Luidia clathrata (European starfish): 117305985
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Entry
117305985 CDS
T10152
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arun04040
]
117305985
04091 Lectins [BR:
arun04091
]
117305985
Ion channels [BR:
arun04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117305985
Lectins [BR:
arun04091
]
C-Type lectins
Others
117305985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
Dyp_perox_N
Motif
Other DBs
NCBI-GeneID:
117305985
NCBI-ProteinID:
XP_033646726
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
EINMNRSATFAIAFGFTTTNNATVSVVVLPSDPDTQLTCCLRFQGNSSEAAGNITRADCY
MNATLPLGESGYRLPTGDEERALRQSYTWMIDGTHLQENGIYQVLCSVDESTATSDDEEP
SPDETITITTGVYSSQCLFWDDDEEMWGTMGCKVGPLSSPDVTHCLCIHLTYFSSSFLVM
PNKVNFLEDSKLFLTFLENPVVVTTVGCILVAYVLVAVWARKRDKADELKAGVITLADND
PFAHYRYDVTIVTGMRRGAGTTAVATLTLVGSDGKSRPQLLAAPGRQVMQRGSADSFIIT
TRESIGEVTEVRIWHDNAGDSPEWYASRITVHDLELDESWFVMCNSWLAVDIGEGLIDRT
FPTASAEDLKDFKHLFSTRATKDFQDGHLWFSIFNRPPKSHFSCLQRVSCCLSLLMCVML
TSIMFYGVPNDPTEQVMDLGTFRITFTEILIGIESSILAFPINMLIVAIFRYSRPARRTS
KPSEVKRAVDTNHKPSTESRDAPPVHQDDVHLSYSNIDEFSPCTPYSSITSDTISNKSRS
PSQTHSSNQHLLPNSSLNTHDRLTTNMFLFSYLDEVVDALDVLPPEKFPSAEQYERARRE
LRSIVLTTMTVPTPSSSAVTGSGDSKLESQKGRCSCTFLPNGLPHGFIYIGWFLVISTTL
VSSYFTMLYGLKYGKKRSIDWLMSLGISLFQSIFITQPMKVLLLAAFVSMVMREWDADED
GSDDMEDVEIENAQEVYHQXLRKWKGARYRPPTQTSMESCRKRKALERKMYALLREIFGY
IMFMWLVIVIAYNQTDRHAYLLTQNIKDVFFSSDEFESVTNYNGFYEWADVDLVPGLYQG
DTTPIPMSFLIGGVRLRQLRVREDVCQVNPSFFGIIDGCLPSYTSDSEDTNSYNGSWRLH
NAIRNYSANSAVNKLDPWAYQEKIFSTIWGHITXYGTGGYAASLGLEETETRSFLERLRV
GRWLDARTRALSVEWTVYNANTNLFAVIRLLVEIPSSGGFIKTTLIRTVRFYRNVAGYQV
FVIFIEMLFSMYVVFYTAVEVMKFRREGRGYWKSAWNWLELFIILTCLWIIVVYIYRHVF
TEKLFAIFRTRPGDFVNFQDAASIAETFRYLLGLLLILCTVKFLHLLRLNPRTYLLTAVL
SSAAKDALAFAAYIGLVMCAFAVLFQLXLGTHTAAYSTMAFAFESLFILFLGDYDFDELA
AVDRYMTPIMVFTFQVVATFLFLNVLLSVLNNSMSYVRRNQEPSEDGTIGLLLLYKILSW
FGIKHKTEI
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
gagattaacatgaatcgcagcgcaacctttgccatcgcattcggattcactaccacaaat
aacgccaccgttagtgtcgtggtactgccttcagatccggacacccagctcacgtgctgc
ctccgattccagggcaatagttcagaggcagcgggcaatatcaccagggccgactgttat
atgaacgccactctgccgttgggggagtcagggtaccgactccctacgggtgacgaggag
agggcactgaggcagagttacacgtggatgatcgacgggacccatttacaagagaatgga
atctaccaggttttgtgttcggtggatgaatctacagctacgagcgacgatgaagaaccg
agtcctgacgagacgatcactattacgacgggagtctacagctcacagtgcttgttctgg
gacgatgatgaagaaatgtggggtaccatgggatgcaaggtcggtccactctcctcccct
gacgtcacacattgtctgtgcattcacctgacgtacttcagctccagctttctcgtcatg
cccaacaaggtgaacttcttggaggactccaagctgttcctgacgttcctggagaatccc
gtcgtcgtcaccacagtcggttgcatcctggtggcctacgtgctggtcgctgtctgggct
cgcaagagagacaaggcagatgaactaaaggcaggcgtcattaccctcgcagacaacgac
ccctttgcccactaccgttatgacgtcaccatcgtgacgggcatgcgcaggggagccggc
accaccgccgtcgccaccctgaccctggttggttcagacggcaagagccgacctcagctt
cttgccgccccgggtcgtcaggtcatgcagagaggcagcgcagactccttcattatcacg
acacgggagagcatcggtgaagtgacggaggtcaggatctggcacgacaatgccggagac
