Acipenser ruthenus (sterlet): 117396884
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Entry
117396884 CDS
T07327
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03320
PPAR signaling pathway
arut04148
Efferocytosis
arut04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117396884
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117396884
03320 PPAR signaling pathway
117396884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117396884
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
arut03310
]
117396884
Transcription factors [BR:
arut03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
117396884
Nuclear receptors [BR:
arut03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
117396884
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
117396884
NCBI-ProteinID:
XP_034764983
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All DBs
Position
30:13099825..13215504
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AA seq
518 aa
AA seq
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METKPFLSLGFIKPQCSLAPPVERGRHGEAGNSPTVCSCYSGTCPLHQRRISQDSSQMNS
ISLSSPNSHRGMNTSSLHPSLIGAGISPSSLGSSGQLHSPISTLSSPMNGMGSPYSVISS
PMGPHSMTGPSTPGMGFGPSLSPQLNSPMNPVSSSEDIKPPLGLNGVMKVPAHPSMSPLS
LTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKDCMIDKRQRNRCQY
CRYQKCLAMGMKREVLLNAAVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEP
KTETYIETNLGMPSNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAG
WNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDK
TELGCLRAIVLFNPDSKGLSNPGEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPA
LRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaacctttcttgtcattgggattcatcaaaccccagtgctcactagcacca
cctgttgagaggggcaggcatggagaggctgggaattcacccactgtttgctcctgctac
agcggcacgtgcccgcttcaccaacgcagaatatctcaagactcttcacaaatgaactcc
atctccttgagttctccgaattctcatcggggcatgaacacgtcctctctccatccgtcc
ctgattggggcagggatcagcccctcctccctgggctcctcgggccagctgcactctccc
atcagcactttgagctcccccatgaacgggatgggctctccctactccgtcatcagctct
cccatgggcccccactcgatgaccggcccctccacccccggaatgggcttcggacccagc
ctcagtcctcagctcaactctccaatgaaccctgtcagcagctcggaagatattaaacct
ccactgggattgaatggggtgatgaaggtaccagcgcatccttcgatgtccccgttgtct
ctcaccaaacacatctgtgccatctgcggggacaggtcctcaggtaaacattatggagtc
tacagctgcgagggatgcaaaggcttcttcaagaggacggtgaggaaggacctgacctac
acctgcagagacagcaaggactgcatgatcgacaagcgacagcgcaaccgctgccagtac
tgccgctaccagaagtgtctcgccatgggcatgaagagagaagttttgttaaatgcagcc
gtccaggaggagagacagagggggaaagaccgaaacgagaacgaggtggagtcgacgagc
agcgccaacgaggacatgcctgtggagaaaatcctggaggccgaactcgctgtggagcca
aagacagagacgtacatcgagacgaatctggggatgccctcaaactcgccgaacgatccc
gtcaccaacatatgccaagcggcagacaaacagctcttcacgctcgtggaatgggcaaag
agaatcccacacttctcagagctgcccctcgatgaccaggtcatccttctacgagccggg
tggaatgagcttctcattgcctccttctcacaccgctcgatagcggtaaaagacgggatt
ctcctggcaaccgggcttcacgttcatcgcaatagtgcacatagtgccggagtgggagcc
atttttgacagagtgctgacagagctggtatcgaagatgcgggacatgcagatggataag
acagagctggggtgcctgcgagccatcgtcttgtttaacccagactccaaagggctgtcg
aatcctggagaggtggaggcactgcgtgagaaagtctacgcgtcactagaggcctactgc
aaacagaaataccccgagcagcctggcaggtttgccaaactgttactgcgcctgccggcc
ttgcgctccatcgggctgaaatgtctggagcacctcttcttcttcaagctaataggagac
acgcccatcgacacctttctcatggagatgctggaggcgccacaccaaatgacctaa
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