Luidia clathrata (European starfish): 117307312
Help
Entry
117307312 CDS
T10152
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arun03016
]
117307312
Enzymes [BR:
arun01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
117307312
Transfer RNA biogenesis [BR:
arun03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117307312
Prokaryotic type
117307312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
117307312
NCBI-ProteinID:
XP_033647919
LinkDB
All DBs
Position
2:8413943..8422128
Genome browser
AA seq
864 aa
AA seq
DB search
MIRNNMEGTSQDDPRSKLGMDIFLSQHKGFRGEIKTYPEDFRVTEVDLCGKLVRLQREEA
DKSTSTPSDNQICLGESDVRKPGEEVDKVLNPRTEECPSTSSTDEPLIFDELTDFKEMAS
TLEKVVGQEAMDGLANFSKQEFDCNEQVCPSITSTTSEVHDRQALSPKVVLAENPTTSEV
HDHQALNSKVVAVESHGDDFAAGFNLGEISGKDERTFTHKAVQCLYPHLKTAATRQAGNM
FHDVQVFTNPIYWEFQKLLSNPQTERVVRFACSKFSTATVSVGSSLDKKQRTSLHGLISK
HFGKFLESKTCERAGTQEVVIRFRERYSQKGRGRGVKRKGGALEEPAASGDGYTGFTLRK
ENLETLDALQQLGQALKVQASDFSYAGIKDKKAVTLQSVAVKGVNQKRFHQLICAGIIRG
ITVGNVQPLTKAIHPGDLTGNVFDILIRDVSCHDTEQHQQKDDGALLWQELASCFKGIQE
RGFVNYFGEQRFGQSCNGESQSAAIGQAILAGTYREAIKLILCPDGERNNSAKNAKRHFH
ETHNAKEALALMPKNKTRECIILKALHRHGLDRGGCVRALYCIPHGLRQFYIHAFCSLVW
NHMASERLRLYGCKVVAGDLVLMGNDKQGTRDKIHEVSEEDVQNAVFSIQDVALPLPGNS
IRYPGNRVGDAYKDYMEKVDLGSCTYRVTDLQVNIPGDYRRLVRRPEDLHWQLERSGESS
GQSSGQRSYRDISDTELLRRPEDLRWQLEKSGKSSGQRSDGDRSKTERAKIGSPSRDDEC
RFDGDKYPTLNGDLDSSGRALNTNYPKSISEILPLTESAPLKIEQDFCKKPDSHLLVNTR
NLRIKFKLPTSTYATVFLRELMKR
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaaataatatggagggaacatctcaagacgacccaagaagcaaattgggaatg
gatatttttctctcccagcataaaggtttccgcggagagattaagacatacccagaagac
ttccgcgtaactgaagtcgacttgtgtgggaagttagtgagactacagagggaagaagct
gataaaagtacctcgaccccaagtgataatcagatttgcctcggagagagtgatgtaagg
aaacctggggaggaggtggacaaagttctgaacccaagaactgaagagtgcccaagtact
tcatccacagacgaacctctcatctttgatgagttgacagactttaaggaaatggcatcc
acccttgaaaaggttgtcgggcaggaagcaatggatggtttggcaaatttttcaaaacaa
gaatttgattgcaatgagcaagtctgcccttcaattacatcaacaacttcagaggttcat
gatcgtcaagctttaagtccaaaagttgtcctagcagaaaatccaacaacttcggaagtt
catgatcaccaagctttaaattcaaaagtcgtcgcagtagagagtcatggcgacgatttt
gcagcaggtttcaatttgggtgaaatatcgggaaaggatgagcgaacttttactcacaaa
gctgtgcagtgtctctacccgcacttgaagacagctgccacgaggcaagctggtaacatg
ttccacgatgtgcaagttttcaccaaccccatctattgggagtttcaaaaacttctgtcc
aaccctcaaactgagagagtagttcgcttcgcttgttcaaagttttcaactgcgacggtt
tccgttggctcatcactcgataagaaacagaggacttcacttcatggattgatctcgaaa
cactttgggaagtttctggagagtaagacttgtgagagagccgggacgcaagaggtggtt
attcgtttcagagagaggtacagtcagaaggggcggggcagaggtgtgaagaggaagggt
ggtgcactggaggagcctgctgcatctggtgatggttacactggttttacgttgaggaaa
gaaaacttggaaactctggacgctcttcagcaacttggacaagccttgaaggtccaggcg
tcggactttagttacgctggaatcaaagataaaaaggcagtcacactccagtcagttgcc
gtcaagggtgtcaaccaaaaaaggtttcatcagttgatctgtgctgggataattcgaggg
attacagtcggtaatgtacaacccctcactaaagccattcacccaggagatctgactggc
aatgtgtttgatatactaatccgtgatgtttcttgccacgacacggagcagcaccagcag
aaggatgatggagccctcttgtggcaggaattagccagttgctttaaaggtatccaggag
cgagggtttgtgaattattttggagagcagaggtttggacagtcgtgtaatggcgagagc
caatcggctgcaatcgggcaagcaatacttgcagggacatatcgagaagctatcaagttg
attctctgcccagacggcgagaggaacaattccgcaaaaaatgctaagcgtcattttcac
gagacccacaacgcaaaagaggccctcgccctgatgcccaagaacaaaacccgcgagtgc
atcatcctcaaggcattacacagacatggcctggacagaggcggatgtgtgagggcgctg
tactgcatcccacacggactgcggcagttctacattcatgccttctgcagtttggtgtgg
aaccatatggctagtgagagattgaggttgtacgggtgcaaggttgtagccggggacctg
gtgctgatggggaacgacaagcaggggactagggataagattcacgaggtctccgaagag
gatgtccaaaatgctgtcttttccatccaggatgttgccttgccgttgcccggcaacagc
atccggtatccaggcaacagggtgggcgatgcttacaaggattacatggagaaggtggat
ttaggatcatgcacatatcgcgtaacagatcttcaggtgaacatcccgggggattatcgg
cggctcgtaagacgaccagaagatctccactggcagcttgagaggtctggagaaagttca
ggtcaaagttcaggtcaaaggtcatatagggatatctcagatactgagctcctgagacga
cccgaagatctccgctggcagctcgagaaatcaggaaaaagttcaggtcaacggtcagat
ggggataggtcgaaaactgagagagctaagattggatctccgtctcgggacgatgaatgt
cgttttgatggggacaaatatccaacattgaacggtgatctcgacagctccggtcgggcc
ttgaacacgaactatcccaaaagcatctctgaaattctgcctttgacggaaagtgccccc
cttaaaatagaacaagatttctgtaagaaacctgatagccatttactggtaaatacaagg
aatttgagaataaaatttaagctgccaacctcgacttatgcaactgtatttctcagagaa
ctaatgaaaagatga
DBGET
integrated database retrieval system
