KEGG   Acipenser ruthenus (sterlet): 117395331
Entry
117395331         CDS       T07327                                 
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03013  Nucleocytoplasmic transport
arut03015  mRNA surveillance pathway
arut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117395331
  09122 Translation
   03013 Nucleocytoplasmic transport
    117395331
   03015 mRNA surveillance pathway
    117395331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arut03019]
    117395331
   03041 Spliceosome [BR:arut03041]
    117395331
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117395331
Spliceosome [BR:arut03041]
 Complex C
  Other components
   EJC/TREX
    117395331
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 117395331
NCBI-ProteinID: XP_033850082
LinkDB
Position
33:1158988..1164460
AA seq 173 aa
MADVLDLHEEAGAEDFPMDEDETIHKLKEKAKRRKGRGFGSEEGARSRVREDYDTVEQDG
DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNIHLNLDRRTGFLKGYALVEY
ETYKEAQAAMEGLNGQDMMGQPINVDWGFVRGPPKSKRRGGRRRSRSPDRRRR
NT seq 522 nt   +upstreamnt  +downstreamnt
atggcggacgtactcgatttgcacgaagaggccggggccgaggattttcctatggatgaa
gatgaaaccatccacaagttaaaagagaaagcgaagaggagaaagggaagaggctttggt
tcagaggagggcgcgaggtcgagagtgcgtgaggattacgacacagtggagcaagacggg
gatgagccgggcccacagagatctgtggagggctggattctgtttgtgactggagtccac
gaggaagccactgaagaagacatccacgacaaattcgcagagttcggagaaatcaagaac
attcacctgaatctggacaggaggacaggattcctgaagggctatgcgctggtggagtac
gagacttacaaagaagcccaggcagccatggaggggctgaacggccaggatatgatgggt
cagcccatcaacgtggactggggcttcgtaagagggccgcccaagagcaagaggagaggt
gggcggagacgaagcaggagtcctgataggaggcggcgctaa

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