Luidia clathrata (European starfish): 117306155
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Entry
117306155 CDS
T10152
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arun04121
]
117306155
Enzymes [BR:
arun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117306155
Ubiquitin system [BR:
arun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
117306155
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
117306155
NCBI-ProteinID:
XP_033646777
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All DBs
Position
2:11111951..11182288
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AA seq
873 aa
AA seq
DB search
MATATNIPMSEDEDLQSDPVQGDLSYGSFAAMDFIILNVNGVDLSKATHEEAVEAFKNAD
EPIIVQVLRRATRNKATGDKDCATLCNVGTQTDLQSEDLLWKVLQRCPSPLDTSNGGIVI
DGLCEISPQEQMTVIDDDLMHDLDAMDNLDIPIIDEDGMDKAYEMEYEDITLTRGSDGTK
LGLTLCCFREEDAGVIISEVDPNSIAGDDGRIRAGDQILQINGEDVLNNDQALSLFAQKS
DTTSILVCRSQLQYDECLFDENSLLEDIQLDMLEQTHQESMQFTSCLLADHDSTQLDDDS
KTDTTGTTETTSLHHEKDSGVGRATDESVRNDESSGQENIPDDCSSTHQKYPAQQPSLGS
RDLRYSNDSFISNGVGDPEFPGHEISLEDCMKFQAALESKCDKHMRSDTDESMRGKESKV
MRLGSDSMETTSLSGDSLSRTSRNRSGASDQDEGTNHRDASKSNVWVTQQNGQKGLIPNG
KPQGSPEEPEYHGCEQESRKLEMIVENGQVGSPTHRPTDLGLDSLRDSDTHLPQISPHEQ
DTKTMTSSSSGSTRQHRAPRTVPGSPSRSKSSSGSRDRSKSSSSSGSSKEKTSPVKVATS
RKDCPVRQTPPPHPSIPYQRRPATNPHMRSQQFVHRNPYFLQQEEAAAHLITQNWKLQQQ
NLQLKKSLESLGPNQKLHSCQSIMSIPSHAKHYRSYLHLVNQNEENSLGTSQPNKKIINR
DEWKVKIRSDGTRYITKKNTRGKILKDRANKIQEERGGLTTDDEAVSEMKLGKYWSKEDR
KRHLERARDQRLRREYMMQSRMECLQEQMEEDGKKEPNIVELSQRKMLRKKSARKMMLDD
FTTVEEMLVHGTRVSPETAKTFCSNPLLNVTTV
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcgacaaatataccgatgagcgaggacgaagatctccagtcggatccggtt
cagggtgacctgtcctatggctcgtttgcagccatggatttcatcatactcaatgtaaat
ggcgtggacctctcgaaggcaacgcatgaagaagcggtggaggccttcaagaacgccgat
gagcccatcatcgtccaggtgctacggagggcgactaggaacaaggcgacgggggacaaa
gactgcgccacactatgtaacgtcggcacacagacagatctacagagtgaagacttactg
tggaaggtcctacagagatgcccgagtccactggatactagtaatggcggaatcgtcatc
gacgggctttgtgagatatccccacaggagcaaatgacagtcattgacgatgacctcatg
catgacctggacgctatggacaatttggacattcccatcatagatgaggacggcatggac
aaagcttatgaaatggagtatgaggatataacattaacgagaggcagtgatggaaccaaa
ctaggtttgacactttgttgttttagagaagaggatgctggggtcatcatcagtgaggtt
gatcccaacagcatagcaggtgatgatggcagaatcagagcaggggaccagatactacaa
atcaatggtgaagatgtactcaacaacgaccaagccctgtcattatttgcacagaagtct
gatactacctcaatactagtctgtagatcgcagttgcaatatgacgagtgtctttttgac
gagaactccttactggaggacatacagctagacatgcttgaacaaacacaccaagagtcc
atgcagtttacatcttgcttactagcagatcatgacagcacacaacttgatgacgacagc
aaaacagacacaacaggaaccactgaaacaacttccctccaccatgaaaaggacagcggg
gttggccgcgctacagacgagagcgtccgcaacgatgaaagctccgggcaggagaacatc
cccgatgactgtagcagcacacatcagaaatacccagctcagcagccgagcctaggcagc
agagacctgaggtacagcaacgacagcttcatatcaaacggtgttggagacccagagttc
ccagggcatgagatctccctggaagactgtatgaaatttcaggccgctctcgagagcaaa
tgcgataagcacatgaggagtgacacggacgagagtatgagggggaaggagtccaaagtg
atgaggcttggatcagactcgatggagactaccagtctgagcggtgattcactcagtcgc
accagccgcaatcgctctggggccagtgatcaggatgagggcacaaaccacagggatgcc
tcaaagagtaatgtatgggtgacgcaacaaaatgggcagaagggtctgatacccaacgga
aagccacagggtagcccggaggaaccagagtaccacggttgtgagcaggagtccaggaaa
ctggagatgattgttgagaacggacaggttggtagtccgacacacagaccaactgacctt
ggtctggattccctaagagactctgatactcacctcccacagatcagcccccatgaacaa
gacaccaaaaccatgacatcgagctcttcaggttcaacaagacagcatcgtgctccacgc
acagtccctggcagccctagtaggagtaagtcttcttccggttcaagagaccgatcaaag
agctcaagctcatcgggatctagtaaagaaaagacaagtccagtgaaagtagcaacaagt
aggaaagactgtcctgttaggcaaaccccaccccctcatccatcaataccgtaccagcga
cgaccagcaaccaatcctcacatgcgttcacagcagtttgtacaccgcaatccatacttc
ctgcaacaggaagaggcagcagctcatctcatcacccagaactggaagcttcaacagcag
aatctgcaactcaagaagagcctagaatctctgggccctaaccagaagctgcactcatgc
cagtccatcatgtccatcccaagccatgccaaacactatcgcagctatctacacctggtg
aaccagaatgaggagaactccctcggtaccagtcaacccaacaagaaaatcatcaaccgc
gacgagtggaaggtgaagatcagaagcgacgggacacgctacatcacaaaaaagaacacc
agaggtaagatcctgaaggatcgtgcgaataagatccaggaggaacgtggcgggttgacg
acggatgacgaggcggtgagtgagatgaaactgggcaagtactggagcaaagaggaccgt
aagcgacatctagagagagctcgggaccagcgtcttcgacgcgagtacatgatgcagtcc
cgcatggaatgcctacaggagcaaatggaagaggatggcaagaaagaaccgaacattgta
gaactaagccaacgcaagatgctgaggaagaaaagcgctcgcaaaatgatgctcgacgac
ttcactacagttgaagagatgcttgtccacggtacgagagtcagcccagaaactgctaaa
acattctgtagtaacccactccttaacgtcacaacagtatga
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