Acipenser ruthenus (sterlet): 117396914
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Entry
117396914 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec16A-like
KO
K20353
COPII coat assembly protein SEC16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117396914
Membrane trafficking [BR:
arut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117396914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
117396914
NCBI-ProteinID:
XP_033851137
LinkDB
All DBs
Position
16:complement(5981557..6007275)
Genome browser
AA seq
2467 aa
AA seq
DB search
MQPPPRAEPPGAAALPPVGVPNVFRRSSPYSRRANVPMSAAAAPVPPMTDPFAFGRQTPQ
NTPLGNPPPKSSPVPVQGPPPSSFTQPGPIQNQFAPTQTLGSTQGLHSVPSSSAGVNLFT
SNSCVAPSPLPGHFNNSNRFASPTPHVGEQEQLKSREHSPFNVQGSQQNNFVGPPHAAAP
LQNRPPYGQDIRGDPISYNPTVPNAMPFPAQNMQPAATSWMPDYGSCQPSAQNYFQPGEH
PAQQFGVPVPTSSPANIPSQTPPQNQMHSEQQPQVGQQNMTPFLGFVNSHPPPDKTEGSN
PPVSQHHNPPFQSQNHFSQNYGSSNTWFNQPHQEHFYQQPGAAETNFPPTNTGQAGLPPE
GNHIPYESDTGTVSMFFKGNEVENEETLASEKKAMNSVPGGELFLQSQGQPLMGVDVAQN
AAGVHQSFDHYVTGPINALSSCETGPYLNDSAFVSEPQKNAAVHFDNVENLECAPNLEVL
PSNPLNIPPMPQTVPEGAGLGPVPGQENLIPHVADNFEGGPNLETPDSVLDRPVRSESVS
SSYSNVSHGSASSSRRPQGVVGTFIQQEIAKPPQEVSAGYFEQVDSSPAGDAVVQNAANN
VYHRQLSQPPTPSPPKPTGIFQASANSSFEPVRSYSVGVKPVEVDQARMVMEKNSGAQSN
VPRGAVVTDASPGNLEQPPDNLENIFMPTGQPPVGSPSNVLQPISKPTVETVQPLPDRRP
SSRAHAPRLKCESPATTLWAQNEIMPLNILLAPAAPPVHVFKQPSMEIIQPPEDSPLDQP
LEQQAAHKTFISQKADVSSENLENPPQVXEGDHLKQQASFGYATLLVSSPPTESFQNQPI
LIAHPTQNYSVVPPNNPPVSLPNQTDQVSLSEPLKNQGVEDMTVPVSQAPGINLTSGANA
VQPGFLLSTSMPNCQPQLISVTPSLSGIVSNQPINLLIQPPPNQNPLNLTLDSRHGMKPA
AENTYESAAWPSNQAAATDPSNSALGQKANLSVLANNSQSQPAGHHQNATNHVLLDFTMP
RTQANQNQDPNQTNLLSSAGSQPPPPSSQGLRQGAQANNPTGFYLQVTKDAQQSAGTGQA
PQKQTAPASQQTALNPQQSATQPGFHVNEGTTPTQSVQGPGPQNNQYPQSFPLVPGPQGV
GAPNPPMGYGTTGPGGTQHPMYPPQLSSSQPPSLVSSSQQPPQDLQRPTPSHTPQQMYGP
PPQHPAAGYGYYGGGAYPEYPDGRHPYQQPYPPGDPRTAQPYYQEDPYRRYDPRYVRYEG
YNPGYREGNRSQYPEQQERPSSRASQYSDRPSSRQGYSEDNYLKGGRSAYDDYYADYYKK
QYDYGDRSQWDRYDPASYDPRYREYYEQQYWYNYDPEAYRRREQYYSQQYPRREGYDDRW
QYDPRYDSSFDDENAHPRDPYGDEYDRRSVHSEQSAHSVHSSHSQQSRRSSFSSRSQQSQ
VYRSQQDLVTAGYEAPSQPAAPADYSYGQYTDNIGGHQGFTDYQYPAETGWQSVEQVPPR
PVTPEKFTVPHICARFGPGGQLIKVLPNLPSEGQPALVEIHSMETMLQSTQEQEDLRAFP
GPLAKEETHKVDVIKFSQNKAMECLRNDNLLDKDSASLIWEFIVLLCRQNGTVVGTDIAD
LLLRDHKSAWLPGKSPNETNLIDFNNEALDRAEEDPGSGQLSLLSDTFMSVPENAGKETE
RFRELLLFGRKKDSLECAMKHGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVY
QLMSGRMPAAATCCGDEKWGDWRPHLAMVLSNLTNALDLDTRTISTMGDTLASKGLMDAA
HFCYMMAQVGFGVYTKKSTKLVLLGSNHSLPFFKFASNEAIQRTEAYEYAQSLGSQTCLL
PNFQVFKFIYACRLAEVGLSAQAFHYCEVISRTVLKRPSYYSPVFINQLIQMSAKLRFFD
PQLKERPEQELFIEPDWLVRLHQLDDQIKEGAISYNSDRATPQQYACSTPSSEFDHTSQT
DGIGFPQDMTSNTSEIPLMTSLMPNAGPPVPGVQLMPPAPQTILDGAMPSVPSPQYAADV
