Acipenser ruthenus (sterlet): 117394622
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Entry
117394622 CDS
T07327
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117394622 (vps50)
Membrane trafficking [BR:
arut04131
]
Protein recycling
Others
EARP complex
117394622 (vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
117394622
NCBI-ProteinID:
XP_033848864
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Position
4:96222845..96391412
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AA seq
988 aa
AA seq
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MQKIKSLMTRQGPKSLQESLSDLSPVENVRIPSKEELREMREQPIDPQAEQEIINSIEEV
YFSSDSFDIVEHELKKLPPVLNLQEIEEYRDKLKKQQAAVSKKVADLILEKQPSYVKELD
RVTSLQANLQLGAVICTNARRQLGFAKEGFTQASLGLLANQRKRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKSFDINHYIKVQQAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLSDLCKALWEVMLSYHRTMEWHEEHDNEETVPASDG
SSTVGTEESNFDRSYVKKKLEHGLTRIWQDVQLKAKTYLLGTDMSNFKYDDFIFVLDVIS
RLMQVGEEFCGSRSEVLQESIKKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFSI
VQLHEFKFMGRSRSPSVSPSKHASTASTAAMSLFEQYHNGGNPFEMQTDSKDDETEDVLA
SNGYESDELEKCAYQDYDSDSDVPEELKRDYVDEQTGDAPVKSVSRDTLRSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCMSQLFDYYLYAVYAFFGRNDMH
VPNPSVSVPGKEQSTPRQTTVCSYESSGLGLISSRLRTTLNRIQESLIDLEAAPETTGSH
VAAEERKEKVPSPHLSQLVVLTASGTLYGLAERVVATESLVFLAEQFECLQTHLDTMIPA
AKKPFLQQFYSQTISTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNIYV
DVLLKEFEQFNKRLGDVSRQVCIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRAL
MQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMEEFIKNHREYSIKQLTNLV
NVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagataaagtcactcatgacccgacagggtcccaaaagtctccaggaaagtttg
agtgacctcagtcctgtggagaacgtcaggattcctagtaaggaagaactacgggaaatg
agagagcaacctatcgatccacaagcagaacaagagataattaatagtattgaggaagtt
tacttctccagtgattcttttgacattgtggagcatgagctaaagaaacttcctcctgtt
cttaatcttcaagaaatagaagaatacagagataaactgaagaagcaacaagcggctgtg
tcaaagaaggtagcagatctaatcctggaaaaacagccttcatatgttaaggaattagac
cgtgttacttcactgcaagcaaaccttcagttgggagcagtcatctgcacaaatgcaaga
aggcaacttggttttgcaaaagaaggttttacacaagcaagccttggccttcttgccaat
caaaggaagagacagttgctgactggactgctgaaatctctgagaacaattaaaacactg
caaaggactgatgtaagattaagcgaaatgttagaggaggaagattatcctggagctatc
cagttgtgcttggaatgccaaaaggcagccagcacattcaaacactacagctgtataagt
gaattgaattcgaaactgcaagacactcttgaacaaatagaggaacaactggatgtagcc
ttgtcaaaaacctgcaagagctttgatatcaatcattacatcaaagttcagcaggcatac
acgcttctgggaaaaactcaaactgcaatggaccaactacatatgcacttcacccaagca
attcacaacacggtgttccaggtggttctcgggtatgtggagctgtgtgctgggaatgct
gacaccaagtttcagaagatgcagtacaaggacctctgtacacatattactccagacagc
tacattccctgcctttctgatctctgcaaagccctctgggaagtcatgctcagctaccat
agaactatggagtggcatgaggagcatgacaatgaagagacagttccagcctcagatggc
agcagcacggttggcacagaggagtccaattttgatcgcagctatgtgaaaaagaaatta
gagcacgggctgacccgcatctggcaggatgttcaattaaaagccaaaacctatttgctt
ggaacggatatgtccaactttaagtatgatgacttcatatttgtactggatgttatcagc
aggctgatgcaagtcggagaggagttttgtggcagcaggtcagaggttttgcaagagtct
attaaaaagcaaagtgtgaactatttcaaaaactatcacagaacacgcctcgaggagcta
agaatgttcttagaaaatgaaacatgggaactttgccctgttaagtcgaacttcagcatt
gtgcagctgcatgaattcaaattcatgggcaggtcacgctctccttcagtgtcccctagc
aagcacgcctccacagcatccacagcggcgatgtccctgtttgaacagtaccataatgga
ggaaatccatttgagatgcagacagacagcaaagatgacgaaacagaagatgtgctggct
tctaatgggtatgagtctgatgaattggagaaatgtgcctaccaggattatgatagtgac
agtgatgttccagaagaactcaagagagactatgtggatgagcaaactggagacgctcct
gtgaaaagtgtgtctcgagataccctcaggagcaggaagaagtcagattatagccttaat
aaggtgaatgcacccatcttgacgaacactaccttgaatgtaatcaggcttgttgggaag
tacatgcagatgatgaatatcctgaaaccaatagcctttgatgtgatccactgcatgtcc
cagttatttgattactacttgtatgcagtctacgcattctttggccgaaatgatatgcat
gtgcctaatccatcagtttctgtgcctggaaaagaacaaagcactcctaggcagacgaca
gtctgctcgtatgaatcatccgggcttggtctaatcagcagtagactccgaacaactcta
aatagaatacaagagagtcttattgacctggaggcagcaccagaaactactggcagccat
gtagctgctgaagagagaaaggaaaaggtgccaagcccacatctcagccagttggtggtt
ttaacagccagtggaacactgtatggacttgcggaaagagtggttgcaacagaatccttg
gtgtttctggctgagcagtttgagtgtcttcagactcatcttgacactatgattcctgca
gcaaagaagccctttcttcagcagttctattcccagaccatatcaactgccagtgaactg
cgaaaacccatttactggattgtggctgccaaagccatagattatgaacagatgctgctg
cttatggctggagttaaatgggacataaaagaaattatgtcgcaacacaatatatacgtg
gatgtccttttaaaggagtttgagcagtttaacaagagacttggagatgtttccaggcag
gtgtgcatccctttgcctgtgtctaatgtactttgggaacactgcattcgactggctaac
agaactcttgtggaaggctatgctaatgtcaagaaatgcagcaatgaaggacgtgccctg
atgcaactggactttcagcagtttttaatgaagctggagaagctgaccgacatcaggccc
attccagataaagagtttgtggagacctacattaaagcctactatctgactgagaacgat
atggaagagttcatcaagaaccacagggagtattccatcaagcagctgaccaatctggtg
aatgtttgcctcggatcccacataaacaagaaggcgagacagaaactgttagcagctatt
gatgacatcgacagaccaaaaagatag
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