Acipenser ruthenus (sterlet): 117396893
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Entry
117396893 CDS
T07327
Name
(RefSeq) laminin subunit gamma-3-like
KO
K06247
laminin, gamma 3
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04510
Focal adhesion
arut04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117396893
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117396893
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Laminin_B
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
117396893
NCBI-ProteinID:
XP_034783826
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Position
16:complement(3307242..3346603)
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AA seq
1571 aa
AA seq
DB search
MGCFLLGLLLPLLSLKPVRVLGAMDSCWDDLGRANRCMPRFENAVFNRTVIASNVCGSPP
EDYCKQTGSSKSCHRCDAMHPSLHHNATYLNDFHNDEEPTWWQSQSMFHGVQYPNSVNLT
LHLGKSYEISYIRLKFHTSRPESFAIYKRTHEGGSWIPYQYYSATCGKTYRRNGKGYLRP
GEDEQQATCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDHSPVLQDWVTATDLLISLNRL
NTFGDEFFKDPNVLRSYYYAISDFSVGGRCKCNGHASECVSNEIVRLVCNCQHNTAGPDC
EKCQPFFHDRPWARATADSANECLPCNCSGRSEDCHFDAELYRGTGHGGHCVNCRDGTAG
PNCERCKENFHRSSPKDACLPCNCSVVGSSSLQCGGDGNCICKLSVTGEKCDSCQPGYHS
LTEGGCRPCACHPAGSVGLCNPLNGQCSCKENVEGYQCDRCKPGTFNLDSLNPAGCTSCF
CYGHSAACTSAVQYSAFSITSDFTEDLDGWVGEFSDGSESLLIWKEGEVYLLPYTDEDSG
FFKAPGKFLGDKLLSYGQPLSLTFKGESEELLPSFVTLIIEGSGMRMSARLFPQNKTVTD
SHPQQTFVFRLHEGQAGQQIPLSSFEFHRLLSNLTAIKISNAGGHSYTAQLSEVTLVSAA
PGLEPPAPWVEECICPQGYVGQFCEFCAPGYKRETPSDGPFTRCVPCTCNQHGVCDGETG
LCQCRDNTVGPTCERCADGFYGNPLLGTSGDCQPCPCPHQSSCAVIPDTGEVVCTECPPG
QRGNRCEMCDDGFHGDPRGVRGQWKPCRPCQCSGNVDPNAVGVCDHATGRCLKCLHNTEG
DRCERCKDGYYGNALDRETLHKCRPCNCSPSGSVSPSAGCGAQTGQCECLSHVTGRDCGH
CETGFFNLRPGEGCQRCTCNPTGSVSSACHPITGQCSCRPGVEGSACDSCRKGFFSFSAR
GCRACNCSPMGSVTMQCHGNGTCLCREGFVGYKCDQCKVNYFHSRATHQCEECPVCYGLV
RDEAAKLKEKLQALEEELKKYDCQSHRGYEHYPVQKEGSLSNSLEDLLAMQNARDAFLNQ
FMELETSVRTIQERLSNISRDLNCSGAGNDKHCSALNDTGSSIQATQGQLQLARETLDNM
VIPYDLPREPNKWTILVNESQVLAVSQKSLADYMESIAKKALWASKQTLSLLSTIVEGPL
FFDMHEAKANLTESVEETLTEAKKTYSSVQRINTEIAEVLTNITDSHREIPLSDAMRNKT
EELDRLSQSKEELISKAMSELQPQIDSMIKSMESVQQLDPLTARASESQSLALASVVKGK
EVDAEASALLKELEGMKKTWSRKQTQTKVAVKKMRTVKEKILVDAKKKTKQAVNTVIPAV
SNSTQANATAREAQRLATEASADAKAALKQTEKSGRMTTELNSTVSAVLHEVAAQEMKAA
ELKRDMREMEEIAGNMGDVREDMKTAKRSLESYALVLKDLLAKLEISQVNERFESLLNET
ETQLRILQLGVQSEGLGLRIQTLQEAARQQESQMKEMEKDIVEILEEKINLEDIVQNFPE
GCFNRPQTGRQ
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgggctgctttctgctggggttgctgctgcccctgctgtctcttaaacccgtccgtgtt
