KEGG   Acipenser ruthenus (sterlet): 117395016
Entry
117395016         CDS       T07327                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    117395016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arut03400]
    117395016
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     117395016
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP NBCH_WD40 Beta-prop_EIPR1 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 WD_LRWD1 Beta-prop_Vps41 WDR54 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_NUP159_NUP214 RAWUL Nucleoporin_N WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 117395016
NCBI-ProteinID: XP_033849734
LinkDB
Position
4:14211166..14239600
AA seq 677 aa
MAAHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPTLNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKEVVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKASVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGIHNFRASGEYDNDCSAPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKGEDLGKIEFDEEIKKQFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFTSPDGSDPKLNLGGLLLQALLEYWPRTHIN
QADEEENEINHVNGEQEPRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQITSASNNEKPGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggctcatcacaggcaaaatgcggctgggcggaggaaagtccaggtgtcctatgta
atacgggatgaagtagagaaatacaatcgcaatggggtgaacgcactgcagctggacccc
acattgaaccggctcttcactgctggccgagactccatcatcagaatctggagtgtgaac
cagcacaagcaagacccctacatagcatcaatggaacatcacacagactgggtcaatgac
atcgtactttgttgtaatggaaagacgttaatatccgcttcatcagacaccactgtcaaa
gtctggaatgcacataaaggattttgcatgtcaacgttgcggacacataaggactatgtg
aaagcgttggcatatgcaaaagataaagaggtggtggcatcggcagggctggacagacag
atattcctttgggatgtaaacaccctcacagcactgactgcctcaaacaacacagtcacc
acttcctccctgagtgggaacaaggactccatctacagtcttgccatgaatcagatggga
acagtaattgtttctgggtccacagagaaggttctgcgagtgtgggacccacggacctgt
gcaaagctaatgaagctgaaaggacacacagacaatgtaaagtctttgttattaaacaga
gatggaacacagtgtttatcaggcagctccgatgggacaatccgcttgtggtccctgggc
cagcagagatgtatagccacgtaccgagtccacgatgaaggggtctgggctctgcaggtc
aacgaggccttcacccacgtttactcgggaggacgggacaggaagatctactgcacagac
ctgcgcaatccagacatcagggtgctcatctgtgaggaaaaggcatcggttctgaagatg
gaactggacagatctgcggacccccctccagctatctgggtgtccaccacaaagtcctcc
gtaaacaaatggtccctgaaaggtattcacaatttccgagcatctggtgaatatgacaat
gactgtagcgctcccctgacaccactgtgcacacaacctgaacaagtgatcaaaggggga
gctagtattattcagtgccacatcctgaatgataagagacacatacttaccaaagacacc
aacaacaatgtggcatattgggatgtacttaaggcctgcaagggagaagatctgggaaag
atagaatttgatgaagaaattaaaaaacagttcaaaatggtgtatgtgccaaactggttc
tcagtagacctgaaaactgggatgctgacaatcactttggatgagagcgactgttttgct
gcctgggtgtctgctaaggatgctgggtttaccagtccagatggttcagatcccaaacta
aacctgggcgggctgttgcttcaagctttgttggaatactggccaagaacacatatcaac
caagcggatgaagaagaaaatgaaataaaccacgttaacggtgaacaggaaccccgaata
cagaaaggaaatgggtatttccaggtgccgccccacacgccggtcatctttggtgaagca
ggggggaggactctgttcagattactgtgtcgagattcagggggtgaaacagagtccatg
cttctcaacgagactgttccacagtgggttattgacatcactgtggataaaaacatgcct
aaattcaacaaaatccctttctacctccaacctcattcctcttcaggggcgaagacatta
aaaaaggatcgactatcggctagcgacatgctgcaggtcaggaaggtgatggaacacgtg
tacgagaagattatcaacctggacaacgagtcccagataaccagcgcctccaataatgaa
aagcctggagagcaggagaaggaggaggacattgccgtgctggcagaggagaagattgag
ctgctgtgtcaggaccaggttttggatccgaacatggacttgagaacagtgaagcatttc
atctggaagagtggcggagacctgaccctccattaccgacagaaatctacgtga

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