Acipenser ruthenus (sterlet): 117395024
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Entry
117395024 CDS
T07327
Name
(RefSeq) low-density lipoprotein receptor-related protein 12-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117395024
Membrane trafficking [BR:
arut04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117395024
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
117395024
NCBI-ProteinID:
XP_033849753
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Position
4:90080172..90093819
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AA seq
864 aa
AA seq
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MALGLVSNKCALLVGKYVHFLIGFSLLGNVVQAEHNENVYVSGISSACGDVPEQIRAQSG
IITSPGWPFEYPDRINCSWYIRTNPGEIITISFQDFEIQSAHRCSSDWISIGTYKNLDGY
RACGSSIPAPYISSQDHVWIKFHSDASETGKGFRLSYITGKPQEPSCDWDQFHCANGKCI
PETWKCNTMDECGDNSDEELCLQSSPTAAYFFEPCAFNQFQCLSRYTRVYTCLPESLKCD
GNIDCQDLGDEIDCDVPTCGEWLRNFYGTFSSPNYPDFYPPGSNCTWIIDTGDQRKVILR
FTDFKLDGTGYGDYVKVYDGLEEHPHKLLRVLTAFDSRAPVTVVSSSGQIRIHFYVDKIN
AARGFNATYQVEGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDEVNCSTCQKDEFPC
TRNGICYLRSDRCNYQNRCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDSQDDCGDGS
DEENCPVIVPTRVITAAVIGSLVCGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAEL
LRREAPPSYGQLIAQGLIPPVEDFPVCSASQASVLENLRLAVRSQLGFTSIRLPMSGRSR
NIWRRLFNFTGSQRTGSLALVSEDLFSDAEDGTAENCTAREPERTGAHTSLHPFDSDDTD
AESERRDVPVAFGGVSALLPQKTPPTTAVEVTVAPSRSATAQQPSRNNTGNAREVGTVEP
PTVGPGRQQLTNAFSRVTQSLRRVSFSLRRSCSTNPNQSPLRQLDHGNGGRDEDDDVELL
IPVSDAASDIDLNDCARPLLELASEQHGQGPIHPHPATLHRTRPPSRDGPCEHCGMVHTA
QIPDACLEAIGKSETSDDEALLLC
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggccctcggtttggtctcaaataaatgtgctctcttggttgggaaatatgtccacttc
ctcatcggtttcagccttttgggaaatgtggtacaagcggagcacaatgaaaatgtgtat
gtttcagggatttccagtgcttgtggagatgttccagagcaaatcagggcacagagtgga
atcatcaccagccctgggtggccatttgaatatccagatagaatcaactgcagttggtat
attagaaccaacccgggtgaaatcataactatcagttttcaggattttgaaatccagagc
gctcacagatgtagctctgattggatctctattggaacatacaaaaaccttgatggctat
cgggcttgtggctcctcaattccagcaccttacatctcttcccaggaccatgtgtggatc
aagtttcattcagatgctagtgagactgggaaaggctttaggctttcttacataacagga
aaacctcaggagcccagctgtgactgggatcagtttcactgtgcaaatgggaaatgcatc
cctgagacttggaagtgcaacacaatggatgaatgtggagacaactcagatgaagagcta
tgtttgcagtccagccccaccgctgcctacttttttgagccttgtgcatttaaccagttc
cagtgtctttcacgctacaccagagtttacacttgccttccagaatcccttaagtgtgat
ggcaacattgactgccaggatttgggagatgagattgactgtgatgttccaacatgtggg
gagtggctcagaaacttctacggtaccttcagctctcccaattatcctgacttctaccca
cctgggagcaactgcacctggattatcgacacaggtgatcagcgtaaggtcattttgcgc
tttacggatttcaagcttgacggtacaggctacggggactatgttaaagtgtatgatggt
ctggaagagcatccccataagcttctgcgtgtcctgacggcatttgactctcgggcaccg
gttacagttgtgtcatcctctgggcaaatccggattcacttctatgtggataagatcaat
gcagctcgtgggtttaatgctacttaccaggtggaaggtttttgcttgccatgggagatc
ccatgcgggggcaactggggctgttacacagagcagcagcgctgtgacggctactggcac
tgtcccaatggcagggatgaggtgaactgcagcacatgccaaaaggatgagttcccatgc
accaggaacgggatctgctacctccgctcagaccgctgcaactaccaaaaccgctgtccc
aatggctctgatgagaagaactgcttcttctgccagccaggcaacttccactgcaaaaac
aaccggtgcgtgttcgagagctgggtctgcgactctcaggatgactgtggagacggcagc
gatgaggagaactgcccagtgattgtcccaacccgggtgatcaccgcagctgttattggg
agtctcgtctgtggtctgctccttgttatagcactcgggtgcacgtgcaaactttattcg
ctgaggatgtttgagcgaaggtcattcgaaacccagctgtcaagggttgaagcagagctg
ctaagaagggaggcacccccctcctacggccaactgattgcacaaggtttgatccctcca
gtggaagatttcccagtgtgctcagcaagccaggcatcagtgttggaaaacctcagacta
gcagtacgttcccagcttggatttacttcaatcagacttccaatgtctgggagaagcagg
aacatttggagacgcctcttcaatttcacagggtctcaacgcactggttccctggcttta
gtctcagaggatctctttagtgatgcagaggatggcactgctgaaaactgcacagccaga
gagcctgaaaggactggtgcacacacaagtcttcatccctttgattctgatgacactgac
gcagagagtgagaggcgggatgtcccagttgcattcggtggagtctctgctttgctacct
caaaagaccccaccaacgaccgcagtggaggttacagtagcaccgtcccgaagtgcaaca
gctcagcagccaagcaggaacaacacaggaaatgcaagagaagttggaactgtcgaacca
cccactgtcggcccaggtagacagcaactaaccaatgcattcagtcgtgtgactcaaagt
cttcgacgggtaagcttctctctcagaagatcctgttcaacaaacccgaaccaaagccct
ttacggcagcttgatcatgggaacggtggaagagatgaagacgacgacgtggaactgttg
attcctgtttctgatgcagcctcagacattgacttgaacgactgtgctaggcctttactc
gaacttgcctcagaacaacatgggcaagggcctatccaccctcatcctgcaacattacac
agaacaaggccacctagcagggatggaccttgtgaacactgtggcatggttcatactgct
cagatacctgatgcatgcttggaagcaattggaaaaagtgaaacaagtgatgatgaggca
ttgctgctttgttag
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