEEKLIKVRSDITSIEDNMAELTRNQKDLTTTINQLNEDIANQQVRERE
LSDNIQLRKKVAEISKVEEELNKLKEQLGGIDQENMKGEKRQLQTRYTKLTKEKNQADGR
QAVLKEEVKKAERELSSDMYSNADDKYNDMMIKLRTTEIANSDLDKYSKALDRAVMNYHH
MKMSEINKIIRDLWRVTYKGQDIDYVEIRSDEETGGTQQRKNYNYRVVMVKGDTALDMRG
RCSAGQKVLASLLIRLALAETFCLSCGILALDEPTTNLDKDNIESLAQALVEIIKSREQQ
RNFQLIVITHDEDFVELLGHSDYTDYFYRITKNHEFKSTVSRREIGTLQAVA
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaatagagaaactcagcatccggggtatacggagctttggtcatgaggaccga
gaacgtcaagttattgaattctttcatccactcactcttataacggggcagaatggtgct
ggtaaaacgactgtcattgaatgtcttaagtacgtctgtactggtgatatgccgcctgga
gctaagggggctgccttcatccatgacccaaaggtagctcatgagacagagatcaaagct
caggtcaagctgaagttcaacgatgacacaggcaaatcggttatcatcacaagaaatagc
gttgtcactcagaagttgaagaaggccgagtttaaatctatggaaggagtaatcctcaga
actaatgaacttggtgagagagtcagcctgagctccaaatgtgccgagttggatcgtgag
atggtggcgtctttaggggtctctaaaccagtcttgaataatgtcatcttttgtcatcaa
gaagaagcgtgttggcctctgagtgatggaaagtcactgaaaggcaagtttgatgagatc
ttcgcagcaacaagatacatcaaagcattggaggtcatcaggaagctaagatcagagcag
aataccagcattcgtgagtttaagaccgatgtgaaatacctgaaggaacggaaagacaag
gtcaaagagctgagttcggagctagagttgaagaaaacgacgctgagtgctgctaaggag
tctgtcaaccacatcacgaaagagttacacccattggggacacggattcatgagattgag
gatcgagaggaggaaatcaatctcctgagcacagaagttgccaaacgcaaagcggagaaa
actcagatggacaagaacaagcaagagattgaagacaacttggagtttatcttccaaggt
acaaatgatgagcttcgaacaattttccaagagcaccaggcaaagaatgaagagaaagaa
aaacaatacgcccagacggagaagaagctcagcaggcttggaagtagtcttcaacaggtt
aacgataagaaatcacaacttctgctgaaacaaggagagctgggaacagagcataagcaa
catcttgaaacgatcaagaagcgcgatagaaggattcaaaaggttgcctcggacatgcag
tttgctggattcaccggtactgtcttctccgatgagaaagtggaggaattcgttgagttg
atggatgaggagctgaagaaaattgatgcagagggcaaggagttactggctcagtacaga
agtaaagaagggggtttagaaactcaacttcaggagttccgggacaccaagacgaagctg
caacataccgtacagatgaagagcgatatgacaacaaagaacaaggatgagttaaagcgc
atcaatcatcagttgagtcgagtagaagccagcgctcatcaattgcgagagctggaggaa
gaactcaagagagctgagagtgagttgaaggaagctgagagtgccatggacttggacaaa
ctcagacgggaagtccagaaacttcagacggagaaacaaacacatgacactgaaatgagt
caattaagcaatgagatgtcagcgatatcattacaatccaaggcacgagctcagctagag
atacttcagaaagataagaacgccaaggaagatcaaatcagaaagattcggggtcgtcat
gaggaagatgtgaatcgtctcttgggtcacttccctacagatgacatcagaaacaaactt
gctgattatctcatgtcaagggatgctgaggtgaagaaccatttgtcggcagtgcagaga
atccgtggtcagttgtcaaccaaggaagctaacaggaaaatgatcatggatgagttgaag
aagaaagaggaggaattaagaggatttgaagctcggctcttacaggaatgtggaagtcaa
gatgttggagcgacacttgagcagtatcagcaatctatcaccaacctacagagtgagaag
ggtgctttgactgggagttcacatctctttgagcgttatattcgctccttgcagagagcg
gaggcacagtgccctctatgtcatagaggatttgatggacaaactgaagtggacgaactt
gtgcaagagctacaagacaagttgaggatggctccgagcaagatggcggagaaagatcaa
gcaatcaaacagaacagatccaagtatgataagctgatcgagcttaaacccgtcaaggac
tttgtgaccaagttatcagagactgaaattcccgggcttcgatccaagctaactgtcatc
aacgctgatattgagaagttgaaatcttcacttaatgatgaggaagattctttgatgctc
gttcaagttgatctgagcatggctaacgagatgaaaccagatatatggcagatggataga
tgcttagcagaacttaaagagcttgagaagagactagctgtgcagtcacaacagctatca
ggagcagatgctggaaggactattcaacaagttaatgccgagaggcaggaccttgagatc
aaactcgacactgtcaaccgcacactggatcataaacagcgactgatcaaccagcagagt
aagacgctccaggtactgggtaccaggattaacgacactaccggtgagaagttacgtttg
agcggagagcttcaacaacaggagaagcttcatagtcagaaagccgagttgacttcagcc
aatcagagctatgatagagagatcatggatgcaaataagcaactgaaaccactcgagagc
aaactgagtaagctgatgaaggataaagaaaaactacagagggagaaagaacagaaggtg
gaagagcataaatcccagtatgacctcatcaaccagaagaaacatgatgtcaatatatct
acaaagaatatcaaaagctatgaggcttctggaaaggaagagaagttgataaaagtacgc
agcgatattacgtccattgaagacaacatggctgagctgactcgcaaccagaaagatctg
accacaacaatcaatcaattaaatgaagacatcgctaaccaacaggtcagggagcgagag
ttatcggacaacattcagctgcggaagaaagttgcggagatctcgaaggttgaagaggag
ctgaacaaactgaaggagcagctcggaggaattgatcaggagaacatgaaaggagaaaag
agacaattacagaccaggtacaccaaattgaccaaagagaaaaaccaagctgatggtcgg
caggctgtcttgaaggaagaggtcaagaaagctgaaagggagttatcttcggacatgtat
agcaatgctgatgacaagtacaatgacatgatgatcaaactacggacaacggagattgcc
aacagcgatttggataaatattccaaggctttggatagagctgtcatgaactatcaccac
atgaagatgtctgagattaacaagataatccgggatttgtggcgagtgacatataaagga
caagatattgattacgtggagattcgttccgatgaagagaccggaggaacgcagcaacgt
aaaaactacaactatagggttgtcatggtgaagggagacacggcattggatatgagaggt
cgttgcagtgcaggtcaaaaggtcctagcatctttgctcattcgccttgcgttagcggag
accttctgcctaagctgtggaattctggctttagacgaaccaacgaccaatctagacaag
gataatattgagagcttggcacaggcattggtggaaatcatcaagagtcgagagcaacag
cgtaactttcagctgattgtgatcactcacgatgaagactttgttgaacttctaggacac
tcggactacacggattacttctatcgtatcaccaagaatcatgaattcaaatcaacggtt
tccaggcgtgaaattggaacacttcaagccgtggcgtga
DBGET
integrated database retrieval system
