Acipenser ruthenus (sterlet): 117394227
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Entry
117394227 CDS
T07327
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117394227 (cdh17)
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Major cadherins
117394227 (cdh17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Big_3_2
PH_23
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
117394227
NCBI-ProteinID:
XP_034776921
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Position
4:93059040..93078677
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AA seq
755 aa
AA seq
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MSAAYTFQATDPNVKSYKLGGETDNKTLIEKDGWLYLREPFDWETKKVHIITVEALDADL
KTVEGPVSITIIVKDINDNRPEFNQTLYDGVVRQHSRPGRPFMRVYATDKDNPSTPNAKL
NYSISNQIPDTYKVPLFQIDSKTGEISTTSAGAQNLDPNTGVEYILFLTVKDLEGLSDNA
FIRNTQVKIIVKENLWKSPNTVIITENSTDPHPIQITQVQWNEPGAVYVLQQKERYPNFP
FSIDEDGKISVTEPLDREERETYVLVVFAKDKANTNLEQPIEVYVSVTDINDNPPVCEVP
LTVLEVQENEKIGNQIGSLKAFDLDESDSLNSVLKYQILDQEPKLPSSTMFIIDEYSGKI
QIEHDRFQKTELPEYNLTVKVTDMAGNPTGFYTVCSVVIRIIEGNDQIPIFEKQQYELNP
IPEDTPVGTTLLTIGAIDDDEPKTGSSKILYHVVEGDAEGTFAISTDEETNQGHVVIRKP
LDFETMPVYKLRIDARNPEPLVPGVVYNASSTAYLNISVIDVNEAPVFGSIEYQAMVNEN
IPVGNTILKVNAIDPEGSSIRYRLEGDVFNWLKINSETGDIITNTLLDRERTDTYKVRVI
AVQFESPALESTVPVSINLVDVNDNPPMLTYPRTTLLLPSARAQGSANEDSFAKLKMRHI
SFEKIQYDVEVNIRDNGNLEKTYTVPVLFCKCSQNEHCYIDVQIQTGRPTVGATVGILLG
TLLIPGVALSLVFYKLKKNKNKEPKATTPDTNPML
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgcttacacgttccaagcaactgaccccaatgtaaagtcatataaacttggt
ggtgaaactgataataaaacactgattgaaaaagacggatggttatatctgagggagcct
tttgactgggaaacaaagaaggtccatattataacggttgaagcgctggacgctgacctt
aagacggtggaagggccagtctctatcacaattattgtaaaagatataaacgacaatcgg
ccggaattcaatcaaaccctctatgatggagttgtgagacaacactcaagacctggtagg
ccttttatgagagtttacgccacagacaaggataacccaagcaccccaaacgcaaagctg
aactacagcatttcaaaccaaatccctgacacctataaggttccactttttcaaattgat
agcaaaactggagaaatctctaccacctccgctggagctcaaaatttggacccaaataca
ggtgttgaatacatcctgtttcttacagtcaaagacctagaaggtttgtcagacaatgcc
ttcattaggaacacgcaggtgaaaattattgtgaaagagaacctgtggaaatctcccaat
acagtgataatcactgagaattctactgatccacatcccattcaaatcacacaggtccaa
tggaatgaacctggagctgtgtacgtacttcaacagaaggagaggtatccaaatttcccc
ttttcaattgatgaagatgggaagatttctgtgactgaacctctggacagggaggagagg
gaaacatatgtgctggtggtatttgcaaaagacaaagctaatacaaaccttgagcaacca
atcgaggtttacgtatcagtaacagatattaacgacaatccaccagtatgtgaagtgccg
ctgactgtattagaggttcaggaaaatgagaaaataggaaatcaaattggatctctgaaa
gcttttgacttggatgaatcagacagtttgaactctgtgttaaagtatcagattttggat
caggagccgaagctaccttcttctaccatgttcattatcgatgaatacagtggtaaaatc
cagattgaacacgacagattccagaaaacggagttgccggagtacaatttaacagtaaag
gtcactgacatggctggaaatcccacaggcttctacactgtctgcagtgtagtcatacga
ataattgaaggcaatgaccagattcctatatttgagaaacagcagtatgaactcaatccc
ataccagaagacacaccagtgggaaccacattactaacaattggggctatcgatgatgat
gagccaaaaactggcagttccaaaatcctgtaccacgttgtagaaggagatgcagaagga
acatttgctataagtacagacgaagaaacaaaccaaggacatgtggtgattagaaagccc
ctagactttgaaacaatgcctgtttacaaacttcgtattgatgccagaaacccagagcca
ttggtgcctggtgtggtctacaatgcaagctctaccgcatacctaaacatcagcgtgatc
gatgtcaatgaagcccctgtgtttggcagtatagagtaccaggccatggtcaatgaaaat
attcctgttggcaacaccattctgaaagtgaatgctatagaccctgaaggtagcagtata
aggtacagactggaaggagatgtctttaactggctgaaaatcaactctgaaactggggat
ataattacaaatacattgctggacagggagaggacagacacatacaaagtcagggttatt
gctgttcagttcgaatcgcctgcacttgagagtacagtgcctgtctctattaacttggtt
gatgttaatgacaatcccccaatgctgacctacccaagaaccacacttctgcttcccagt
gcaagagcccaaggcagtgctaatgaagattcctttgcaaaattgaagatgaggcacatc
agttttgagaagatacagtatgatgtcgaagtaaatataagggataatggaaatttggaa
aagacatacactgttccagtacttttttgtaagtgttcacaaaatgaacattgttacatt
gatgtgcaaatccaaactggaaggccaacagtaggggcgactgttggcattctactggga
acccttttaatccctggtgttgctctgtctcttgtgttttacaagttgaaaaagaataag
aataaggagccaaaagctacgacaccagacactaacccaatgctgtaa
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