Acipenser ruthenus (sterlet): 117394423
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Entry
117394423 CDS
T07327
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04145
Phagosome
arut04814
Motor proteins
arut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117394423
09142 Cell motility
04814 Motor proteins
117394423
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117394423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117394423
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arut04812
]
117394423
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
117394423
Cytoskeleton proteins [BR:
arut04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117394423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Dynein_IC2
WDR55
WD40_Prp19
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
117394423
NCBI-ProteinID:
XP_033848566
LinkDB
All DBs
Position
4:97018222..97120932
Genome browser
AA seq
647 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKESEMQQKTEPVHEDSDLDRKRRETE
ALLQSIGISPEPPLVQPLHLLTWDTCYFHYLVPTPMSPSSKSVGTPSEAGSQDSVECGAV
GRFRTLQWDTDPSVLQLQSDSELGRRMHRLGASKITQVDFLPKEVVSYCKETQTPLAAHP
AEEDEDDEEIAETKPGPESELQDEEQKEEAKEAHPRELTEEEKQQVLHSEEFLLFFDRTI
RIVERALAEESDIFFDYSGRDLEDKEGDIQAGANLSFNRLFYDEHWSKHRVVTCLDWSPQ
YPELMVASYNSNEDAPHEPDGAALVWNMKFKKATPEYIFHCQSSVMSVCFARFHPNLVVG
GTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGKMCSW
NLDMLSQPQESMELVYNKSKPVAVTGMAFPTGDVNNYVVGSEEGTVYTACRHGSKAGIGE
MFEGHQGPVTGISCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDV
MWSPVHPALFACVDGMGRLDLWNLNNDTEVPTASVTIEGASALNRVRWAATGKEVAVGDS
EGRVWIYDVGELAVPHAEDWTRFARTLVEIRANRADAEEEGAVELSN
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaaagtgacctgaaagctgagctggaacgcaaaaagcagcgcttagctcag
atacgggaggaaaagaagagaaaggaagaagaaagaaaaaagaaagagtccgagatgcag
caaaaaacagagccagttcatgaagattcagaccttgaccgtaagagaagagagacggag
gcattactgcagagcattggcatatcccccgagccaccactagtgcagccgctacatttg
ttaacatgggatacctgttattttcattatttagtcccaacccctatgtctccttcttcg
aaatcagtgggcacacccagcgaagcaggcagtcaggactcagttgagtgtggagcagtc
ggaagatttaggaccctacagtgggacactgacccctctgttctacagctacagtctgac
tctgaacttggtcgtagaatgcacagactgggagcatctaaaatcacacaggtggacttc
ctaccaaaagaagtggtgtcatactgtaaagagactcagaccccactggcagctcatcca
gctgaagaggatgaagatgatgaggaaattgctgaaacaaaacctgggccagagtctgag
ctacaggatgaggagcagaaggaagaagcaaaagaagctcacccaagggagctgactgag
gaagagaaacagcaggttttgcactcagaagaatttctcctcttctttgatcgtaccatt
cgcattgtggagcgagctctggctgaggagtctgacatcttctttgactacagtggccgg
gatctggaggataaagaaggtgatatccaagctggagccaacctctctttcaatcgatta
ttctacgatgagcactggtcaaagcaccgagttgtcacctgcttagactggtccccacag
taccctgaacttatggttgcttcttacaatagcaacgaggatgctccccatgaaccagat
ggtgctgccttagtgtggaacatgaagtttaagaaagctactccagagtatatattccat
tgccagtcttctgtgatgtcagtctgctttgctcgatttcacccaaacctggttgttggt
ggcacatactcagggcagatcgttctgtgggataaccgcagtcacagaagaaccccagta
cagcgaacgcctctgtctgctgctgctcacactcacccagtgtattgcgtaaatgtggtc
gggactcagaacgcaaacaatcttattacagtctccacagatggcaaaatgtgttcatgg
aacttggatatgctctcccagccacaggagagcatggagctggtgtacaacaagtccaag
cctgtggctgtgacaggcatggcctttccaacaggagatgttaacaactatgtggttggg
agtgaggaaggtacagtttacacggcatgtcgtcatggcagtaaggctggtattggtgag
atgtttgaaggtcaccagggtcctgttactggcatcagttgtcatatggcagtcggcccc
attgacttctcccatctttttgtcacttcatcatttgactggacagtcaaattgtggacc
acaaagcacaacaaacctctctactcctttgaagacaatgccgactatgtctacgacgtc
atgtggtccccagtgcatcctgcactctttgcctgtgtggatggaatgggccgtttggat
ctctggaacctgaataatgacacggaggtgccaactgctagtgtgacaattgagggggct
tctgccctgaaccgggtccgctgggcggcgacaggtaaagaggtggcagtcggggattcg
gagggtcgagtctggatctacgatgttggagagcttgcagtcccccatgccgaggactgg
actcgttttgccaggaccctggtggagatccgcgcaaacagagctgatgcagaagaggaa
ggagctgtagaactgtctaactag
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