Acipenser ruthenus (sterlet): 117397016
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Entry
117397016 CDS
T07327
Name
(RefSeq) whirlin
KO
K21879
whirlin
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
arut03037
]
117397016
Cilium and associated proteins [BR:
arut03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117397016
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
HHD_RTEL1
EF-hand_8
DUF1722
Motif
Other DBs
NCBI-GeneID:
117397016
NCBI-ProteinID:
XP_034765019
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All DBs
Position
30:complement(17767410..17803312)
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AA seq
953 aa
AA seq
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MSTDLERMSLNSSSANSVGYGGRTLSANVRKLHNALNLLLNDLEREQFIHCLNVYHSKRN
VFDLVQTLKVILSTPSKRQLLPMLRLVIPRSDQLLFDQYTSEGLYLKSDLLASNGNPVAA
DSPGKAMPLPGNANALPGHFQPPPLQHRPSSDSFSTTSEGTVPPTPFPGRAAFQETPSDI
RQVSLKRSKNKEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKVFDR
VTHAEAVKVLKGSKKLSLSVSSAGRIPGGYVTNHVYTWVDPQGRSVFPPPDLTEHSSATL
RRKDGERRSNLQLLQEGDEKKVNVVLDDGRSLGLMIRGGAEYALGIYITGVDRGSASESG
GLKVGDQILEVNGYSFLSVPHDEAVRILKSSRHLMMTIKDVGRLPHARTVVDETKWITGS
QIAESATTGSIAGLSDQAAPAAGKPVFYKGVASSQVMLSSLISQSRAMLEEQARHLLNEQ
ERQTMVYYLDEYKEGHIGIQALVMALLELLNTHAKFSLLSEVRGLITPQDLERFDSLVLK
REIESMKARQNSGTVLGTDSYSMVSYADTLTSTGSYFTSTTLSSARNESTLDGSSECLQE
NADSLPDISLDEVQSLAGHPPPFKPPPPPVVSSGGLQRRPSRREQPKRSSSEFSQSGLFF
TAPHTATADSEAASSEAASSEAVSSEQTSLSTSPAPAVSKAEVTAHLSLVNHHPIGPFPR
VKSPTRAKSPEPSFSPSPPPPPSHPAPAPPSPDKPLPQPSPSSSASNQHFVMVEVHRPNS
EPDVNEVKPLPQGRASTLCQLSDSGQTLSEDSGVDIADTGGNSKDSSPLPAKSWGSKDSA
GGEGRTESAPKPPGLLEPTSSLVRVMKSATTLGIAIEGGANTRQPLPRIVTIQRGGSAHN
CGKLKVGHVILEVNGATLRGKEHKDAARMIAEAFKTKEKDYIDFLVTEFNVLL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggatctggaacgcatgtctctgaattcatcctcggccaactccgtgggctac
ggtgggcgaacgctttcagccaacgtgaggaagctgcacaatgccctcaacctgttactg
aacgacttggagcgggagcagttcatccactgcctgaacgtctaccactccaaaagaaac
gtgttcgacctggtccaaactctgaaagtcatactcagcacgccgagcaagcggcagctc
cttcccatgctgcggctggttatccccaggtcggatcagctcctgtttgatcagtacacc
tcggaaggcctctacctgaaatccgatcttctagctagtaacgggaaccccgtggctgca
gatagcccagggaaagcgatgcctttgcccggcaatgctaacgcgctgcccggtcatttc
cagcctccccctctacagcaccgtccgtcctcggacagtttcagcaccaccagcgagggg
acagttccgccgactccttttccagggcgagcggcgtttcaagagacccccagcgatatc
agacaggtgtcgctcaaacgaagtaagaacaaagaaggactcgggttcagcatccgcggc
ggttcggagcacggagtgggcatttatgtgtcgctggtggagccgggatcgctggccgag
aaagagggtctcagggtcggcgatcagatcctgagagtgaacgacaaagtgtttgatcga
gtcacacacgcagaggcggtgaaggttctcaagggctctaagaagctgtctctgtcagtg
agctccgcggggcggatccctggcggctacgtgaccaatcacgtgtacacatgggtggac
ccccagggccgcagcgtgttcccgccccctgacctgaccgagcacagcagcgccaccttg
aggcggaaagacggcgagcggcggagcaacctgcagctacttcaggagggggacgagaag
aaggtgaacgtggtgctggatgatggccgctcgctggggttgatgattcggggcggggct
gagtacgctctggggatctacatcaccggagtggaccggggctctgcgtccgagagtggg
gggctcaaggtgggagatcagatcctagaggtgaacgggtacagtttcctcagcgtgcct
catgatgaggcagtgaggatcctcaagtcctctcggcacctcatgatgaccatcaaggac
gtgggccgcctgccgcacgccaggacagtggtggacgagaccaagtggatcaccggctct
cagatcgcagagagcgccaccacgggcagcatcgctgggttgtctgatcaggctgctccc
gctgctgggaagccggtgttctataagggcgtggccagctcccaggtgatgctgtccagt
ctgatcagccaatcacgcgccatgctggaggagcaggcgcggcacctgctgaacgagcag
gagaggcagaccatggtgtactacctggacgagtacaaggagggacacatcggcatccag
gccctcgtcatggccctgttagagctgctcaacacacacgccaagttctctctgctgtcg
gaggtgcgggggctgatcactccccaggatctggagcgctttgacagcctggttctgaag
agggagatcgagtccatgaaggcgcggcagaactcgggcacggtgctgggcacagactcc
tactccatggtgtcatacgctgacacactcacatccactgggagctacttcacctccacc
acactcagctctgcgcggaatgagagcacgctcgatgggtccagcgaatgcctgcaggag
aatgccgacagtctgcctgacatctctctggatgaagtccagtctctggcgggccaccct
cctcccttcaagcctccgcctcccccagtggtcagttcagggggtctgcagcggcgtccg
agccggagagagcagcccaagcggtcatcgtccgagttctcccagtcaggcctcttcttc
accgctccccacaccgccacagcggacagcgaggcagcgtccagcgaggcagcgtccagc
gaggcagtgtccagcgagcaaacatccctctccacctccccagccccagccgtcagcaaa
gcagaggtgaccgcccacctctcgttggtcaaccaccaccccatcggccccttcccccga
gtcaagtccccgacccgagctaaatcccctgagccctccttctctcccagcccccctcct
cccccttctcaccctgccccagccccacccagtccggacaagcccctcccccagccctcc
ccctcctcctcggcctccaatcagcactttgtcatggtggaggtgcaccgccccaacagc
gagcccgacgtcaatgaagtgaagccgctgccccaaggtagagcctccactctgtgccag
ctctcagacagtggacagacgctgagcgaggacagcggggtggacattgcggacacaggg
ggcaacagcaaggacagcagccccctcccagccaagagctggggcagcaaggacagcgca
gggggcgagggcaggacagagtcagctcctaaaccgcccggtctcttggagcccacttcc
tcactggtgagggtgatgaagagcgccaccacgctgggcatcgccatcgagggaggggcc
aacacacgccagcccctgccccgcatcgtcaccatacagaggggcgggtcggcgcacaac
tgcggcaagctgaaagtgggtcacgtgatcctggaggtgaacggcgccacgctccgaggg
aaggagcacaaggacgcggcgcggatgatcgccgaagcgttcaaaaccaaagagaaagac
tatatcgatttcctggtgaccgagttcaacgtgttgctttag
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