Acipenser ruthenus (sterlet): 117396785
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Entry
117396785 CDS
T07327
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117396785
04020 Calcium signaling pathway
117396785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117396785
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117396785
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117396785
NCBI-ProteinID:
XP_034783405
LinkDB
All DBs
Position
16:666725..774853
Genome browser
AA seq
2367 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGGSRQGGPQVAPRMYKQSMAQRARTMALYNPIPVKQNC
FSVNRSLFIFSEDNIIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPARDKTPMSA
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGTYLRNGWNVMDFVVVLTGILATIGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEQVVDYPCGTEPPARTCPIGSECREYWIGPNFGITNFDNILFAVLTVFQ
CITMEGWVEILYSANDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
REFLKLRRQQQIERELNGYLEWICKAEEVMLAEEDKNAEEKSPLDVLKRAKTKKSKNDLI
HAEEGEDHFTDITSMGSPFARASLKSGKNESSSYFRRKVKRFRFFIRRMVKAQSFYWAVL
CVVALNTLCVAIVHYDQPQWLTDALYFAEFVFLGLFLTEMTLKMYGLGPRNYFHSSFNCF
DFGVIIGSIFEVIWTAVKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSI
ISLLFLLFLFIVVFALLGMQLFGGHSKTPDTGSNRFNFEEETPTTNFDTFPAAILTVFQI
LTGEDWNAVMYHGIESQGGVRKGMFSSIYFIILTLFGNYTLLNVFLAIAVDNLANAQELT
KDEEELEEQTNQKLALQKAKEVAEVSPMSVTNISIAAFVKQTRGALSRSSSVSSVNSPRE
QQKAMKLMSVWEQRTTQIRRHNLQASCEALYNELDPEERMRLSSLLHIRPDMKTHLDRPL
VVEPRNNVGEAAEKPPAQETTDTAPRKHHRHRDKSAEQQQDKTEVTNENGESNGKEGRHR
SHHSRSKELEGKEGKSERSRSREGGKRHHHQVSVEEGAEKEHRRHRSHRHSAERQAKEGN
GTINNGKGERRPRHKDGSRSTTKEGEAGTKGENGERPEKRHKHRSKAMSTYEGEERKENG
EKEGEAGEKERKNHWPKENQAETEPGTLASTPLQAPGSLKPVEEKPEDSDNQKNVKRTMQ
TMDNTNTVHIPVTITAPPGETTVIPINNIDFETLAKTQEKKNLEDLTRNGPKQILPYSSM
FVFTPSNPVRRLCHYIVNLRYFEMCILVVIVMSSIALAAEDPVEAEAPRNKVLKYLDYVF
TGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSSFMGAHQSVARGT
KGKDLNTIKSLRVLRVLRPLKTIKRLPKLKSVFDCVVNSLKNVLNILIVYMLFMLIFAVI
AVQLFKGKFFYCTDESKELEKDCRGQFLDYEKDEVDAQPREWKKYDFHYDNVLWAFLTLF
TVSTGEGWPTVLKHSVDATYEDQGPSPGFRMEMSIFYVVYFVVFPFFFVNIFVALIIITF
QEQGDKVMSECSLEKNERACIDFAMSARPLTRYMPQNKQAFQYKMWKFVVSPPFEYFIMA
MIALNTVVLMMKFHGAPDVYEAMLKYLNVVFTALFSLECILKIIAFGPLNYLKDAWNVFD
FVTVLGSVTDILVTEIKTTNKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKAL
PYVCLLIAMLFFIYAIIGMQVFGNIALNGDTSINHHNNFRTFFQALMLLFRSATGEAWHE
IMLSCLSKRDCDERSGSDGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRD
SSILGPHHLDEFIRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPNRVAYKRLVK
MNMPIAEDNTVHFTSTLMALIRTALEIKLASGVPNQHQSDAELRKEICTVWPNLSQKTLD
LLVTPHKPNELTVGKVYAALMIFDYYKQNRIKRIQQQQQQQQQQQQQQQQSAGGLAQNKT
