Acipenser ruthenus (sterlet): 117395495
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Entry
117395495 CDS
T07327
Name
(RefSeq) aggrecan core protein
KO
K06795
brevican
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
arut00535
]
117395495
00536 Glycosaminoglycan binding proteins [BR:
arut00536
]
117395495
04091 Lectins [BR:
arut04091
]
117395495
Proteoglycans [BR:
arut00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
117395495
Glycosaminoglycan binding proteins [BR:
arut00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
117395495
Lectins [BR:
arut04091
]
C-Type lectins
Lecticans
117395495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
I-set
Ig_3
EGF_2
Motif
Other DBs
NCBI-GeneID:
117395495
NCBI-ProteinID:
XP_034774489
LinkDB
All DBs
Position
Unknown
AA seq
1745 aa
AA seq
DB search
MFLLLLALCPLVLGSIYNSGQGEDDDRTLWVTMSADPLAATPTLGGSLTLPCHFLLSDPT
PASGRRAVLTTPRVKWTVITEGRELEILVARGQRVKVSEEYRERASLPHYPSSPTDLTLR
LDALRTNDSGVYRCQVQQGLEDAHDQAEVKVKGVVFHYRDASSRYVFSFVAAQHACAVIG
ARIATPEQLLAAYHSGFEQCDAGWLSDRTVRYPIQMPRKGCYGDMDGFPGVRNYGLQEPE
ELFDVYCYVENLNGEVFHASSPERLTLEEAKGYCGQQGAELASTGQLYAAWNEGLDNCSP
GWLADGSVRYPITTPRDRCGGSQPGVKTVYLYRNQTGFPDPKSRHDAYCFRGDGTSHTES
PVGYQSTEPEDIKAITTLTDTLQEIQLAREQEEKESEAKGAVDSFPITGDSIEGHEGQGP
LSYSDPYDHMDALQGFEDSSEELPYPTASTNPVPEGSVSFQPTPVTDVDSEVQISQYEVS
GGNPKHYEPMPETNVASGVPTSQYEVSGTIALGVPGEEEIALVEKEAGGTSVEIPIGSGG
NPKHYEPMPETDVASGVTTSQYEVSGVSGEEEIALVEKEAGGTSVEIPIGSGGNPKHYEP
MPETDVASGVTTSQYEVSGVPGEEEIALVEKEAGGTSVEIPIGSGGNPKHYEPMPGTDVA
SGVTTSQYEVSGSGGNPKHYEPMPGTDVASGVTTSQYEVSGVPGEEEIALVEKEAGGTSV
EIPIGSGGNPKHYEPMPGTDVASGVTTSQYEVSGVPGEEEIALVEKEAGGTSVEMPIGSG
GNPKHYEPMPETNVASGEFRFPSMKFQEPSLQKFPGEEEIVLVEQEAGGTSVEMPIGSGG
NPKHYEPMPETDVASGIPTPQYEESGRSSTLYEPESHLAEGPSVTLPPEESSAAPQFPQT
ATDLDDGVSSQPREESGESGAVPQYPGPTAAPENWDSTGIQTQEVVASAGEPESGDLGHV
ASGQPGEEPVDGTGSAGPVDQIPSSQHGAGSAPDQSGYAWPDFPIPEGRDLVSGDERIAL
VEQEAGGTSVEMPMGSADQEGGVESVEQGSASIVGLEPAEETSSAVETSTAWPTEEVYPE
VTPSGASEGDLLSGFPVTLITSLAPSLEVTAAPAWPTEAEASSPSDLETHIPDLGLPSGT
QFPSGEFLHPQEPEGSIDDEKVETWDGSAPEAPTVAPLEHSTSPASYYPEGSVELSGTAE
VELATSLIDLEEPSGVPSGAPTAGLSVEGHQVSGEGSGITEIPFSPKTSGFPQEREETDV
SASLPPATTASVFTVGTYSTAVTGFFQSTASSSQEAAGETSGLPWQESGSGAHPVVSQTE
TPGVTLLLDNTGTPSTFQPSTFQPSTVVPEDSRTTDSEYSGEHSAVPVETDSFAPTSAAP
VPETTTAFGGQTAITTPSYPTQETTDTPSPTTWESTEDLYESTTTALPLPTSTLMPTLDV
YEEATEEALTLKPTLAALPTERAVLGRVVNISDACLDNPCQNGGTCVEEGAHTKCLCLPS
YGGEQCGTDLEHCEAGWEKFQGFCYRHFSKRQGWEVAEQHCRMGGGHLASVMTPEEQDYI
NNKYKEYQWTGLNDKTIEGDFRWSDGNPLLYENWYHGQPDSYFLSGEDCVVMVWHDGGRW
SDVPCNYHLSYTCKKGISSCRQPPVVENARMYGRLRSQYETNSVVRYQCQEGFQQRQNPV
IKCQSDGKWEEPRIICIPANNSNNTSPEEKTGSEPQVQAEEPFREGAATEQAPEIGDLYW
GDEKK
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgctgctgttagccctctgccccctcgtcctgggatccatctacaactcggga