PFNPGPPQMQPPMQGSAHPSQGPMQGYAPPAMNPDPGFGAPYLPEQSHTQLPPQGSLNEA
LPTVPEQQQNHQPVERRLSSLPSSPTRNAFPPQGHMDFYDQMVHMAPGRRSRSTSQSSMH
MGHGRRSRTTSESSSHSIGRDRRNSAGMQPTPPPPSIPEQPTRKPEQPKKDSPKKGGGGG
WLSWLTRKGKNEAHLPDDKNKSIVWDEKKQRWVNQDEPEEESKPLPPPPPGFPKMGPQMA
QMGPGGPPGSGPQVNMFSRKAAGTRGRYVDILNPGGVGTKPRGPAPAPADLFAPLAPMPI
PANLFVPSAAADGGQSMEGSIAEAEPHTEQSNMDTQFNPAACPPGSEAPVNTDGTQSGEL
SRSSSMSSLSREVSQHFKQAPDQPPAHGGLPAGGVTFYNPSQFMQPAGPSAGTRAGRFSQ
RKYPAMK
NT seq
7404 nt
NT seq
+upstream
nt +downstream
nt
atgcagccacctcctcgagctgaaccccccggggctgccgccctcccacctgtaggggtc
cccaatgtgtttcggagaagcagtccttacagcagaagggcgaatgtaccaatgtcagcg
gcagctgcacctgtgccaccaatgacagacccctttgcgttcggcaggcaaacccctcaa
aacacacctctgggaaatcctccccctaagagcagccctgtccctgtgcaaggaccgcct
ccttcaagtttcacacagccaggcccaatccagaatcagtttgcacccacacagacatta
ggtagtacccagggcctccactctgtaccatcatcatcggctggagttaacctctttacc
tcaaacagctgcgtggctccatcacccctgccaggacattttaataactcaaacagattt
gcctcgccaacccctcatgttggagaacaggaacagcttaaatccagagaacattcaccc
tttaacgtgcaaggatcacaacaaaataactttgtcggtcctcctcatgctgcagcccct
ctccagaacagacctccttacggacaggatatcagaggagatcccatctcttacaacccc
acagtacctaatgcaatgccgttccctgctcagaacatgcagccagcagccacttcatgg
atgccggattacggcagttgtcaaccttcggcccaaaactactttcagcctggtgagcat
ccagcccagcagtttggtgttcctgtgccaacctcatccccagctaatataccatctcag
acacctccccaaaaccagatgcattcagaacaacaaccccaggttgggcagcaaaatatg
acacctttcctaggttttgttaacagtcatccgccaccagacaaaacagaaggaagtaat
ccacctgtttcccaacaccataaccctccatttcaatctcaaaatcacttcagtcaaaac
tatgggtcgtctaatacctggtttaaccagccacaccaagagcatttctaccagcagcct
ggtgcggcagaaaccaacttccctcctactaataccggacaagcagggcttccaccagaa
ggcaaccacattccttatgaatcagatactggaaccgtttcaatgtttttcaaaggtaat
gaagtggaaaatgaagaaactctggcaagtgagaagaaagccatgaacagtgttcccggt
ggagaattgtttctgcaaagccagggtcagccactaatgggtgttgatgtggcacagaat
gcggcaggagtccatcaaagttttgatcattatgtgaccggccctattaatgcactgtcc
agctgtgaaacgggcccctatctgaatgacagtgcttttgtaagtgaaccccaaaagaac
gctgcggtgcactttgacaatgtggaaaacctggaatgtgcacctaatctggaggtttta
cctagcaacccactcaatatcccaccaatgcctcaaactgttcctgaaggtgcagggctt
ggaccagtcccaggccaggaaaatctaattccccacgtagctgataattttgaagggggg
cccaacttggagactccagattctgttcttgatcgtcctgtgcgatctgaaagcgtctct
tccagctacagtaatgtaagtcatggtagcgcatctagttccagaagaccgcaaggagtg
gtgggaacatttatacaacaggaaattgcaaaaccccctcaagaagtctctgccggttat
tttgagcaagttgatagttctcctgcaggagatgcagtcgtacaaaacgctgctaacaat
gtgtatcacagacagctttcccagcctccaacacctagccctcccaaaccaacaggaata
tttcaagctagtgctaacagttcctttgaaccagtcagatcctactcagttggagttaaa
cccgttgaagttgatcaagccaggatggtgatggagaaaaacagtggagcgcaaagcaat
gtcccacgtggggcagtggttacagacgcatcacctgggaatcttgaacagccacctgac
aacctggaaaacatatttatgcccacaggacagccacctgttggtagcccaagtaatgtg
ttacagcccatcagcaagcctacagtagaaacagttcagccactgcctgatagaagacca