GALFQPMLPLTFMQDQKPPLNNVKPSSASLNNGGALPGQEGTSKEPPYWVTERTQEVFQR
SSKRTIERGHSEDTPNSAGVQESVEMRKMDSHGDPQPGLESQGRAASMPRLTAETQRSKS
RSPGSYLAPITDSSPMKRSVSTLTPQRPLEVILQDYSLEPTAPDRTHHHHHHHHHRCHRR
RDKDRKQHSLERSPSRQASKDAGTPGDPASTTLLGEPASRDRGRERGRSHERKHHSSSSE
KQRYYSCDRYGSRDHSQPKSSNPSRSTSPCEGQDRQGSGSVSGSPVMLSSGASTPCRGRR
QLPQTPLTPRPNVTYKTASSSPVQFSAGLPNFSPARLSRGLSEHNALLCGDSQNQSHVAV
TRIGSDPYLGHRNDSDGPEDMLTFEDALASNMGRAPRTSYAVSTPTQPQQSRGVPNGYHY
AVGVNAGPGSGTRGRRYYYEADQDDWC
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggagacgacctaccaacccgctatggaggcggcggtccggccggcgct
gggagagggggaagccggcagggaggcccccaagtcgcgccaaggatgtacaagcagtcg
atggctcaaagggccaggactatggctctctacaaccccatccctgtcaaacaaaactgt
ttttcggttaacagatccctcttcatctttagcgaagacaatatcatacgaaaatatgcc
aaacgaataaccgagtggcctccatttgaatacatgattctagccacaatcatagcaaac
tgcatcgtcctggcgttggaacagcacctaccagcaagggataagacaccgatgtcagcg
agactggacgacacagaaccctacttcattggaatattttgttttgaagctggcataaag
atcattgccctgggctttgcctttcacaaaggcacctacctgcggaatggctggaacgtc
atggatttcgtagtcgtcctgaccggtattttggccacaatcggggcagactttgatcta
aggaccttaagagctgtcagagtgctacggccgctgaaactcgtgtcagggattccaagt
ctccaggtggtcctgaagtctatcatgaaggcgatggtgcccctgctgcagatcgggatg
ctgctcttcttcgctatcgtcatgttcgccatcatcggcttggagttctacatgggcaag
ttccacaagacctgcttcagcaacgaaacaggtgagcaggtggtagattacccctgcggc
accgagccccctgcaaggacctgtcccatcggctcagagtgcagggagtactggatcgga
cccaacttcggcatcaccaacttcgacaacatcctgttcgcagtgctcaccgtcttccag
tgtatcaccatggagggctgggtggagatcctgtacagtgcgaatgacgctgcaggaaac
acatggaactggctgtacttcatcccgctcatcatcatcggctccttcttcatgctcaac
ctggtgctgggagtgctgtccggagagtttgctaaagagcgcgagcgagtggagaagagg
agggagttcctgaagctccgcaggcagcagcagatcgaacgagagctgaacgggtacctg
gagtggatctgcaaggcagaggaagttatgttagctgaagaagataagaacgcagaggag
aaatctcccttggatgttttgaaaagagcgaaaacgaagaagagcaagaacgacctgatc
cacgcggaggaaggggaggaccacttcactgacatcacgtccatgggatctccgttcgca
cgagccagcctgaagagcgggaagaacgaaagctcctcctacttcaggcgcaaggtgaag
aggttccgattctttattcgccgcatggtgaaggcgcagagcttctactgggcagtcctc
tgcgtggtggccctcaacactctctgtgtggccatcgtgcactacgaccagccgcagtgg
ctcaccgacgcactgtatttcgccgagtttgttttcctggggctgtttctgaccgagatg
actttgaaaatgtacgggctgggcccacggaactactttcactcctcgtttaactgtttc
gattttggggtgatcataggcagtatttttgaggtgatctggactgcagtgaagcccgga
gcttcgtttggtattagtgtgctgagagctctgagactgctgaggattttcaaagtgaca
aagtactggaactctctgcgtaacctggtcgtgtctctgctcaactccatgaagtccatc
atcagcctgctcttcctgctcttcctcttcatcgtggtcttcgctctgctgggcatgcag
ctcttcggcggacattccaagacgccggacacgggttccaacaggtttaatttcgaggag
gaaacgccaacaacaaatttcgatacatttcctgccgcgattctcacggtctttcagatc
ctgaccggtgaggactggaatgcagtgatgtatcatgggattgaatcccaaggtggcgtc
cgcaaaggaatgttctcgtccatctatttcatcatcctcaccttgttcggtaactacacg
