Acipenser ruthenus (sterlet): 117395027
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Entry
117395027 CDS
T07327
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117395027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117395027
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117395027
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117395027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
U-box
zf-Nse
Motif
Other DBs
NCBI-GeneID:
117395027
NCBI-ProteinID:
XP_033849761
LinkDB
All DBs
Position
37:2097326..2100290
Genome browser
AA seq
588 aa
AA seq
DB search
MAYSNPESLFREELSCPICLQLFSEPAMLPCGHNFCASCIEGVIEGEAGRGQHTCPECLS
EYKGKAALRRNVQLCSIVEGFKASESPSSPVLCDMCLETPHPAVRTCLKCEISMCALHLK
PHLEKKTFESHALVEPKSELGINACPVYEDIGNFGCSEDKSCVCISCTIKGKLKKKNLIK
ACSEMKGGLQSKIKIMTEKLNLSQSFLEKGHIHGTSVKAASVENGKTDHPELKLDLESEM
IKKIHLAESLLQKGEKNKASVKVSSAELKQNVSGLFDRIAQLVCTYKEKMLNMIEEEQCY
LVDSLERSTDYITKQQHLCKEIQQQADSILAETDQFQFIQNYQQIQTKLKAALETPLNEK
DVTSQTMHNKKLLESLERTFVEFQAEIRESHQELKVLIYPSELTLDPHTAHCSLSLSEDL
KTVRYTATKQPYPQLPERFDHWRQVLCFQGFSSGEHYWEVDAGEGFWHVGICYKSMARKG
SGTDSKLGCNKASWTVELHGKLSAWHKNVCTRLEVSTQPVKLGVHLNYDAGTLTFLNVSD
KQTHLHTFKARFTEPVYPAFWIQSGTATSWITVRSTTDRDFRTYANIN
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattctaacccagaaagcctctttcgagaagaactgagctgtcctatctgttta
cagctcttttccgagccggctatgctcccctgtggtcacaacttttgtgcttcatgtatc
gagggagtgattgaaggagaagctgggagaggacagcacacctgccctgaatgcctgagt
gagtacaaggggaaagctgcgctgcggagaaacgtccagctttgcagtattgtggaggga
ttcaaagccagtgagagcccctcctctccggtgctctgtgatatgtgcttggagacccca
cacccagctgtcaggacatgtctcaagtgcgagatctcaatgtgtgctctccatttaaaa
ccgcatttggaaaaaaaaacatttgaaagccacgccttggtggagcccaagtcagaactc
ggtatcaacgcatgcccagtgtatgaagacattgggaattttggctgctctgaggacaag
tcctgcgtctgcatctcatgcaccatcaaaggtaagctgaagaaaaaaaatctaataaaa
gcttgttctgaaatgaagggtggactacagtccaagattaaaataatgacagagaagctg
aacctatcgcagagcttcttagagaaggggcacattcatggaacctcagttaaagctgcc
agtgtggaaaatggcaaaaccgatcatcctgaactgaagttggacctggaatcagagatg
ataaagaaaatccatctagcagagagccttctccagaagggggaaaagaataaagcctcg
gtgaaagtttcaagcgcagaattgaaacagaacgtgtcaggcctgttcgaccgcatcgct
caacttgtttgcacttacaaagaaaagatgctaaatatgatagaagaggaacagtgctac
cttgtggacagtctggagcgcagcactgactatattacaaagcaacaacatctctgcaaa
gagatccagcagcaagcggactctatcttggcagaaaccgatcaattccagttcattcag
aattaccagcaaatccagacaaaactaaaagcagcactggaaacccctttaaatgagaaa
gacgttacgagtcaaacgatgcacaataagaaactccttgaaagtctggaaaggacgttt
gtcgagtttcaagctgaaattagagagtcacaccaggagctgaaggttttgatttacccc
tcagagctcacactagacccgcacacagcccactgttcgctgtctctctctgaggatctc
aagactgtcagatacactgctacgaaacagccttacccccagctcccagagaggtttgat
cattggcgccaggtcctgtgtttccagggcttctcatctggagagcattactgggaggtg
gacgctggggagggcttttggcatgtgggaatctgctacaagagcatggcaaggaaaggc
agcggtacagactctaaattagggtgcaataaggcatcctggactgttgagttgcatggg
aagctgtctgcttggcataagaatgtgtgcactcgccttgaggtgtccactcagcccgtc
aagcttggagtgcacttaaattatgatgccgggactctgacatttctcaatgtgtctgac
aaacagacccatctgcacacatttaaagcaagattcaccgaaccagtttatccagcgttc
tggatccaatctggcacagcgacatcttggataactgtaagaagtactacagacagggac
tttcgaacatatgcaaatattaactag
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