tcttctagagcacatgctccacgcttgaaatgcgagagtcctgccactaccctgtgggct
cagaatgagatcatgccactgaacattctcttagctccagctgcccctcctgttcatgtc
tttaagcagccaagcatggagattattcagcccccagaagatagccctttggatcaacca
ttggagcagcaggctgcccacaaaacatttatctcacaaaaggctgatgtgtcttcagag
aatcttgagaaccctcctcaagtgngtgagggtgaccatctgaagcagcaggcaagtttt
ggttatgcaaccctgctggtctcttcacctcccaccgaatcattccagaatcaaccaatt
ttgattgcccatcctactcagaactacagtgtggttcctccaaataatcctcctgtttct
ttacctaatcaaactgatcaagttagcctaagtgaacccttaaaaaaccaaggagtcgag
gacatgactgtgccagtcagccaggctcctggaattaatttgacttctggagccaatgca
gttcaaccggggtttctattgagcacttccatgcctaattgtcaaccacagttaatttct
gtcacaccaagtttatctggaattgtcagcaatcagccaataaacttgttaattcagccg
ccacctaatcaaaatccccttaatttaacactagatagtagacatggcatgaaaccagca
gcagaaaacacttatgagtcagcagcctggccatcaaatcaggcagcagctactgatcct
tccaattcagcgcttggtcaaaaggcgaatctttctgtgttggctaataattctcaaagc
cagcctgctggtcatcaccaaaacgccaccaatcatgtactccttgattttaccatgccc
cgtacacaggccaaccaaaaccaagatcctaatcaaaccaatcttctgtcttctgctggt
tcacaaccgcctccgccctcatcgcagggcttgaggcaaggtgcacaggccaataatcca
acaggtttttatctgcaggttaccaaagatgctcagcagtcagctgggactggacaggca
cctcaaaagcaaacggctccagcttcacagcagactgctttaaacccccagcagtcagct
actcaaccagggttccatgtaaatgaaggcacaacgccaacccaaagcgtgcagggtcca
ggacctcaaaacaaccagtacccacagtcttttcctttggtacctgggcctcaaggagtg
ggagctcctaatccaccaatgggatatggcacgacagggccgggtggcacacagcacccc
atgtaccctccacagctctccagttcacagccgccttcattagtcagttcttcacagcag
cctcctcaagatctgcagcggccaaccccttcacacacacctcagcagatgtacgggccg
ccacctcagcatccagcagcagggtatgggtattatggtggtggggcctatcctgagtat
ccagatggcaggcatccttatcagcagccctatcctcctggtgatccacggactgctcag
ccatactatcaggaggatccatacagaaggtatgaccctcgttacgttcgctatgaaggg
tacaatccaggatatcgggaagggaacaggtctcagtaccctgaacagcaggagcgcccc
agttctagagccagccaatactcggacagaccttcctccagacaaggctattctgaagac
aactatctgaagggtggccgaagtgcctatgatgattattatgcagactactataaaaaa
caatatgactatggagatcgcagccaatgggaccgttatgatccagcttcctatgaccct
cgatatagagaatactatgagcagcagtactggtacaactatgaccctgaggcttaccga
cgaagagagcagtactacagccaacagtatcccagacgggaaggatatgatgatcgctgg
cagtatgatcctcgctacgactccagctttgatgatgagaatgctcacccgagagacccc
tatggggatgagtatgaccgacgcagtgtccacagtgaacagtcagcccacagtgtgcac
agctcacatagtcagcagagccgccgaagcagcttcagctcccgctcacagcagagtcag
gtttacagaagccagcaggaccttgtcactgctggatatgaagccccgagccagcctgcc
gctccagcagattactcctatggacagtacactgacaatataggaggccatcaaggattc
acagactatcagtacccagcagaaacaggatggcaatctgttgaacaagtgcctccaaga
cctgtaactcctgagaagtttacagttcctcacatatgtgccaggtttggtccaggaggt
caattaattaaagttctgcccaacctaccttctgaaggccagcctgctttggtggaaata
catagcatggagaccatgttacagagcacacaagagcaagaagatctgagagcattccca
ggacctcttgccaaggaggaaacccataaagttgatgtaatcaaattttctcagaacaaa
gctatggagtgcctgagaaacgacaatctgcttgataaagattctgcaagtctaatctgg
