Luidia clathrata (European starfish): 117306932
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Entry
117306932 CDS
T10152
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arun03016
]
117306932
Enzymes [BR:
arun01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
117306932
Transfer RNA biogenesis [BR:
arun03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
117306932
Prokaryotic type
Methylthiotransferases
117306932
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
DUF1450
Motif
Other DBs
NCBI-GeneID:
117306932
NCBI-ProteinID:
XP_033647408
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All DBs
Position
1:complement(28966846..28977887)
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AA seq
580 aa
AA seq
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MPACKEIMDDIEDIIGSNEVTPSERFSNKQQVVPKVRLRKKKRKDVDDETGSNTNSNQSS
AADIKTSTNGQEDEDEFDHKSIIPGTQKIYVKTWGCSHNNSDGEYMAGQLAAYGYQITGN
SQEADLWLLNSCTVKNPAEDHFRNDVKHAQQQGKQLVVAGCVPQGQPKLGYIHGVSIVGV
QQIDRVVEVVEETLKGHTVRLLKQKKKDGKKIGGAALDLPKIRKNPLIEILAINTGCLNQ
CTYCKTKHARGELGSYHPDELVERAKQSFQEGVCEIWLTSEDTGAYGKDIGVSITELLWQ
LVEVIPEGCRMRIGMTNPPYILEHLEEMSKILNHPRVYSFLHVPVQSGSDNVLLDMRREY
SVADFRRVVDFLRERVPGITIATDIICGFPTETDEDFEETMRLVEDYKFPSLFMNQFFPR
PGTPAAKMPQVPAQMKKARTKKLSILFHSYRTYDHKIGQTQQVLATEVSHDKQYYVAHNK
CYDQVLVPMKEEYMGKMMEVTIVETGKHFLKGVLVSEADVVTPSIAKPLELGQVSGLPQI
LQEEPAESWPWLRITLFIVVLAAVLDLARLLLYYFLYTGD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgccagcctgtaaagagattatggacgacatagaggacattattggttccaacgaagtc
acaccgtctgaaagatttagtaacaaacaacaagttgtgccgaaagtccgtctcagaaaa
aagaagaggaaagatgtcgacgatgaaaccggcagcaacaccaacagcaatcagtcgtcg
gcggctgacatcaaaacatcaacaaatgggcaggaagatgaagatgagtttgatcataaa
agtatcatccccggtactcagaagatctatgtgaagacttggggatgttcccataacaat
tcagatggggagtacatggccggccaactggcagcatatggttatcaaataacaggtaac
tcccaggaagctgacttatggctcctcaacagctgcaccgtcaaaaaccctgctgaggat
catttccgcaatgatgtgaaacacgcccagcagcaaggcaaacagctggtggtcgctggg
tgtgtcccccagggtcaacccaaactgggctacatccatggagtgagcatcgttggggtg
cagcagattgacagggtggtggaggtcgttgaagaaaccttaaaagggcacactgtgaga
cttttgaaacaaaagaagaaagatggaaagaagattggaggagcagcgttggatcttcct
aagattagaaaaaatccactgattgagattcttgctataaatactgggtgtttaaatcaa
tgcacatactgtaagacaaaacatgctcgaggggaacttggcagctatcatcctgatgaa
ctggttgagcgcgcaaaacagtctttccaagagggagtgtgtgagatttggctgacgagc
gaggatacaggagcctatggtaaagatataggtgtatctatcacagagctattatggcaa
ctggttgaagttattccagaggggtgcaggatgcgtattggaatgaccaaccctccatac
attctggagcatcttgaggagatgtcgaagatcttaaatcacccgcgagtgtattctttc
ctgcacgtacccgtacagtcaggatctgacaatgtgctactggacatgcgcagagaatac
agtgttgcagacttcagaagagttgtggacttcctgagggaaagggtaccaggcattacc
atagcaacagacatcatttgtggatttccaactgaaactgatgaggattttgaagaaacg
atgagactagtggaggattataaattcccctcgctgtttatgaaccagttcttccctcgg
ccaggtacccccgctgctaagatgccacaagtacctgcacaaatgaaaaaggcaaggaca
aaaaagctgtcgatattgttccacagttaccgaacgtacgaccacaaaattggacagacc
cagcaggtcctagctacagaggtgtcacatgacaagcagtattacgttgcacataacaag
tgctatgatcaggtgcttgtaccaatgaaggaggaatacatgggtaagatgatggaagtg
accattgtagagacgggtaaacacttcttgaaaggcgtcttagtgagtgaagcggacgtc
gttacaccatcgatagccaaacccctagaacttggccaagtatcaggcttaccacagatc
ctgcaagaggagccggcagagtcttggccttggttacggatcactctgttcattgtcgtg
cttgctgccgtcctagatctggcaagacttcttctctactacttcctgtatactggagat
tga
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