Acipenser ruthenus (sterlet): 117396909
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Entry
117396909 CDS
T07327
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X2
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04210
Apoptosis
arut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117396909
09142 Cell motility
04820 Cytoskeleton in muscle cells
117396909
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arut04812
]
117396909
Cytoskeleton proteins [BR:
arut04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117396909
Intermediate filaments
Intermediate filament-binding proteins
117396909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
SH3_9
EF-hand_7
EF-hand_6
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
117396909
NCBI-ProteinID:
XP_033851124
LinkDB
All DBs
Position
16:2950803..2987329
Genome browser
AA seq
2505 aa
AA seq
DB search
MDTSGVKVLETADDIQERRQQVLDRYLRFKELSGLRRQKLEDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANAGAIVKLDETGNQMITEGHFSSDII
RTRLEELHRLWELLLQKTKEKGVRLLQAQKLVQYLRECEDTMDWINDKEAIVTSEELGLD
LEHVEVLQKKFEEFQTDLAAHEERVNDVNQLAGKLTQESHPEAELIVRKQDEVNAAWQRL
KGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVNTLGGEADRLQQTHPQNATQIHLKRDELITNWEQIRTLAAERHARLNDS
YRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKST
DEAGQALLSTGHYASDEVREKLRVLEEERSSLLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHERAQHRRAALEDSFHLQQFFRDSDELKSWINEKMKTASDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKAGQELLNDKHYAAEEVSERMDEVGSLW
KRLLEATEFKGIKLREANQQQQFNRNVEDIELWLYEVEGHLSSDDYGKDLTSVQNLQKKH
ALLEADIAAHQDRIDGITIQARQFQEAGHFDVDNIRKKQEALMTRYEALKDPMVARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRI
KAVSQKGQAMVEEGHFAGDEVKVKLSELNSRWETLKGKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALREQAQSCRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSASRENLLEEQGSISVRQEQIDSQALVTKEAGSVSLRMKQVEELYGSLLEMG
EKRKDMLEKSCKKFMLFREASELQQWINEKEGTLTNEEMGSDLEQVEVLQKKFDDFQKDL
KANESRLRDINKVANELESEGLMTEEAPEVALAQTQQVMLGSAPGVSQDEADSKNTSPWK
SVRMAVQSVANFNAIKELNERWRSLQQLAEERSNLLGSAHEVQRFHRDADETKEWIEEKN
QALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETADRLIQSHPEAVDDIQEK
CTELNQAWNSLVGRADQRKDKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTG
AEALLERHQEHRTEIDARAGTFQAFEQFGQQLLARGHFASPDIKEKLQILDRERADLEKA
WVQRRMMLDQCLELQLFSRDCEQAESWMAAREAFLASDDKGDSLDSTEALIKKHEDFDKA
INVQEEKIATLQSFADQLIAADHYAQGDIANRRNEVLDRWRRLKAQMIEKRSKLGESQTL
QQFSRDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRICG
VIDTGNSLIQRGACAGSEDAVKSRLSTLDDQWQFLVQKSAEKSQKLKEANKQQNFNTGIK
DFDFWLSEVDALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMTSS
AFDTTQVKDKRDAVNSRFAKIKSMAGGRRSKLNESHRLHQFFRDLDDEESWIKEKKLLVS
SEDYGRDLTGVQNLRKKHKRLEAELAAHDPAIQSVLDTGKKLSDDNTIGQEEIQQRLAQF
VEHWKELKDLAAARGKRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGL
LKKHEAFETDFTVHRDRVNDVCVNGDDLIKKNNHHVDNISAKMKALRGKVSELEKAAAQR
KAKLDENSAFLQFNWKADVVESWIGEKENILKTDDYGRDLSSVQTLLTKQETFDAGLQAF
QQEGVTNITALKDQLVAAKHVQSKAIEARHAALMKRWNQLLSNSEARKKKLLEAQEHFRK
VEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALRDAHDAFRSSLSSAQTDFN
QLAELDRQIKSYRVASNPYTWFTMEALEETWRNLQKIIKEREQELQKEQRRQEENDKLRQ
EFAQHANAFHQWLQETRTYLLDGIAYRRVIHVYQYEVGDDLSGRSCMVEESGTLESQLEA
TKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHN
LEQQIQARNTTGVTEEALKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEP
DPEFETILNTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSAESKPYVTKE
ELYQNLSKEQADYCISHMKPYTDSKGRELTSAFDFVEFTRSLFVN
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atggatacgagcggggtgaaggtgctggagacagcggatgatatccaggagaggaggcag
caggtgctcgatcgctacctgcgcttcaaggagctctccgggctgaggaggcagaagctc
gaggactcctaccgctttcagttcttcaggcgcgacgcggacgagctggagaaatggatc
caggagaagctgcagatcgcctccgatgagaactacaaggacccgaccaacctgcagggg
aagctgcagaagcaccaggcgttcgaggctgaagtccaggccaacgcaggcgccatcgtc
aagctggacgagactgggaaccagatgattactgagggacacttctcatccgacatcatc
cgaacccgtctggaggagcttcatcggctctgggagctgctgctgcagaagaccaaggag
aagggtgtgcggctgctgcaggcacagaagctggttcagtacctgcgcgagtgcgaggac
accatggactggatcaatgacaaggaagcgatcgtgacctcggaggagctgggcctggat
ctggagcatgtggaggtcctgcagaagaaattcgaggagttccagacggacctggctgca
cacgaggagcgggtcaatgacgtgaaccagctcgctgggaagctcacgcaggagagccac
ccagaggcagagctgatcgtccgcaagcaggacgaggtgaacgcagcctggcagcgcctc
aagggcctggccctccagaggcagggcaagctgtttggggccgcagaggtgcagcgcttc
aacagggatgtagacgaaacaatcagctggatcaaggagaaggagcagctgatggcttcg
gatgattttgggcgcgacctggcaagtgtccaggcgctgctccgcaagcacgaggggctg
gagagggacctggctgcactggaggacaaggtgaatactctcggcggcgaggctgaccgg
ctgcagcagacccacccgcagaacgcgacccagatccacttgaaacgggacgagctcatc
accaactgggagcaaatccgcaccctggccgctgagagacacgcccgcctgaatgactcc
tacaggctgcagcgtttcctggctgacttccgcgatctcaccagctgggtgacggagatg
aaggctctcatcaacgctgacgagctggccaacgatgtggccggagccgaagccttgctg
gaccggcaccaggagcacaagggagagatcgatgcccatgaagacagcttcaagtccaca
gacgaagccggccaggccctcctctctacgggacactatgcctctgacgaggtccgagag
aagctgcgtgtgctggaggaggagaggtcctccctgctggagctgtgggagctgcgcagg
cagcagtacgagcagtgcatggacctgcagctcttctacagggacacagagcaggtggac
aactggatgagcaagcaggaggctttcctgctgaacgaggacctgggtgactctctggac
agcgtggaggcgctgctgaagaaacacgaggatttcgagaagtctctcagcgcccaggag
gagaagatcacggcgctggatgaatttgccaccaaactaattcagaataaccactacgca
aaggaagatgttgctactcgcagagatgctctgctgagccgtcgcaatgccctgcatgag
cgagcccagcaccgccgcgctgctctcgaggactccttccatctgcagcagttcttccgg
gactcggacgagctcaagagctggatcaacgagaaaatgaaaaccgcctccgacgaggct
tacaaggacccatctaacctacaaggcaaagtacagaaacaccaggccttcgaggctgag
ctctcggccaatcagagtcgcattgacgccctccagaaggcgggccaggagctcttgaat
gacaagcactacgccgcggaagaggtgtccgagcgcatggatgaggtcggctccctctgg
aagagactgctggaggctacggagttcaaaggtattaagctgcgtgaggccaaccagcag