caaggagaagatgatgaccggacactctgggtcacgatgtccgctgaccccctggcggcg
acgcccactctgggcggctccctgaccctcccgtgtcacttcctcctctctgaccccaca
ccggcgtccggccgtcgggctgtgctgaccaccccgcgggtcaagtggacggtcatcaca
gagggccgcgagctggagatactggtggccaggggtcagagggtaaaggtcagcgaggag
tacagggagcgagcctccttgccgcactacccctcctcacccacagacctcacgctgcgt
ctggacgccttgcggaccaacgactcgggggtgtaccgctgccaggtccagcagggactg
gaggatgcacacgaccaggctgaggtgaaggtcaaaggcgtggtgttccactatcgtgat
gcctccagtcgctatgtcttctcgttcgttgctgcccagcatgcctgtgctgtgatcggg
gcgcgcatcgccactccagagcagctcctggctgcctatcacagcgggtttgagcagtgt
gacgcgggctggctgtccgaccggaccgtcagatacccaatccagatgccgcgaaagggt
tgctatggagacatggacggatttcctggtgtgcgaaattatgggctgcaggaaccggag
gaactgtttgacgtttattgctatgtagagaatttaaatggcgaggtcttccacgcctcc
tccccagaacggctcaccctggaggaagcaaaggggtactgcgggcagcagggggcggag
ctggccagtaccggtcaactgtacgcggcctggaacgagggtctggataactgcagcccg
ggctggctggcggacggcagcgtgcggtaccccatcaccacgccacgggatcgctgcggg
ggcagccagcccggggtcaagaccgtgtacctgtaccgcaaccagacaggattcccagac
cccaaatcccgccacgacgcctactgcttcagaggtgacgggacgtcccacacagagtcc
cccgtgggataccaatccaccgaacctgaggatatcaaagccatcacgaccctgacggac
accctgcaggagatacagctggccagggaacaggaggagaaagagagtgaagctaagggg
gcggtggactccttcccaattaccggagacagcatcgagggccacgagggccaggggcca
ctgagctactcagacccctacgaccacatggacgccttgcaagggttcgaggacagctcg
gaggagctcccttacccaacagcctcgaccaatcccgtccctgaaggttccgtgtccttc
cagccgactccagtgacagacgtagattcagaagttcagatttcacagtatgaagtgtca
ggtgggaaccccaaacattacgagcccatgcctgaaacaaatgtagcatctggggtacca
acatcacagtatgaagtttcagggaccatcgctttaggagttccaggagaagaagagata
gcgctggtggaaaaggaagctggcgggacctctgtcgagatacccataggatctggagga
aaccccaaacactacgaacccatgcctgaaacagacgtagcttctggggtaacaacatca
cagtatgaagtttcaggagtttcaggagaagaagagatagcgctggtggaaaaggaagct
ggcgggacctctgtcgagatacccataggatctggaggaaaccccaaacactacgaaccc
atgcctgaaacagacgtagcttctggggtaacaacatcacagtatgaagtttcaggagtt
ccaggagaagaagagatagcgctggtggaaaaggaagctggcgggacctctgtcgagata
cccataggatctggaggaaaccccaaacactacgaacccatgcctggaacagacgtagct
tctggggtaacaacatcacagtatgaagtttcaggatctggaggaaaccccaaacactac
gaacccatgcctggaacagacgtagcttctggggtaacaacatcacagtatgaagtttca
ggagttccaggagaagaagagatagcgctggtggaaaaggaagctggcgggacctctgtc
gagatacccataggatctggaggaaaccccaaacactacgaacccatgcctggaacagac
gtagcttctggggtaacaacatcacagtatgaagtttcaggagttccaggagaagaagag
atagcgctggtggaaaaggaagctggcgggacctctgtcgagatgccgataggatctgga
ggaaaccccaaacattacgagcccatgcctgaaacaaatgtagcttctggggagttccga
tttcccagtatgaagtttcaggaaccatcgcttcagaagttcccaggagaagaagagata
gtgctggtggagcaggaagctggtgggacctccgtcgagatgcccataggatctggagga
aaccccaaacattacgaacccatgcctgaaacagacgtagcttctgggatcccaactccc
cagtatgaagagtctggaaggagttccacgctttatgaaccagaatcccacctcgccgaa