ttgggagctatggactcctgttgggatgatcttgggcgtgctaaccgctgcatgcccagg
tttgaaaatgctgtttttaacagaactgtgatcgcctccaatgtctgcggctcccctccc
gaggattactgcaagcagactggatcgagcaagtcgtgccaccgctgcgatgccatgcac
cccagccttcaccacaacgccacctacctgaacgacttccacaatgacgaggagcccacc
tggtggcagagtcagtcaatgtttcatggggttcagtaccccaactctgttaacctaact
ctgcacctgggaaagtcctatgaaatcagttacatcagactcaagttccacaccagccgg
ccagagagttttgcaatttacaagaggactcacgagggaggctcctggatcccataccag
tactacagcgccacctgtggcaaaacctacagaagaaacggcaaaggatacctccgccca
ggagaggatgagcagcaggccacctgtacggacgagttcagcgacatctcacccctcacc
ggaggcaatgtggctttctcaactctagaggggcgaccaagtgcctacaactttgaccac
agccctgtgctgcaggactgggtgacagccactgaccttctcatttccttgaaccggctc
aacacctttggggatgaattcttcaaagacccaaatgttctccgatcctactattatgcc
atctcggatttctcagtgggaggcaggtgcaaatgcaatggccatgcaagtgagtgtgta
agcaacgaaattgtgaggcttgtctgtaactgtcagcacaacactgcaggccctgactgt
gagaaatgtcagccttttttccatgacaggccttgggcaagggcaacagctgactcagct
aacgaatgccttccctgtaactgtagcggccgctctgaagactgtcactttgatgctgag
ctgtaccggggcacagggcacggaggccactgtgtgaactgcagggacggcacggctgga
cccaactgtgagaggtgcaaagaaaacttccaccgaagcagcccgaaggacgcctgtctc
ccttgcaattgcagtgtggtcgggtcatcaagtctgcagtgcggaggtgacgggaactgc
atctgcaagctaagtgtaactggggagaaatgtgacagctgtcagccgggataccactca
ctcactgagggtggctgcaggccttgtgcgtgtcacccagctggcagtgtggggttatgt
aaccccctgaatggacagtgcagctgcaaggaaaacgtggaaggatatcagtgtgacagg
tgcaagcctggtacttttaatctagattctctgaatcctgctggctgtaccagttgtttc
tgctatggtcactccgcagcttgtacctcagcagtgcaatactctgcattcagcatcacc
tcagacttcacagaggatctggatggctgggtaggggagttctcagatgggtctgaatcc
ctattgatttggaaggagggagaggtctatttgcttccatacactgatgaagattctggc
ttctttaaagcaccagggaagtttttgggggacaaactcctcagctacggacagcccctc
tctctgacgttcaaaggagaaagcgaggagctcctgccttcctttgtgacgctgataatc
gaaggttcggggatgagaatgtcagcacgtcttttcccgcagaataaaactgtgacagac
tcccatccccaacagacatttgtattcaggcttcacgagggacaggcaggccagcagatc
cctttgtcatcctttgagtttcatcgacttctctccaacctcactgccattaaaataagc
aacgctgggggccacagctatacagcccagctgtcggaggttaccctcgtgtctgcagcc
ccaggactggagcctcctgccccctgggtggaggagtgcatttgcccccaggggtacgtg
gggcagttctgcgagttctgtgccccagggtataaacgagagacccccagcgacggaccc
ttcactcggtgtgtgccttgcacctgcaaccagcatggggtgtgcgatggagagacaggc
ctatgccagtgcagggacaacacggtcgggcctacctgtgagcgctgtgctgacggtttc
tatggaaaccctttacttgggacttccggtgactgtcagccctgcccttgcccgcaccag
tccagctgtgcagtgattccagataccggggaggtcgtctgtacagagtgcccgccaggg
caacgaggaaatcgctgtgaaatgtgtgacgacggtttccatggtgacccgcggggggtc