cagcagttcaaccgcaacgtggaggacatcgagctgtggctgtacgaggtggaagggcac
ctatcctccgatgactacgggaaggacctgaccagcgtgcagaacctgcagaagaagcac
gctctgctggaggctgacatcgccgctcaccaggaccgtattgacggcatcaccatccag
gcccgacagttccaggaggccggccactttgacgttgacaacatccgtaagaagcaggag
gcgctgatgactcgctacgaggccctgaaggaccccatggtggcccgcaagcagaagctg
tccgactccctgcggctgcagcagctcttcagagacgtggaggacgaggagacctggatc
agagagaaggagcccatcgcagcctccaccaacaggggcaaagatctcattggtgtccag
aatcttctgaagaagcaccaggctctgcaggctgagatcgccggacacgagcctcggatc
aaagccgtctcccagaaggggcaggccatggtcgaggagggacactttgccggggacgag
gtgaaggtgaagctgagcgagctgaacagccgctgggagaccctgaaggggaaggcgtcc
cagcgccgacaggacctggaggactccctgcaggctcagcagtactttgcggacgccaac
gaggccgagtcctggatgagggagaaggagcccatcgtgggcagcccggactacggcaag
gatgaggactctgcagaggctctgttgaagaagcacgaagccctgatgtctgatctgagc
gcttatggaagcagcattcaagccctgagagagcaggcacagtcttgcaggcaacaagtg
gcccccacggatgacgagactggcaaggagctggtcctggctctgtatgattaccaggag
aagagccctcgtgaagtcaccatgaagaagggagacatcctgactctgctcaacagcacc
aacaaggactggtggaaggtggaggtgaacgaccgccagggcttcgttcctgctgcctat
gtgaagaagctggacccgacccagtccgcctcccgggagaacctgctggaggagcagggc
agcatctccgtgcggcaggagcagatcgacagccaggctctggttactaaggaggccggc
agcgtttccctccgtatgaaacaggtggaggaactgtacggctccctgctggagatggga
gagaagcgcaaggacatgctggagaagagctgcaagaagttcatgctgttccgcgaagcc
agcgagctgcagcagtggatcaacgagaaggaggggacgctcaccaacgaggagatgggg
tccgacctggagcaggtggaggtcctgcagaagaaattcgacgacttccagaaggatctc
aaagctaatgaatcccggctgagggacatcaacaaggtggccaatgagctggagtccgag
gggctgatgacagaggaagctccagaggtagcattggctcagacacagcaggttatgttg
ggttccgcacctggagtctcgcaggatgaagccgactctaaaaacacttctccctggaaa
tctgtacgcatggcggtacagtcggtggctaactttaatgctatcaaggagctgaacgag
cgctggcggtccctgcagcagctggcagaggagaggagcaatctgctgggcagtgcccac
gaggtgcagagattccacagggacgccgatgagaccaaggaatggattgaggagaagaac
caggctttgaacacagataactacggccacgacctggccagcgtgcaagccctgcagcgc
aaacacgagggctttgagagagacctggcggccttgggagacaaggtgaattccctgggt
gagactgcggaccgtctcatccagtctcaccccgaggcagtggatgacatccaggagaag
tgtactgagctgaaccaggcctggaacagcctggtgggccgcgcggaccagcgcaaggac
aagctcggagactctcacgacctgcagcgcttcctcagcgacttcagggacctgatgtcc
tggattaacggaatacgaggtctcgtctcctcggatgagctagcgaaggacgtgactggg
gctgaagctctgctggagagacaccaggagcaccgcacggagatcgatgccagggccggc
accttccaggcgttcgagcagtttgggcagcagctgctggcgcggggtcacttcgccagc
cccgatatcaaggagaagctgcagatcctggaccgggagcgcgcagacctggagaaggcc
tgggtgcagcgcaggatgatgctggatcagtgcctggagctgcagctgttcagccgggac
tgcgagcaggcggagagctggatggcagcccgcgaggcgttcctggccagcgatgataag
ggagactccctggacagcacagaggcgctcatcaagaagcacgaggacttcgacaaggcc
atcaacgtgcaggaggaaaagattgcaaccctgcagtccttcgctgaccagctgattgca
gccgatcattacgcccaaggagacatcgccaaccgacgcaatgaggtcctggacaggtgg
cgccgactgaaggctcagatgatcgagaagaggtccaagctgggtgaatcgcagaccctg
cagcagttcagcagagacgtggacgagatcgaggcgtggatcagcgagaagctgcagact
gccacggacgagtcctacaaagaccccaccaacatccagctgtccaaactgctgagcaaa
