Acipenser ruthenus (sterlet): 117395112
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Entry
117395112 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117395112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117395112
Spliceosome [BR:
arut03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117395112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
ATP-synt_10
Motif
Other DBs
NCBI-GeneID:
117395112
NCBI-ProteinID:
XP_034773713
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MSLSKRELDELKPWVEKTVKRVLGFSEPTVVTAALHCVGKGLDKRKTSDQLKPFLDESTS
RFVDKLFEAVEEGRSSRHSKSSSEKHRKRDLKEVFGDDPEITREAVGGGGGGGGGGGGGG
GPVKKKRVPRFEEVEEPEVLPAPPTESPGMLTKMQIKQMMEAATRQIEERKKQLSFVAPV
PAAPVRRISSTRRPEAPPSLSLSLSGQSIAPSQAATFMNDAIEKAKKAAELQARIQSQLA
MKPGILGSLATGTTNLVALANLHAMGIALPRVESRDVTKPSPLILDELGRTVDASGKEIE
LTHRMPTLKANIRAVKREQFKLQLRERPSEELESTAFFDPRVPALPAQRARRGFKFNEKG
RFEKIAQRIRTKAQLEKLQTEIAQAAKKTGIQASTRLALITPKKELTEGEVPELEWWDSY
IFPAGMEPKFENLSNENELFGITNLVEHPAQMSPPVNSDAPVTLGVFLTKKEQKKLRRQT
RREGQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHE
EANAARKLTTEQRKEKKAKKLKEDLSHGVHIAVYRMLKNLRLLIRFXGYKPRLHXGYLTG
TVVLRRDVNVVVVSNGPKAQKKFKRLMLHRIKWDEQRNSKRGDPDGSDDEAAKKTNKCCL
VWEGTAKDRSFGDIKFKQCPTENMAREHFKKHGTEHYWDLALSESVLESTED
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctcaaagagggagctggacgagctcaagccctgggttgagaagacggtgaag
cgagtcctcggcttctctgagcccaccgtggtcacggccgccctgcactgcgtgggcaag
gggctggacaagcgcaagaccagcgaccagctgaagccgttcctggacgagtccacctcc
aggtttgtggacaagctgtttgaggcggtggaggaggggaggagctcccgtcactccaag
tccagcagcgagaaacaccgcaagagagacctgaaggaggtgtttggggatgaccctgag
attacccgtgaggccgtggggggcgggggcgggggcgggggcgggggcgggggcgggggt
ggtccggtgaagaagaagagggtgccccgcttcgaggaggtggaggagcccgaggtcctg
ccagcgccccccacggagagcccgggcatgctcaccaaaatgcagatcaagcagatgatg
gaagccgccacgcgacagatcgaggaacgcaagaagcagctgagcttcgtggctcccgtc
ccagcggctccggtgaggagaatctcaagcacacgcagaccggaggcccccccatctctc
tctctgtctctctctgggcagtccatcgctccctctcaggccgccaccttcatgaacgac
gccatcgagaaggccaagaaggcggcggagctgcaggcgcgcatccaatcacagctcgcc
atgaagccgggcattctgggaagcctggccaccggcaccaccaacctggtggcactggcc
aacctccatgccatgggcatcgcgctgccgagggtggagtcccgggacgtgacgaagccc
tctcccctcatcctggatgagctggggcgcacggtggatgccagtgggaaggagattgag
ctcacgcaccgcatgcccactctgaaggccaacatccgcgcggtgaagcgggagcagttc
aagctgcagctgcgggagcgcccctcggaggagctggagtccaccgccttcttcgacccg
cgcgtgccagccctccccgcgcagagagcccgccgcgggttcaagttcaacgagaagggg
cgcttcgagaagatcgcgcagcgcatccgcaccaaggcccagctggagaagctgcagacg
gagatcgctcaggctgccaagaagactgggatccaggcctccaccaggctggctctcatc
acccccaagaaggagctgacggagggggaggtgccggagctggagtggtgggactcgtac
atcttcccagccggcatggagccaaaatttgagaacctgtctaatgaaaacgaactcttt
gggataaccaacctggtggagcatccagcgcagatgagccctccagtgaactcggacgcg
ccggtgacgctgggcgtcttcctcaccaagaaggagcagaagaagctgaggaggcagacg
aggcgcgaggggcagaaggagctgcaggagaaagtgaggctgggactgatgccccccccg
gagcccaaagtgcggatctccaatctgatgcgagtgctgggaacagaggctgtccaggac
cccactaaagtggaggcgcacgtccgagcacagatggcaaagaggcagaaagctcacgaa
gaggcgaatgcagctcgcaaactgacgacagagcaacggaaagagaagaaagcgaagaaa
ctgaaggaggacctgagccacggggtgcacatagcagtgtacagaatgctcaaaaaccta
aggctcctgataagattttaaggttataagccaagacttcattgagggtacctgactggc
accgtggttctgcgcagggatgtgaacgtcgtcgtggtttctaacggtcccaaagcacag
aagaagtttaagcggttgatgcttcacaggattaaatgggacgaacagagaaactccaag
cgtggcgaccctgacggttcggacgatgaagctgccaagaagactaacaagtgctgcctc
gtgtgggagggcacagcgaaggacagaagcttcggggatatcaaattcaaacagtgcccg
actgagaacatggcccgggaacatttcaaaaagcacggcactgaacactactgggacctg
gcgctgagcgagtcggtcctggagtccacagaggactga
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