Acipenser ruthenus (sterlet): 117394383
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Entry
117394383 CDS
T07327
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117394383
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arut01009
]
117394383
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117394383
03029 Mitochondrial biogenesis [BR:
arut03029
]
117394383
Protein phosphatases and associated proteins [BR:
arut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117394383
Membrane trafficking [BR:
arut04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117394383
Mitochondrial biogenesis [BR:
arut03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117394383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
117394383
NCBI-ProteinID:
XP_034776996
LinkDB
All DBs
Position
4:31866119..31910545
Genome browser
AA seq
1333 aa
AA seq
DB search
MNLYVFQVNNGSTLTFDTELAVQTVADLKHAIQVKYKIATQHQVLVVNGGECMVADRRVC
SYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSVENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLCKFETAYNNYQQ
SIEDIKQKLASLGNAVSVMAKIPLLECLTRHSYKESLERLSSPADQEGAEEETDEEKSTE
SVLHSGEPRASHKSSASFSISVEHPTQDCATQEDKETSSKSQDAVLQDCDPQEKSDLPLF
NVSLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLAECRDTIAKLDNQNMKAIKG
LEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIML
TNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELLERVR
VVEALGIVPQMYCLAVVEVVRRKIFIKHYREWTNALVKDGKQLYEAEKAKRDSFGKLFRK
SFLRNRLFRGLDSWPPTSFCTRKPRKFDFELPEISLCDLQFLQSCCPPEVQSFLRVPTLC
DFEPLHQHVQVLHQLVKAAQSVDEMSKTITDLLSEQKASSSQPTPKSTIVPRSESTTGAA
STSSKTPPSLNLQGGICQPLSLHGLLEDLSPDSIDAHTFDFETIGHPNMDTLLKQGSLDL
DSLAESPESDFMSAVNEFVIEENLTSPNVISDPQSPEMMVESLYSSVINAIDNRRIQDTT
TLEKENTKVAMLKVCIEKYRSAAEESQGSLKSIKEDLCHFRGLVQKEQRDFSFALKSVSG
EVRNIIDNIKYSHNENLKEMHQHEQQILQRDYENETQRLREESNLNQKNLEELKKVLLEL
EEGIENKESEISLLKNEKDMFLESENSKDQKLLDLEQKMLDQNSEIQELLQSRESLKGDL
AKLYLEIEDNKQKLKLEFENLEKSHLKELEERLQIRHAKELHELERENLENQENIVKENQ
EKLHQMQELHASEVQARENHLKELEVKVSELSDIRCKLEVEIALKEAETEEIRLLLDETR
SQQQETVRIEVEKETDALRREINDLKHQLQAMNDEYEVGLAELRALMRIEKDHCISELVD
SHEEETTLLHSELTSLQKKAMDVERGLKEQIRQFQNDLDNQINAQEKEKEEKERDFQEQQ
QHFNSVICGLQEENKLLSSNLQQEKQTNMQIFNKEKEEAVKAALADAFKDFEHQKKAIEE
KLLEKVKQLENQLKEKSFTEREVLSSSHTEALAGKPLTSNADLQEKLHEERASLLGHNLN
GLKKNKERRNADP
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgaacttatatgtgtttcaggtcaacaatggaagtaccctgacttttgatactgaactt
gctgtacaaactgttgcagaccttaaacatgctatccaggtcaaatataagattgctacc
cagcaccaagttcttgtcgtcaatggtggggaatgcatggttgcggataggcgtgtttgc
agttatagcgcaggcacggatacaaatccaatttttctgttcaacaaagagatgattttg
tgtgatcgccccccagctattcctaaaacaactttttcagtggaaaatgaaatggagctg
aaggtggaagaatctctaatgatgccagctgtttttcacactgttgcctcaagaacacaa
ctagctgtggaaatgtttgaagttgccaagaagctttgttcattttgtgaacgcctagtc
catgatgaacaccttcaacaccagggctgggctgccataatggctaacctggatgactgt
acactctcttatcagaagctgctttgtaaatttgaaactgcctataacaattatcaacag
agcattgaggacattaagcagaaacttgccagtctaggcaatgcggtatctgttatggct
aagattccactcctggagtgtctgaccaggcacagctataaagaaagtttggaaagactg
agctcacctgctgatcaggaaggagcagaggaagaaactgatgaggaaaaatctactgaa
tcagtgctacactctggagaacctagagctagtcataaatcgtcagcttcattttccata
tcagtggaacatccaactcaggactgtgcaacacaagaagacaaagagacaagcagtaaa
agtcaagatgctgtgctgcaagactgtgatccgcaagagaagagtgacttgccattattt