gagttcattgtattgctctgcaggcaaaatgggactgttgttggaactgatattgctgat
ctcctgctgcgggaccataagtcagcctggctgcctggaaagtcaccaaacgagacgaac
ctgattgattttaacaacgaggccctggaccgagctgaggaggaccctggctctgggcag
ctctccctgctctcggacactttcatgagtgttcctgaaaacgcaggcaaagagacggag
cgcttccgggagctgctcctcttcggccgcaagaaggattctcttgaatgtgcaatgaag
catggattatgggggcatgcgctattacttgccagtaaaatggatagcaggacacatgca
agagttatgaccaggtttgctaacagcctccctattaacgatcctctacagacagtatat
cagctgatgtctggtagaatgcctgccgcagccacttgttgtggagatgagaagtgggga
gactggaggcctcatctggctatggtgctgtcgaatctcactaatgccttggaccttgat
actcgaaccatctctactatgggagacactcttgcctcaaagggactgatggatgcagct
catttctgttatatgatggcccaagttggatttggtgtttatactaagaagtcaactaaa
cttgtcttgttggggtctaatcacagcttgccgttctttaagtttgcctcaaatgaagcc
attcagcgaacagaagcatacgagtatgcacagtctttgggctcccaaacctgtttactt
cctaacttccaggtatttaaatttatatatgcctgccgactagctgaggtgggactttct
gctcaggctttccattactgtgaggtcatttcaagaactgtcctcaagcggccatcctac
tattcacctgtattcatcaaccagctcattcagatgtctgcaaagttgagattctttgac
cctcagttgaaggaaagacctgagcaggagttgtttattgaaccagattggttagttcga
cttcatcagctggatgaccagataaaggaaggtgcaatctcctataattcagaccgagcc
acaccccagcagtatgcttgcagcacccccagctctgagtttgatcataccagccagaca
gatggcattggatttccccaggacatgacctccaatacatcagagatccctctaatgaca
tcgttgatgccaaatgcaggaccaccagtgcctggagtgcagcttatgccaccagctcct
cagactatccttgatggagcaatgccttcggtcccctccccacagtatgctgcagatgtc
ccatttaatccaggtcctcctcaaatgcaacctccaatgcagggctctgcacacccctct
cagggtccaatgcagggctatgctcctccagccatgaaccctgacccaggctttggtgca
ccttatctgccagaacagtctcatacacagttgcctccacaagggtccctcaatgaggca
ctgccgactgtaccagagcagcaacaaaaccatcagccagtggaaaggcgtttaagttcc
ctgccatcctcaccgaccagaaatgctttccctccgcaaggacatatggatttctatgac
caaatggtccacatggccccaggcagaaggtccaggtctacttctcagtcttcaatgcac
atgggacatggaagacggtctcgcacaacatccgagtcttccagtcactcaataggacgt
gacagaagaaactctgctggaatgcagcccaccccacctcctccgtcgattccagaacaa
ccaacacgcaaaccagaacaaccgaagaaggactcgccaaaaaagggcgggggaggagga
tggctcagctggctgactcgaaaaggaaaaaatgaggctcacctaccggacgataaaaac
aaatcgattgtctgggatgagaagaaacagcgctgggttaatcaagatgaacctgaagaa
gagagcaaaccacttccaccacctccccctggtttcccaaagatgggtccacagatggca
caaatggggcctggagggccacccggcagtggtccccaagttaacatgttttcaaggaaa
gctgcaggtacaagaggtcgatatgttgacattctcaaccctggaggagtaggtaccaag
cctcgtggtcctgcccctgccccagcagatttgtttgcacctctggcaccgatgcccatc
cctgcaaacctcttcgtcccgagtgcagctgctgatggtggacagtctatggaaggcagc
attgctgaagcggaaccccatacagaacagagtaacatggacacacagtttaacccagca
gcttgccctcctggctctgaagcacctgtaaatacagacgggacacagtctggggagctc
tcacgttctagctcaatgagttcattatcacgtgaagtgagccagcatttcaaacaggct
cctgatcagccccctgctcatggaggtctacctgcaggaggtgtcactttctataacccc
tctcagtttatgcagccagcaggaccatcggctggcacgagagcggggagattcagccag
agaaaatacccagccatgaagtaa
DBGET
integrated database retrieval system