cgtggccagtggaagccctgccgtccctgtcagtgcagtgggaacgtggaccccaatgcc
gtcggcgtctgcgaccacgcgaccgggcgctgcctcaagtgtctgcacaacacagaagga
gaccggtgtgaacgatgcaaggacggttactacggtaacgcgctagaccgggaaacactc
cacaagtgcaggccttgcaactgcagcccctctggttcagtgagtccgtccgcaggctgc
ggtgcgcagactggtcagtgtgagtgcctgagtcatgtgaccggacgagactgcggacac
tgcgagaccggcttcttcaacctgcggccaggagagggctgtcagagatgcacctgcaac
cccactggttcagtatccagtgcctgtcacccaatcacaggacagtgttcgtgccgccca
ggggtcgaggggtcagcgtgtgactcgtgtcgtaaaggattcttcagcttctctgccagg
ggttgcagggcgtgtaactgctcccccatgggttctgtcaccatgcagtgtcacggcaac
ggcacctgtttgtgtcgggaggggtttgtggggtacaagtgcgatcagtgtaaggtgaac
tacttccacagcagagccacgcaccagtgcgaggagtgcccagtgtgctacggcttggtg
cgagatgaggcagccaaactgaaggaaaagctgcaagctttggaagaggagctgaagaaa
tacgattgccagtctcatagaggctacgaacattaccctgtgcaaaaggagggttccctc
agcaattcactggaggacttactggcaatgcaaaatgccagagacgctttcctgaatcag
tttatggaattggagacgtcggtccggaccatacaagaaaggctgagcaatatcagccgt
gacttgaactgcagcggggcagggaacgataaacactgcagcgctctcaacgacacaggc
tccagcatccaggccacacagggacagctgcagctagccagggaaacactggacaatatg
gtgattccttatgatctccctagggaaccgaacaaatggacaatactagtaaatgaatcc
caggttctagctgtcagtcaaaaatcattggcggattatatggaatcaatagccaaaaag
gctctttgggcttcaaaacaaacattgtccctgctttcaaccattgtggaaggaccattg
ttctttgatatgcatgaagctaaagccaatttaacagagtcagtggaggaaacactgaca
gaagccaagaaaacgtacagttcggtccaaaggattaacactgagattgccgaggtcctg
accaatatcacagactcgcacagggaaatacctctatcggacgcaatgagaaacaagact
gaggagttggatcgattatcacagtctaaagaggaactgatcagcaaagcaatgtcggag
ctccagccacagatagactccatgatcaaaagcatggagagtgtccagcaacttgatccg
ttaacagcccgtgccagtgaatctcagagcctcgccctggcctcggttgtgaaggggaaa
gaagtggacgcagaagccagtgcgttactgaaggagctggagggcatgaagaaaacgtgg
agtcgaaagcaaacccaaaccaaagttgcggtgaagaagatgaggacggtgaaggagaag
atcttggtggatgccaagaaaaagaccaaacaggcagtgaacacggtgatcccagcagtc
tccaactccacccaggctaacgccacagccagggaagcccagagactcgccactgaagca
tccgcagatgcaaaagctgctctcaaacaaactgagaaatccggcagaatgacgactgaa
ttgaactcgactgttagcgctgtccttcacgaagtcgctgcccaggagatgaaagcagca
gagctgaagagagacatgcgggaaatggaagagatagcgggtaacatgggagatgtcagg
gaagacatgaagacagccaagcggtccttggagagttacgcattggtcttgaaggatctg
cttgcaaagttagagatcagccaggtgaacgagaggtttgagagcctcttaaacgagacg
gagactcagctgaggatcctgcagctgggagtgcagagtgaggggctggggctgagaatc
cagacactgcaagaggcagcccgacaacaggagagccagatgaaagagatggagaaggac
atcgtggagatcctggaggagaaaatcaatctggaggacattgtgcagaactttcctgag
ggctgcttcaacaggccgcagacggggagacagtga
DBGET
integrated database retrieval system