caccagaagcaccaggcgttcgaggcagagctccacgccaatgcggaccggatctgcggg
gtcatcgacacggggaactcgctgatccagagaggggcctgcgctgggagcgaggacgca
gtcaagtctcgtctgagcactctggatgaccagtggcagttcctggttcagaaatcggct
gaaaagagccagaaactgaaggaggccaacaaacagcagaacttcaacaccggcatcaag
gactttgacttctggctgtccgaggtcgatgccctcctcgcctctgaggattatgggaag
gacctggcctctgtcaacaaccttctgaagaaacaccagctgctggaggcagacatctct
gcccatgaggatcgtctcaaagacctgaacgggcaggcagacagcctgatgaccagcagt
gccttcgacaccacccaggtgaaggacaagcgcgacgccgtcaacagccgattcgccaag
atcaagagcatggccggcggccgacgctccaagctgaacgagtctcaccgcctgcaccag
ttcttcagggacctggacgatgaggagtcttggatcaaggagaagaagctgctggtgagc
tcggaggattacggccgggatctgaccggagttcagaacctaaggaagaagcacaagagg
ctggaggctgaactggctgcccacgaccctgcaattcagtctgtgctggatactggcaag
aaactctctgatgacaacacgatcggacaggaggagatccagcagcgtctggcccagttt
gtggagcactggaaggagctgaaggaccttgcagccgcccgaggcaagcggctggaggag
tctctggagtaccagcagtttgtggcgaatgtggaggaggaggaagcttggatcaacgag
aaactgaacctggtggggagcgaggactatggagacacgctggccgcagttcagggcttg
ttgaagaagcacgaggcgtttgagacggatttcacagtgcacagggacagagtgaacgac
gtgtgtgtaaatggagatgatctgattaagaagaataatcaccatgtggacaacattagt
gcgaagatgaaggctctgagagggaaggtgtccgagctggagaaggcagcggctcagagg
aaagccaagctggatgagaactctgcgttcctgcagttcaactggaaggcagacgtggtt
gagtcgtggatcggtgagaaagaaaacattctgaagacggatgactatggtcgggatctc
tcctcggtccagacgctcctcactaaacaggagacgttcgatgcagggctgcaggctttc
cagcaggagggcgtcaccaacatcaccgccctgaaggaccagctggtggctgccaagcac
gtgcagtcgaaggccatcgaggcacgccacgccgctctcatgaagcgctggaaccagctg
ctctccaactccgaagcacgcaagaaaaagctgctggaggcacaggagcacttcaggaag
gttgaggacctgttcctgaccttcgccaagaaagcgtccgccttcaacagctggttcgag
aacgcggaggaggacctgacggacccggtgcgctgcaactccctggaggagatccgcgcg
ctgcgggacgcgcacgacgccttccgctcctccctcagctccgcgcagaccgacttcaac
cagctggctgaactggaccgccagatcaagagctaccgcgtcgcctccaatccctacacc
tggttcaccatggaggcgctggaggagacctggaggaacctgcagaagatcatcaaggag
cgtgaacaggagctgcagaaggaacagcgtcggcaggaagagaatgacaaactgcgtcag
gaattcgctcagcacgccaacgccttccaccagtggctgcaggagacgaggacatatctt
ctggacggcatagcctatcgacgggttatccatgtctatcagtatgaagttggggatgat
ctttctggaaggtcctgcatggtggaggagtctggaaccctggagtctcagctcgaggcc
acgaagcgcaagcaccaggagatccgcgccatgcgcagccagctgaagaagatcgaggac
ctgggcgcggccatggaggaggccctgatcctggataacaagtacacggagcacagcacc
gtggggctggcacagcagtgggaccagctcgaccagctgggcatgagaatgcagcacaac
ctggagcagcagatccaagccagaaacacaaccggtgtaacggaagaagccctcaaagaa
ttcagcatgatgttcaagcatttcgacaaggacaagtctgggcgtctgaaccaccaggag
ttcaagtcatgtctgcgctcgctgggctacgacctgcccatggtggaggagggggagcct
gacccagagttcgagaccattctgaacactgtggaccccaacagggatggtcacgtgtcg
ctgcaggagtacatggccttcatgatcagcagggagacggagaacgtgaagtccagcgag
gagatcgagagcgccttccgggcactgagcgccgagagcaagccctacgtcaccaaggag
gagctctaccagaacctgtcaaaggaacaggcagattactgcatctcccacatgaagccc
tacacggacagcaagggcagggagctcacctcggccttcgacttcgtcgagttcacacgc
tcgctcttcgtaaactga
DBGET
integrated database retrieval system