aatgtctctttattagactggataaatgtacaagatagaccaaatgacgttgaatctgtt
gtcagaaagtgctttgactccataaacagacttgatccaagaatcattcaaccctttttg
gcagaatgtcgggataccattgccaaactggataatcagaacatgaaggctattaaaggt
cttgaagacaggctatatgcactagaccagatgatagccagctgtaaaaagctggtaaat
gaacagaaggaactagcacagggatttttagccaatcagaaaagagctgaaaatctgaag
gacacttctgttctacctgacttgtgtctgagccatgcaaaccagctgatgatcatgtta
accaatcacaggaaactattggatattaaacagaagtgcaccactgccaaacaggagctt
gcaaacaatctgcaagtcagactaaagtggtgttgttatgtgatgcttcatgcagatcag
gatggggagaaactgcaggccttgcttcgtcttttaactgagctgttggagagagtccgg
gtggtagaggctcttggcattgttcctcagatgtattgcttggctgttgtggaggttgtt
aggcggaagatttttataaaacactacagagaatggaccaatgctctagtaaaggatgga
aaacagctctacgaagcagaaaaagctaaaagagattcatttgggaagttgttcagaaaa
tcttttctcagaaatcgcttgtttagaggacttgattcttggcctcccacttcattttgc
acacgtaagcctcgcaagtttgactttgagcttcctgaaatatctttatgtgatctgcag
tttttgcagtcttgctgtcctccagaagttcagtcttttctcagggttccaacactgtgt
gactttgagcctttacaccagcatgtacaggtccttcaccaactggttaaagctgctcag
agtgtggatgaaatgtcaaaaaccataacagacctactgagtgagcaaaaggcatccagt
agtcagccaactccaaagtccactatagtaccaaggtcggaaagcacaacaggagctgca
tctacctcttccaaaacgccaccctcactcaaccttcagggtggcatatgtcaacctctg
agtctccatggcctgttagaagatttatctccggatagcattgatgcccatacatttgac
tttgagaccattggccatccaaacatggatacacttttaaagcaaggatctctagacttg
gactccttagcagaaagcccagagtcagacttcatgtctgcggttaatgagtttgtcatt
gaggaaaacttgacttcccctaacgtaatcagtgatccacaaagccctgagatgatggta
gaatctctttattcctctgtcattaatgcaatcgacaacaggcgcatccaagatacaact
actttggaaaaggagaacaccaaagttgcaatgttgaaagtatgcatagaaaaatacagg
tcagctgctgaggaatcacagggcagtttaaagagcatcaaggaggatctttgtcatttt
agaggactggttcaaaaggagcagagagattttagctttgctttaaaatctgtatcggga
gaagtaagaaacataattgataatattaagtattctcacaatgagaacttaaaagaaatg
catcaacatgaacaacaaatccttcaaagggattatgaaaatgaaacacaaagattgagg
gaagaatccaatttgaaccagaaaaacctggaggaattaaaaaaggtgttgttagagctt
gaagaaggcatcgaaaataaagaaagtgaaatttctttgttaaaaaatgaaaaagacatg
tttctagaatcagaaaatagcaaagatcaaaaactgcttgacttggagcaaaaaatgcta
gaccaaaatagtgaaatacaagagctattgcaatctagagagtcactgaaaggagattta
gctaaattatatcttgagattgaagataacaagcaaaaactaaagcttgaatttgagaac
cttgaaaagagtcacctaaaggaactggaggaaaggctacagatcaggcatgccaaagaa
ctgcacgaactggaaagggaaaaccttgaaaaccaagaaaacatagtaaaagaaaaccaa
gaaaagctgcatcaaatgcaggaactccatgcatcagaagttcaagcacgtgaaaatcac
ctgaaggaacttgaagtcaaagtttctgagctatctgatataaggtgcaagttggaggtc
gaaatagccctaaaggaagcagagacagaagaaataagactgcttttggacgaaaccaga
tcccagcagcaagagactgtgaggatcgaggttgaaaaggaaactgatgctttgagaaga
gagattaatgatttaaaacatcaacttcaggctatgaatgatgagtatgaagttggactt
gcagagctgagagctctaatgagaattgaaaaagaccattgtatctctgagttagttgac
agtcatgaagaagagaccactcttctccactctgagctaacatctttacaaaaaaaagcc
atggatgttgaaaggggccttaaagaacaaattaggcagtttcagaatgaccttgataat
cagattaatgctcaagagaaagaaaaagaagaaaaggaaagggattttcaggagcagcaa
caacattttaatagtgttatatgtggtcttcaggaagaaaacaaacttctatcgagcaat
ctgcagcaggagaagcagactaatatgcagatttttaacaaggaaaaggaggaagccgtc
aaagctgccctggcagatgcttttaaagactttgaacaccagaagaaggctattgaagaa
aaactgttagaaaaggtcaaacagcttgagaatcagttgaaagaaaaaagctttacagaa
agagaggttttgtcatctagtcatactgaggcacttgctgggaaaccactaactagtaat
gcagatcttcaggaaaagttacacgaagaaagggcctctttactgggacacaacttgaac
ggcttgaaaaaaaacaaagaacgaagaaatgcagacccttaa
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integrated database retrieval system