ctgctcaatgtcttcttggccattgctgttgacaacttggccaatgcacaggaactaaca
aaggatgaggaagaactggaagagcaaaccaatcagaaacttgccctccagaaggccaag
gaggtagcagaagtcagccccatgtcggtcactaacatttccatcgcagcttttgtaaag
caaactcgaggtgctctatctcgcagctcgtccgtctccagcgttaattcacccagggag
cagcagaaggcgatgaagctgatgtcggtgtgggagcagcgcaccacgcagatccggagg
cacaacctgcaggcgagctgcgaggctctgtacaacgagctggaccccgaggaacgcatg
cgactctcctccttgctgcacatccgacccgacatgaagacgcacctggaccgccccctg
gtggtggagccccgcaacaatgtgggggaggcagcagagaaacctccggcccaggaaacc
actgacacggcccccaggaaacaccaccgccaccgggacaaatcggccgagcagcagcag
gacaaaaccgaagtgaccaacgagaacggagagtccaacgggaaagaggggaggcatcgc
tcccaccacagccggagcaaagaactggaaggcaaagaggggaagagcgagcgcagccgg
agcagggaaggggggaagaggcaccaccaccaggtctctgtggaggagggagcggagaag
gagcacaggaggcaccgttctcaccggcactccgccgagcgccaggccaaggagggcaac
ggcaccatcaacaacgggaagggagagaggcgcccccggcacaaggatggttctcgatcc
accaccaaagagggagaggcaggaaccaagggggagaacggggagcggccagagaaacgc
cacaagcaccgctccaaagccatgtccacttacgagggggaggagaggaaggagaacggg
gagaaggagggagaggctggggagaaggagcgcaagaaccactggccaaaggagaatcag
gctgagacagagccaggaaccctggcctccacacccctgcaagccccaggcagcctgaag
ccagtggaggagaagccagaagactcggacaaccagaagaatgtgaagcgaacgatgcaa
acgatggacaacaccaacactgtgcacatccccgtcaccatcacggcaccgcctggggag
accaccgtcatacccatcaacaacattgatttcgaaactttggcaaaaactcaagagaaa
aagaacctggaagatctcaccagaaacggaccgaagcaaatcctgccctacagctccatg
tttgtgttcactccatccaaccctgtgcggaggctgtgccactacattgtgaacctgcgc
tacttcgagatgtgcatcctggtggtgatcgtcatgagcagcatcgccctggcagctgag
gatccagtggaggccgaggctcccagaaacaaggtcctcaaatatctggactacgttttc
acaggagtcttcacgtttgaaatggtgatcaagatgatcgatttgggcctgttgcttcac
cccgggtcttatttccgagacttgtggaacattctggatttcattgtagtcagtggtgcc
ttggtagcgtttgccttttcaagcttcatgggagcacaccaaagtgttgccagaggaacc
aaaggaaaggacctcaacacaatcaaatccctgcgagtactccgagtcctccggccattg
aagacgatcaagcgattgcccaaactgaagtcggtgtttgactgtgtggtaaactctctg
aagaacgtgctcaacatcctgattgtctacatgctcttcatgttaatcttcgctgtcatc
gccgtgcagctcttcaaagggaagttcttctactgcaccgacgagtccaaggagctcgag
aaggactgcaggggtcagtttttggattacgagaaggacgaagtggacgcacagccccgg
gagtggaagaaatatgatttccattatgacaacgtgttgtgggccttcctgacgctcttc
actgtctcaacgggagagggctggccaaccgtcctgaagcactctgtggatgccacctat
gaagaccagggtcccagccccggcttccgcatggagatgtccatcttctacgtagtctac
ttcgtggtcttccccttcttctttgtcaacatctttgtggctttgatcatcatcaccttt
caggagcagggtgacaaagtgatgtcagagtgcagcctggagaagaacgagagggcctgt
attgactttgccatgagtgccaggcctctgacccgctacatgccccagaacaagcaggcc
ttccagtacaagatgtggaagttcgtggtgtcaccccccttcgagtatttcatcatggcc
atgatcgccctcaacactgtggtgctcatgatgaagttccacggagcccccgatgtatat
gaagccatgctgaaatacctgaacgttgtgtttacagctctcttctccttggagtgtatt
