Acipenser ruthenus (sterlet): 117394965
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Entry
117394965 CDS
T07327
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
arut03037
]
117394965 (nphp3)
Cilium and associated proteins [BR:
arut03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
117394965 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_MalT
TPR_2
TPR_16
NPHP3_N
TPR_19
NACHT
AAA_16
TPR_11
KAP_NTPase
AAA_22
DUF2225
AAA_19
DUF4635
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
117394965
NCBI-ProteinID:
XP_033849645
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Position
4:complement(46066315..46094338)
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AA seq
1310 aa
AA seq
DB search
MGTASSLVSPGEVIEDAYGGGGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTASV
DLEYAAEYDRLKKDYDIFRVSKNNEIASMQKKEAKLDKENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDRVKRQFKIFRETKEKEIQDLLRAKRDLETKLQRLQAQ
GIQVYDPADSDSDDNRTDMTNSATGTHCEYWSGGVLGSEPSMGSMMQLQQTFRGPEFAHS
LIDVEGPFANVNRDDWDAAVASLLQVSPLVSQSLWSNTVRCYLMYSPETQAEVDVFLKET
HKLQKFCEGLGHFYLNIYFPEDSASCYSSERKEEIEKSSVCVLFLKSFISRSVLEDCEEA
FFKNPEARLFLIYHRTVDREPPSALAREFIEKVTKADKANKAKVIDHCGDPEEGAYKTFT
QLEKIIKQELFGYENLDFENKDSGIEDDPSSHEEEDFGDVLWDMHDEQEQIEAFQQASKS
TCQLGFEKYIERLNDMVAAPPPIPPLLVSGGPGSGKSLLLSKWIELQQKRSPNTLILYHF
VGRPLSTSSEPVLIIKRLTVKLLQHSWSISALSMDPLKILEEFPRWLERLSARHQGNIII
IIDSIDQIQQAERHMKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLDPLSPKDVKSV
INAECLSAEIKLTKEQEKKLERHCRSATTCNALYVTLLAKMITGIKTAWDIDRIIQLCFQ
CQDTVSLYRLVLRAVQETLTAERDKELMKEIVCLVCASHNGVSESELLEMHPDLTSPVLA
SLLHKLQSMCMITYGCGIIKFQHLQAWEAVRLEYMDEEQHSTSMYREKLIKYFSQQLSQD
RVTWRGADELPWLFQQQEEKQKLHRSLLNLFVSQNLYKRGHFSELLSYWQFVGKDKSSMA
AEYFDSLKHYEKNCEGEDSMTRLADLYETLGRFLKDLGLLSQAVAPLQRSLEIRETALDP
DHPSVAHSLHQLAGVYVQWKKFGNAEQLYKQALEISDNAFGSDHTRVARELDSLAMLYQK
QNKYEQADKLRKRSLKIRQKSARQKGNMYGFTLLRRRALQLEELTLGNDTADNAKTLNEL
GVLYYLQNNLETAKMFLTRSLEMRQRVLGPDHPDCAQSLNNLAAIYNEKKENEKAEELYE
SALDIRRRALSPDHPSLAYTIKHLAVLYKRRGKLDKAVPLYELTVEIRQKSFGPQHPSVA
TALVNLAVLYCQVKKHKEALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEEGDFEK
AAELYKRAMEIKEAEPSLVCGKAPSRHSSADTISLRNALHPNVHIDVGHR
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgggcacagcctcctccctggtgagccccggggaggtaattgaggacgcgtatggtggc
gggggtggggaggcctgtgagattcctgtggaggtgaagcccaaagcccggctcctgcgc
agctcattccgccgtggcccacgggtcattggtgccagcttcaagtccacagcttctgtg
gatcttgaatatgctgcagagtacgataggctgaaaaaagactatgatatctttcgggtc
agcaagaacaacgagattgcctcaatgcagaagaaggaagccaagttggacaaggagaac
aaaagactgagagcagaacttcaggctctgcagaaaacataccagaagatactacgagag
aaagagagtgcattagaagctaaataccaggcaatggaaagggctgctacctttgagcat
gacagagacagagtaaagcgtcagtttaaaatttttagagaaacaaaggagaaggagatc
caggacttgctaagagccaaacgggatctagagaccaagctccaaagacttcaggctcag
ggaatccaagtgtacgacccagctgactcggattcagatgacaaccggactgatatgacc
aattcagccacaggcactcactgtgaatactggagtggtggtgttctggggagtgagccc
tctatgggcagcatgatgcaacttcagcagacctttagaggacctgagtttgcacacagc
ttgattgatgtggaaggtccttttgctaatgtgaacagagatgactgggatgcagctgtc
gccagtttgctgcaagtctccccgctggtttcccagtccctttggagtaatacagtgcgt
tgttaccttatgtactcacctgaaacgcaagctgaggtggatgtatttctgaaggaaact
