KEGG   Luidia clathrata (European starfish): 117306836
Entry
117306836         CDS       T10152                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
arun  Luidia clathrata (European starfish)
Pathway
arun03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:arun00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117306836
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arun03019]
    117306836
   03036 Chromosome and associated proteins [BR:arun03036]
    117306836
Messenger RNA biogenesis [BR:arun03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     117306836
Chromosome and associated proteins [BR:arun03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     117306836
    COMPASS/SET1 complex (yeast)
     117306836
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_EML Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SPT8 RMC1_N WD40_RFWD3 Beta-prop_WDR35_TULP_N PROPPIN NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_HPS5 MIOS_WD40 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 117306836
NCBI-ProteinID: XP_033647268
LinkDB
Position
2:5437671..5445972
AA seq 315 aa
MKLSDSVMRSFRVAKLFKDQNTERINSIDFSHNGETMISSSEDDSIVIYDCLEGKPKKTL
YSKKYGVDMIRFTHAVNTVIYTSNKMDDNIRYLSLHDNKYIRYFSGHTKKVVSLSMSPID
DSFLSGSLDKTVRLWDLRSPNCQGLMHLQGRPVASFDPEGLIFACGVNSELIKLYDLRSF
DKGPFTTFRLQQDRDCDWTSLKFSADGKLILISTNGAVIRLVDAFSGQPKQTFMGHLNQK
GLLLESSFSPDAKYVLSGSQNGKVHVWNAENGTKTAVLESKHCESPMHCIQFNPKFMMLA
TAAQHMAFWLPSIDE
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaagctctccgactcggtgatgcggagctttcgtgtggcgaaattattcaaggaccag
aacaccgagcgtataaacagcattgacttctcgcacaatggagagacaatgatctcgagc
agtgaagatgactctattgttatctatgattgcttggagggaaaaccaaagaagacactt
tacagtaagaagtatggagtagacatgatccgattcacacatgctgttaacacggtcatc
tacacatcaaacaagatggacgacaatattcgctatctctcgcttcatgacaataaatac
atccgctacttctctggacatacaaagaaggttgtcagtttaagtatgtctccaatagat
gacagtttcctctctggctctttagataagacggttagactatgggacctgcgatcacca
aactgtcagggtttgatgcatttacaaggcaggcctgtggcatcatttgacccagagggt
ttgatatttgcatgtggtgtcaactctgaacttataaaactctatgacctgaggtcattt
gacaagggtccatttacaaccttccggttacaacaagacagagattgtgattggacgtcg
ctcaagttcagcgctgatggcaaactgattcttatatccaccaacggtgctgtcataaga
ttggtagatgcattcagtggacaaccaaaacaaacatttatgggtcatctcaaccagaaa
gggttgttattagaatcatcatttagtcccgatgccaaatacgtcttatcaggttcacag
aacggtaaagtacatgtatggaatgccgagaatggcaccaagactgccgtattagaatcc
aagcactgtgagtcaccaatgcactgtatccagttcaaccccaagtttatgatgctagca
acggcagcacaacatatggcattttggttaccaagtatagacgagtga

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