agtccagaatggtacgcaagtcgcatcaccgtccacgacctggagcttgacgagtcttgg
ttcgtcatgtgcaactcgtggctggcagttgacatcggcgagggcctgatagaccgcacc
ttcccaacagcaagtgcggaagacttgaaagactttaagcatctgttctcgacgcgtgcc
acgaaggacttccaagatggtcatttgtggttctctatcttcaaccgtccaccgaagagt
cacttctcctgtctgcagagagtctcctgctgcctgtcactcctgatgtgcgtcatgctg
accagtatcatgttctacggtgttcctaacgatccgacggaacaggtcatggatctcgga
acgttccggattacgttcaccgagatcctcatcgggatcgagagctcaatactcgccttc
ccgattaacatgcttatcgtggcgatcttcaggtactcccggccggctcggcggacctcg
aagcccagtgaggttaagagggccgtggacacaaaccacaaaccgtccactgagagtcgt
gacgctccacctgttcatcaagacgacgttcacctatcctattccaacatcgatgaattc
agtccctgcacgccgtactcgagcatcacctcggacacaataagcaacaagagcagatca
ccctctcagacccactcttcaaatcaacacttattgcccaactcgtcactaaacacccac
gacagactgaccaccaacatgttcctgttttcctacttggacgaggttgtggatgctctt
gacgtactacccccggagaaattcccatctgccgaacaatatgagcgcgctcggcgggaa
ctacggtccatagttctgacgacaatgactgtacccacaccgagttcgtcagctgtcact
ggtagtggcgactccaaactggagtcgcagaagggacgctgttcgtgcacgtttcttcca
aacggtcttcctcacggctttatttatataggatggtttttggtcatctcaaccactctg
gtgtcgtcttacttcaccatgctgtacgggctcaagtacggcaaaaagcgctccattgat
tggttaatgtctctaggaatatcgctgtttcagagcatcttcatcacgcagccgatgaag
gtgctgctccttgctgcttttgtttccatggtaatgagggagtgggatgcagacgaggac
ggcagtgacgacatggaagacgttgaaatcgaaaacgcacaagaagtctaccaccagnct
cttcgcaagtggaaaggcgcacgctacaggccgccgacgcaaacttcgatggagtcgtgc
cgtaaacgtaaagcattggaacggaagatgtacgccctcttgcgagagatctttggctac
attatgttcatgtggttggtgatagtgattgcgtacaaccagacggaccgacacgcgtat
ctcctcacccagaatattaaggatgtattcttcagcagtgatgaatttgaatcggtgacc
aattacaacgggttctatgaatgggcggatgtggatctggtacctggactctaccaagga
gacaccacacctataccaatgtcatttctcatcggaggagtccgtctacgccagctgaga
gtccgtgaagatgtctgtcaggtcaacccgtcctttttcggtatcattgatggatgcctt
cccagctacacttcagacagtgaagacaccaactcgtacaacgggtcgtggcgtcttcac
aacgcaatacggaactactctgccaactcggccgtcaacaaactcgacccatgggcgtac
caagagaagatattcagcaccatctggggtcacatcacantctacggcactggagggtac
gcggcgagtctaggactggaggagacggaaaccagatcatttctggagcgcttgagagtg
gggcgttggctcgatgcccgcacgagggcgctctcggtggaatggacggtctacaatgca
aacacaaacctcttcgcggtgatccggctcttggtagagattccgtccagtgggggcttc
atcaaaacaacactcatccggacggtccgattctaccggaacgttgcaggttaccaagtg
tttgttatattcatcgaaatgttgttctccatgtacgtggtcttctacactgccgttgag
gtcatgaagttccggagggaggggcgtggctattggaaatccgcttggaactggctggaa
ctcttcataattttaacatgtctatggatcatcgtagtctacatctacagacacgtcttc
accgagaaattattcgcaatctttcggacccgtccgggcgacttcgtcaacttccaggac
gcagcgtccatagcggaaacctttaggtatcttctcggtctactcctgatcctatgcacg
gtcaagttccttcatctgctccgactcaatccgcgaacgtacctcctgacggcagtgcta
agctcggcggccaaggacgccctggcgttcgccgcgtatatcggccttgtcatgtgtgcg
ttcgcggtgctcttccagcttnacctcgggacgcacacggcagcgtacagcacgatggcg
ttcgctttcgaatccctcttcattttatttctcggtgactatgatttcgatgagcttgcc
gctgttgaccgctacatgactcccatcatggttttcaccttccaggtcgtggccactttc
ttattcttgaacgtactcctgtctgtgttgaacaacagtatgtcgtacgtcaggcgaaac
caggagccctccgaagacggaactatcggtttacttttactttataaaattctatcatgg
tttggaatcaaacacaaaactgagatttaa
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