Acipenser ruthenus (sterlet): 117395411
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Entry
117395411 CDS
T07327
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117395411
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
arut04990
]
117395411
Membrane trafficking [BR:
arut04131
]
Protein recycling
Others
Others
117395411
Domain-containing proteins not elsewhere classified [BR:
arut04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117395411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
USP7_C2
SNX17_FERM_C
PDZ_2
RBD
RA_3
Motif
Other DBs
NCBI-GeneID:
117395411
NCBI-ProteinID:
XP_034771860
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MADEAGDGVRSGQTPRNSANSTATAGIAGPCAVASGPRLVRIVKSESGYGFNVRGQVSEG
GQLRSINGELYAPLQHVSAVLPGGAADRAGVSKGDRILEVNGVNVEGATHKQVVELIRAG
DRELLLTVLSVPQHEADSLDPGDEAGQVFHDYSEKQAVPISIPTYKHVELGTEKFVVYNV
YMAGRQLCSKRYREFAILHQNIKKEFGSFTFPRLPGKWPFNLSEQQLDARRRGLEEYLEK
VCSVRVIGESDIMQEFLSESDENYNGVSDVELRVALPDKSTVTVRVKKNSTTDQVYQAVA
SKVGMDSITASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTVNKWLFTTE
EEVLLNDNDLAITYCFHQAMEDVKKGHIKAEEKAYQLQKLAEQKKMGMYLSMLRSCEGYN
EILFPHCACDSRRKGHVITAISVKHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMA
FCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEVTDLDNRNCSKDEYL
PAVEIAQKGWRHLGGEIATS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagcgggagacggggtgcgctccgggcagacgccgaggaacagcgccaac
tccacggcaaccgccgggatagccggcccctgcgccgtggcctcgggtcccaggctggtc
cgaatcgtcaagtcggagtcgggctacggttttaacgtccggggccaggtgagcgaggga
ggccagctccgcagtatcaacggggagctgtacgcgccgctgcagcacgtcagcgccgtc
ctgccgggaggagccgccgacagagccggggtctcgaagggggaccgcattctcgaagtg
aatggtgtgaatgtggagggcgcgactcacaagcaggtggtggagctgatccgggcgggg
gaccgggagctgctcctcaccgtgctgtccgtgccgcagcacgaggctgacagcctggac
cccggggacgaggctggccaggtcttccacgactacagcgagaagcaggctgtgcccatc
tccatccccacctacaagcacgtggagctgggcacggagaagttcgtggtgtacaacgtg
tacatggcaggcaggcagctgtgctccaagcggtaccgcgagttcgccatcctgcaccag
aacatcaagaaagagtttggcagcttcaccttccccaggctgcccgggaagtggcccttc
aacctgtccgagcagcagctggacgcgaggcgccgcggcctggaggagtacctggagaaa
gtctgctccgtgcgagtgatcggggagagtgacatcatgcaggagttcctgtctgaatct
gacgagaattacaatggcgtttcggacgtggagctgagggtagccctgccagacaagtct
accgtgacagtgcgagtgaagaagaacagcaccacggaccaggtctaccaggccgtggcc
tccaaggttggcatggacagcatcacagcgagctactttgccctgtttgaggtgatcaac
cattcgttcgtgaggaagctggctcccaacgagttccctcacaagctgtacgtacagaac
tacacctcggctgtgcccgggacctgcctcactgtcaacaagtggctcttcaccacggag
gaggaggtgctgctcaacgacaacgacctggccatcacctactgctttcaccaggcgatg
gaggatgtgaagaagggccacatcaaggctgaggagaaagcctaccagcttcagaaactg
gcagagcaaaagaagatgggaatgtatctgagcatgctgcgctcgtgcgagggctacaat
gagatcctcttcccgcactgcgcctgtgactcgcggcggaagggtcacgtgatcacggcc
atcagcgtcaagcacttcaaactgcacgcctgcactgaggaggggcagctggagaaccag
gtgattgcgttcgagtgggatgagatgcagcggtgggacactgacgaggagggcatggcg
ttctgctttgagtacgcccgcggagagaagaaaccgcgctgggtcaagatcttcaccccc
tactttaactacatgcacgaatgcttcgagagggtattctgtgaactcaagtggcgaaag
gaggtggaagaggaggtgacagacctggataatcggaattgcagcaaagatgaatatctt
cctgctgttgaaatcgcacagaagggatggagacatctaggaggagagattgcgacatcg
taa
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