ctgaagatcatagcgtttggtccactgaattacttaaaggatgcctggaacgtgtttgac
tttgtcacggtactgggaagtgtcactgacattctggtcaccgaaattaaaacaacgaat
aaactgatcaacctgagtttcctgcggctgttccgagcggcgagactgatcaaactgctc
cggcagggctacaccatccgtatcctgctgtggaccttcgtccagtccttcaaggctctg
ccctacgtctgcctcctcatcgccatgctgttcttcatatatgccatcattggaatgcaa
gtgtttggaaacattgctctgaatggtgatacctcaatcaaccatcacaacaacttccga
acttttttccaggctcttatgctgctgttcaggagcgctacgggggaggcctggcacgag
atcatgctgtcttgtctgagtaaacgtgactgcgacgagcgctcagggtcagacggtaaa
gagtgcggcagcgacttcgcctacttctactttgtgtccttcatcttcctctgctctttc
ctgatgctgaacctctttgtcgctgtcatcatggacaactttgagtacctgactcgagac
tcctccatcctggggcctcatcacctggacgagttcatccgcgtctgggcagagtacgac
cctgcagcctgtggccggatacattataaggatatgtacagtttgttacgtgttatctcg
cctccccttggattagggaagaagtgccctaatagggtggcgtataagcggcttgtgaaa
atgaacatgccgatcgccgaagacaacactgtgcacttcacctccacactcatggccctg
atcagaaccgctctggagatcaagctggcctcaggtgtgccgaatcagcaccagagcgac
gccgaactgaggaaggaaatctgcacagtctggcccaatctttctcagaagacgctggat
ctgttggtgactcctcacaagcctaacgaactgactgtgggtaaggtctacgcagccctg
atgatctttgactactacaagcagaacaggatcaagcggatccagcagcagcagcagcaa
cagcaacagcaacagcaacagcagcagcagtccgcagggggactggcccagaacaagacg
ggcgccctcttccagcccatgttgccgctcaccttcatgcaagaccagaagcctcctctg
aacaacgtgaagcccagctctgcctcgctcaacaacgggggcgcactgcctggacaggaa
gggactagtaaggaacctccatactgggtgacggagcgcactcaggaagtgtttcaacgg
agcagcaagcgtacgatcgagagagggcactctgaggacaccccaaacagcgccggtgtg
caggagtcagtggagatgaggaagatggactcccatggggatcctcagcctgggctagaa
agccagggccgggcagcctccatgccacggctgacagcagagacacagaggagcaagtct
cgatccccggggagttacctagcaccgatcacggactccagtccaatgaagcgctccgtg
tccacgctgaccccacagcgccccctggaggtgatcctgcaggattactctctggagccc
acggcccccgaccggacacaccaccaccaccaccaccaccaccaccgctgccaccggcgc
cgagacaaggacaggaagcagcactcgctcgagaggtcccccagccgccaggctagcaaa
gacgcaggtacgcccggtgacccagcatccaccaccctgctaggggagcctgcgtcgcgg
gacagggggcgcgagagggggcggtcccacgagaggaagcatcactcctcttcctcggag
aagcagcgatactactcctgcgaccgctacgggagccgagaccactcccagcccaaatcc
agcaacccgagccgctccacctccccctgtgagggccaggacagacagggcagtggttca
gttagtgggagcccggtgatgttgagctctggtgcgagcaccccttgccgaggacgcagg
cagctgcctcagacgcccctcaccccccgccctaacgttacctacaagacggccagctcc
tcccctgtgcagttcagcgccggcttgcccaacttctctccggcccggctgagtcgaggc
ttatccgagcacaacgctttgctgtgcggagactcccagaaccaatcccacgtcgctgtg
acccgcatcggctccgacccttacctgggacacaggaacgattctgatgggccagaagac
atgctgaccttcgaggatgctctggcctccaacatgggacgagcccccaggacttcttac
gcggtctccaccccaacgcagccccagcaaagcaggggggttcccaacggctaccattat
gctgtgggtgtcaacgcgggccccggctcgggcactagggggcgccggtactattacgag
gcggaccaagatgattggtgctag
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integrated database retrieval system
