Acipenser ruthenus (sterlet): 117394271
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Entry
117394271 CDS
T07327
Name
(RefSeq) partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04144
Endocytosis
arut04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117394271
09144 Cellular community - eukaryotes
04530 Tight junction
117394271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117394271
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
117394271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117394271
NCBI-ProteinID:
XP_033848281
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All DBs
Position
4:80569595..80627463
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AA seq
428 aa
AA seq
DB search
MNRSFNKSQTLRYLDCTAVEVKSKYGAEFRRFSLDRFKPGKFEEFYKLILHIHRLSNIEV
MLGYADVHGDLLPINNDDNFCKAVSMANPLLRVFIQKQEEVDYSSFGTNTLTRRKKAVVT
LRNDVNRKRPHISISMPQDFRPVSSIIDVDILPETHRRVRLYRHGSDKPLGFYIRDGTSV
RVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVTGKTLDQVTDMMIANS
HNLIITVKPVNQRNNIIRSSCTSGSSGQSTDSGSSTGHHSLPPPSGLNQHLLQNFHPDDM
DSDEEADIVIESSLKQPKKTATPPPKPLSQRSSSRGQLPTPPSPPRPPSTISNASTSIVQ
SHPSNGNNNLSFRLHKELSLQHHSNRGSISRESNGSLHKILNSLRTDPRHSLVLPRGGVE
EDGTVITL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggagttttaataaatctcagaccttgcggtatttggactgtactgcggtggaa
gtaaaaagcaagtatggggcagaattcagaagattctccttggatcgattcaaacctggc
aaatttgaagagttctacaagctcattcttcacattcaccggttatccaacattgaggtc
atgctcggctatgctgacgtccacggagatctgctacccattaacaacgatgacaacttc
tgcaaggctgtctccatggccaaccccttgcttagggtcttcatacagaaacaagaggaa
gtcgactacagcagtttcggcaccaacaccctgacgaggcggaagaaagcagtggtgacc
ctccgcaacgatgtcaaccgcaagcggccgcacatcagcatcagcatgccacaggacttc
cgtcctgtgtcctctatcattgatgtggacattctgcccgagacccaccgacgggtacgt
ctctaccgccacggctctgacaagcctctgggcttctacatccgggatggcaccagtgtg
cgggtcaccccgcacggtctggagaaggtgccgggcatcttcatctcgcgcatggttccg
ggcgggctggcggagagcacggggctcctggcggtcaacgacgaggtgctggaggtcaac
ggcattgaggtgacgggcaagaccttggatcaggtgacagacatgatgatagccaacagc
cataacctcatcatcaccgtgaagcctgtcaaccagcgcaacaacatcatccgcagcagc
tgcacctccggcagctcgggccagtccacagacagtggcagctccaccggccaccacagc
ctgccgcccccctccggcctcaaccagcaccttcttcagaacttccacccggacgacatg
gacagcgacgaggaggccgatattgtcatcgagagcagcctcaagcagcccaagaaaacg
gcgacgcctcctccgaaaccactgtcccaacgttcttcttccagaggccagctcccaacg
ccacccagtcccccacggcctccctccaccatctccaacgcctccacctctattgtacag
tcccaccccagcaacggcaacaacaacctgagcttcagactgcacaaggaactctctctc
cagcaccacagcaacaggggatccatcagcagggaaagcaacggcagcctccataaaatc
ctcaatagcttgaggacagaccccagacacagccttgtcctgcccagaggaggagtggag
gaggacggcaccgttatcacactttaa
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