cacaaactgcaaaagttttgtgagggactggggcacttttatctaaatatctactttcct
gaagacagtgccagctgctactcttcagaacggaaggaggaaattgagaaaagctctgtc
tgcgttttatttctaaagtcttttatttctcgctcggtattggaagactgtgaagaagcc
ttctttaaaaatccagaagcaaggctgttcctgatttaccacaggactgtggaccgcgag
cctccttcagccctggcaagagaatttattgaaaaggtcacaaaggcagataaagcaaac
aaggcaaaagtaatagatcactgcggggatccagaggagggagcatataaaacttttaca
cagctggagaaaatcattaaacaggaattgtttggatatgagaacttagactttgagaac
aaggattctgggattgaggatgaccccagcagtcatgaggaggaggactttggagatgtc
ctgtgggatatgcacgatgagcaggagcaaatagaagcttttcagcaagcatcaaagtct
acctgtcagctaggattcgaaaagtacattgaacgactgaatgacatggtggctgcccca
ccacccatccctcctcttcttgtgtcagggggaccaggctctggcaaatctcttctttta
tcaaaatggattgaacttcagcagaagcgctcgccaaacacgctgatcctgtaccatttt
gttggaagacccttgtctaccagttcagagcctgtattaattattaaacggcttactgta
aagctacttcagcattcctggtcaatatctgccttgtcaatggaccccctaaagatactg
gaggaatttccacggtggttggagagactgtctgcccgtcaccaaggcaacatcattatc
attatagattccattgaccagatacagcaagctgaaagacacatgaagtggctaattgac
ccactgcctgtcaatgtcagggtgattgtttctgtaaatgtggagacctgcccacaggct
tggaggttatggccaacactccaccttgatccacttagcccaaaggatgtgaaatctgtt
atcaatgctgaatgcctaagtgccgaaatcaaactaaccaaagagcaggaaaagaaactg
gaaagacattgtcgatctgcaacaacgtgcaatgccttgtatgtgactctgctggccaaa
atgattaccggcatcaaaacagcatgggatattgatagaattatccagctgtgtttccaa
tgccaagacacagtctctctctacaggctggtactgagagctgtgcaggagaccctgact
gcagagagggacaaggaactgatgaaagagattgtttgtctggtctgtgcaagccacaat
ggtgtgagtgaatccgagcttttggagatgcatcctgacctgacctcgccagtgctggct
tcccttctgcacaaactgcaaagtatgtgcatgataacgtatggttgtggaattatcaag
tttcagcatctacaggcttgggaagctgtgagacttgagtacatggatgaagaacaacat
tctacttcaatgtacagagagaagttaataaagtactttagccagcagttaagccaggac
cgggtgacttggaggggtgcggatgaactcccctggctgttccagcaacaggaagagaaa
cagaaactgcacaggagtctgcttaacctgtttgtttcacagaatctttataaaaggggt
catttttcagaactactgagttactggcagtttgtcgggaaagataaaagttccatggca
gcagagtattttgactctctaaagcactatgaaaaaaactgtgagggagaagacagcatg
acacgcttggctgatttatatgaaactctaggacgattcctgaaggacctaggtctcctc
agtcaggctgtggcccccctgcagcgttcgctagagattcgagagaccgcactggatcca
gaccaccccagtgtggctcattctttgcaccagctggctggggtttatgtacagtggaaa
aagtttggaaatgcagagcagctgtacaagcaagctctggaaatcagtgataatgcattt
gggtcagatcacaccagagtggctcgtgaactggattcactcgcaatgctttaccagaaa
cagaacaagtatgaacaagctgacaaattgagaaaaaggtccttaaagataagacagaag
tcagcacgtcagaagggaaacatgtatggtttcactctcctgcggcgccgtgccctgcag
ctggaggagctcacattgggcaatgacactgctgacaacgccaaaacactcaatgagctt
ggagttctctactacttgcagaacaaccttgaaactgccaaaatgtttctgacccggtcc
ctggagatgaggcagcgagtgcttgggccggatcatccggactgcgctcaatctctgaat
aacctggctgctatttacaatgagaagaaagagaatgagaaggcagaggagctgtacgag
agtgccctggacatcaggaggagagcgctctcgcctgatcatccctccctggcatacacc
atcaaacaccttgcagtgctctacaagaggagggggaaactggacaaggctgttcctctg
tatgaactgacagttgaaattcggcagaagtcttttgggcctcaacacccaagtgtggcc
acagctttagtaaacctggctgtactatactgtcaggtgaaaaagcataaagaagctctg
cccctgtatgagcgagctctgaaggtctatgaggacagcctgggtcgcagtcatcccaga
gtgggagagacgctcaagaatctagctgtgttgagttacgaagagggcgattttgaaaaa
gctgctgaactgtataaaagagccatggaaattaaagaagcagagccgtcgctggtttgt
ggaaaagctccttccagacactcaagtgcagacaccatcagcctaagaaatgctcttcat
cccaatgtgcatatagatgttggacacaggtga
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