Acipenser ruthenus (sterlet): 117394674
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Entry
117394674 CDS
T07327
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04217
Necroptosis
arut04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117394674
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117394674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117394674
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117394674
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117394674
Multi subunit type E3
LUBAC complex
117394674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
IBR
Zn_ribbon_RanBP
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
ubiquitin
IBR_1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117394674
NCBI-ProteinID:
XP_033848990
LinkDB
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Position
4:complement(21158499..21188264)
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AA seq
718 aa
AA seq
DB search
MALSSEGRAQPPPLSFMGLSQAGCSTVLMSVRVSVCHSGIRPLCLPGAGDESLRLQLSMD
PGKAGEFRLALRDTSGASTGRSVSIVEYNLRDIRYELKSSRCHELALLGQPDERMTFNFK
DEKEAQEWSTIITTSVREVQRVAATSSGTPLNMPPSRAQDRTLQLEHLLPKASAELPKTE
ELSSQLSQAIEAGDMQTASDCATALARQQVSLRIQQKESNYMEREISIKVGVEDATTSCC
VTVKVFPYMTISSLKQQVFRDYGFHSRVQRWVIGQSLCADSRTLASYGMRRDGDTAFLYL
VSARQARLSRQRYEEEQEITMLSAGEPLSNGNRLPPLDRRGYSTLPTRLPQNRVPVRDGG
AERMGVGDIRELINLEMLQLNEALSLNPANRAPSSTMPSGPQTGWSCPSCTYINKPTRPG
CEICSHDRPVDYVVPGGYQPDEEELWRIQQEKEAVWQYQQVREAQRRLNFETLLQTDSQD
LVPNQQGVECRICYLELGPGEGVLLRECLHCFCRDCLRSVINLSDDPEVSCPYRDEAYAC
HSKIQEREIRALVSPEQYRCYLDRGLAVAESRSDSSYHCATPDCRGWCEYEDSVNEFPCP
ICKKRNCLLCKAIHEGMNCRQYQDDLQFRAINDSAARKTTEMLNTLVQTGEAMHCPKCRI
IVQKKEGCDWIRCTVCHTEICWVTKGPRWGSGGPGDISGGCRCNVNRQRCHPQCQNCH
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggctttgagctccgagggccgggcgcagcccccgcctctctcctttatggggctctca
caggccggctgcagcaccgttctcatgtcggtgcgggtctccgtctgccactcgggtatc
agaccgctgtgtctacccggggccggggatgagtcgctccggctccaactcagtatggat
ccggggaaggcaggggaattccgcctagcgctgcgtgacaccagtggcgccagcacaggc
agaagcgtgtccatcgtggaatacaacctgcgtgacatccgctacgagctgaagagcagc
cgctgtcatgagctggcactgctgggacagcctgacgagcgcatgaccttcaacttcaag
gatgagaaggaggctcaggagtggtcgaccatcatcaccacctctgtgcgcgaggtgcag
agagtggctgccacctcctcgggcaccccactgaatatgcccccctctcgggcacaggac
cgcacactgcagcttgaacacctgttacccaaagcctctgctgaattgcccaagacagag
gagctgtcgtcccagctgtcccaagctatcgaggccggagacatgcagacagcttccgat
tgtgcaacggcacttgctcgccagcaggtgtcactgcgcatccagcaaaaagagagcaac
tacatggagagggagattagtataaaggtaggggtggaagatgctacaacttcctgttgt
gtcactgtaaaagtcttcccctacatgaccatatcctcactaaagcagcaggtgttccgt
gactacggcttccactcacgtgtgcagcgctgggttatcgggcagagcctctgtgcggac
agtcgaacactggcctcctacgggatgcggcgtgatggtgacactgcctttctgtacctg
gtgtcggcgcggcaggctcggctctctcgccagcgctacgaagaggagcaggagatcacc
atgctgtctgccggagagcccctcagcaacggcaaccggctgcccccgctggacaggagg
ggctatagcaccctgcccaccagactgccgcagaatagagttccagtgagagatggcggg
gcagagcggatgggtgttggtgacatcagagagttgatcaacctagagatgcttcagctg
aacgaggctctgagtctcaacccagccaacagagcccccagctccacaatgccatctggc
cctcagactggctggtcttgtccttcctgcacctacattaacaagcccacacggccgggc
tgtgaaatctgcagtcatgaccgccccgtggactacgtggtaccggggggttatcagccc
gacgaggaggagctctggaggatccagcaggagaaggaggcagtctggcagtaccagcag
gttcgtgaggcgcagcgcaggctgaacttcgagacgctgctgcagacggactcgcaggac
ctggttccgaaccagcagggggtggagtgtcggatctgctatctggagctggggccgggg
gagggggtgctgctgagagagtgtctgcactgcttctgcagagattgcctgcgatcggtg
atcaatctgagtgacgatcctgaagtgtcgtgcccgtatcgtgatgaagcgtacgcctgt
cacagcaagatccaggagcgcgagatccgtgcactggtgtctccggagcagtatcgttgt
tacctggaccgtggtcttgcagtggcggagtctcgctctgacagcagctatcactgcgct
actccagactgccggggctggtgcgagtacgaggacagtgtcaacgagttcccctgcccc
atctgcaaaaagcgcaactgtctgctgtgcaaggcaattcatgaggggatgaactgtcgg
cagtaccaggatgacctgcagttccgtgccatcaatgactcggccgcacgcaaaactact
gagatgctcaataccctcgtccagacaggtgaggccatgcactgccccaagtgcaggatc
attgttcagaagaaggagggctgtgattggatacgctgcaccgtgtgtcacaccgagatc
tgctgggtcaccaaggggccgcgctgggggtcggggggcccaggagacatcagtggcggg
tgccggtgtaacgtcaacagacagaggtgccacccacagtgccagaactgccactag
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