ggaccttctgtaactcttccgcctgaagaatcgagtgcagctccccagttccctcaaact
gccacggatttggacgacggcgtctcgtctcagccacgggaagaatctggagaatctgga
gccgttcctcaataccccgggcccaccgcggcccccgaaaactgggactcgactggaatc
caaacccaggaggttgtggcttcagctggagagcctgaatctggggacctgggacacgta
gcctctggtcaacctggagaagaacccgtggatgggactggttctgctggaccagtggat
cagattcccagttcccagcatggcgctggttccgccccggatcagtccggctacgcctgg
ccagattttccgatccctgaaggaagagacctggtttcaggagatgagcggatagcgctg
gtggagcaggaagccggcgggacctccgtcgagatgcctatgggatccgcggatcaggag
ggcggggtagagtctgtggaacagggatccgcttccatcgtcggcctggagccggcagag
gagacctcgtccgcagtggagaccagcacagcctggcccacggaggaggtctacccagaa
gtcactccgtctggagccagcgagggagatcttctcagcggcttccctgtcactctgatc
acctcactggccccttccctggaggtcacagcggctccagcctggccgacggaagccgaa
gccagctcccctagcgacttggagacccacatcccggatttgggactaccatccggaacc
cagttcccatccggggaattcctgcatcctcaggaaccggaaggatccattgacgatgag
aaggtggaaacctgggatgggagtgcaccggaagcccccaccgtagcccctctggagcac
agcaccagtcctgcctcttactacccggaaggcagcgtggagctttctggaacggcagag
gtggagctagctacaagtctgatcgatctggaggagccttcaggtgtcccctctggggcg
ccaactgcagggctctcggttgaagggcatcaggtttccggcgagggttctgggataacc
gaaattcccttcagcccgaaaacaagcggctttccccaagagagagaagagaccgacgtc
tcagcgagtctgccccccgccaccaccgcctctgtgttcacagtcgggacctacagcaca
gccgtcacgggtttctttcaaagcaccgcctctagctcgcaagaagccgctggagaaacg
tcagggttgccttggcaggaatcggggagcggcgcccacccagtggtctcccagacggaa
accccaggggtcacccttctcctggataacacgggaacgccatccacgttccagccctcc
acgttccagccctccaccgtagtcccggaagattcccgaacgacggattcggagtacagc
ggggagcactccgccgttccggtggagacggactcgtttgcgccgacgtcagcagctccc
gttcccgagacgaccacagctttcgggggccagacagccatcaccacccctagttatccc
acccaagagaccaccgatacgccaagcccgacaacttgggaaagcacggaggacctttac
gaaagtaccactaccgccctgccgttgcccaccagcaccctgatgccaaccctggatgta
tatgaggaggccactgaggaggcccttacccttaaacccactctcgctgctttgcccact
gaaagggcagttttgggccgcgtcgtgaacatttcagacgcctgcctggacaacccctgt
caaaatgggggtacctgcgtggaggagggagcccacaccaagtgtctgtgtcttcccagt
tatggaggagagcagtgcgggacagatctggagcactgcgaggccggctgggagaagttc
caggggttctgctacaggcacttcagtaaacggcagggctgggaggtggcagagcagcac
tgcaggatgggtggggggcacctggccagcgtgatgacccccgaagagcaggactacatt
aacaataagtacaaggagtaccagtggactggactgaacgacaagaccatcgaaggggat
ttccgctggtcagacggcaaccccctgctctatgaaaactggtaccacgggcagcctgac
agctacttcctgtctggagaggactgcgtggtgatggtgtggcacgacggaggccgctgg
agtgacgttccgtgcaactaccatctctcctacacctgcaagaaagggatctcttcctgt
agacagccgcccgtcgtagagaacgcccggatgtacgggaggctccggtctcagtacgag
acgaactcggtggtccggtaccagtgccaggaaggattccagcagaggcagaaccccgtc
atcaagtgccagtccgacgggaagtgggaggagccccggatcatctgtatcccggccaac
aacagcaacaacaccagccctgaagagaagactgggtctgagccccaggtccaggctgag
gagccattcagagagggggcagccacggagcaagcacccgaaataggggacttgtactgg
ggtgatgagaagaagtaa
DBGET
integrated database retrieval system