Acipenser ruthenus (sterlet): 117396830
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Entry
117396830 CDS
T07327
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04137
Mitophagy - animal
arut04140
Autophagy - animal
arut04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117396830 (hif1al)
04137 Mitophagy - animal
117396830 (hif1al)
04148 Efferocytosis
117396830 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117396830 (hif1al)
Transcription factors [BR:
arut03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117396830 (hif1al)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
117396830
NCBI-ProteinID:
XP_033850965
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Position
37:complement(10315034..10337640)
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AA seq
530 aa
AA seq
DB search
METEPRGKRPSLELRKVRSRDAARSRRSQETEVFYQLARTLPLPRTVTSHLDKAAIIRLT
LSYLRVQHLLSAEELGVESEEETDGYFLRALPGFVMVLSAEGDVVYLSENVSQHIGVPQL
DLVGQRVFDFIHPCDQEELRDILTPRQRVGKKQSQDVHTERSFFLRMKSTLTSRGRTLSS
KSAAWKVLQCSGHIHTYSSAEPPLTCLTVLCEPIPDPSHIDFPLDRSAFLSRHSMDLCFT
QCDERVTELLGYSPEDLIGHSAYEYHHALDTDHVTKSLQILLSKGQVCTGHYRFLVKHGG
FVWAETQATVLYSNKSTLPEAVVCINFILSGVQDSGIVFSVEQMERPLTPKSKSEPDSVV
METSAELFLKLKESPEELTQLAPSAGDSVEPLTDSAELKMFSFLPARGPSPPAAPQELCT
PELRKLLAPIFDPVAMETSPSLAPSDSLSFDMDKVEKLFAARKEDEAPPTTQEYEGLDLD
MLAPYISMDDDFQLAFLTPNLEPDPPRSGTAKKRALDLDDCPLPKLSALE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaacctagaggaaaaaggcccagcttggagctgcggaaagtgcgttcccgc
gatgctgctcgttcgcgccgcagtcaggagacggaggtgttctaccaactggcgcgcacc
ctgcccctcccccgcactgtgacatcacacctcgacaaggctgccatcataaggctgacc
ctgagctacctgcgtgtgcagcacctcctctcagcagaggagctgggggtggagtcagag
gaggagactgatgggtacttcctgcgcgcactgccaggcttcgtgatggtgctgtcggca
gagggggacgtggtgtacctctccgagaacgtgagccagcacatcggggtgccacagctg
gacctggttgggcagagagtgtttgatttcatccacccctgtgaccaggaggagttgaga
gacatcctgacacccagacagcgtgttggtaagaagcagtcccaggatgttcacactgag
aggagtttcttcctgaggatgaagagcaccctgaccagcagggggcgcaccctcagcagc
aaatcagcagcatggaaggtgcttcagtgttcgggacacatccacacgtacagctctgcg
gagccccccctcacctgcctcactgtgctgtgtgagcccatccccgacccctcacacatc
gacttccccctggacaggagcgccttcctgagccggcacagcatggacctgtgcttcact
cagtgtgacgagagggtcactgagttgctaggatacagtcctgaggatctgattggccac
tccgcctacgagtaccaccatgccctcgacactgatcatgtgactaagagcctgcagatc
ttgctgtcgaaggggcaggtctgcactggtcactatcgcttcctggtcaagcatggcggc
ttcgtgtgggccgagactcaggccaccgtcctctacagcaacaagagcaccctgcccgag
gccgtggtgtgcatcaacttcatcctcagtggggtgcaggactcggggatcgtgttctca
gttgagcagatggagcgacccctgacccccaagtccaagtctgagcctgacagtgttgtt
atggagacgagtgcggagctgttcctcaaactgaaggagagcccagaggagctgacccag
ctagcgccctccgcaggggacagcgtggaaccactcacagactctgctgagctgaagatg
ttctctttcctgcctgctcggggcccctccccccctgcggccccccaggagctctgcacc
ccagaactgcggaagctcctcgcccccatcttcgatcctgtcgccatggagaccagtccc
tccctcgcaccaagtgacagcctctctttcgatatggacaaggttgagaaattattcgct
gcgaggaaggaggatgaggctccgcccacgacccaggagtatgaaggtctcgatctggac
atgctggccccctacatctcgatggacgatgacttccagctcgccttcctgaccccaaac
ctggagccagaccccccccgcagcggcaccgccaagaaacgcgctctggacttggatgac
tgtcccctcccgaagcttagtgccctggagtag
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